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Protein Folding and Aggregation with ProFASi

In the ProFASi gallery you can find some examples of simulation studies made with ProFASi: Protein Folding and Aggregation Simulator. All pictures and animations in these pages are from simulations I performed using ProFASi, on the computers at the Jülich Supercomputing Centre, at the Forschungszentrum Jülich, Germany. This gallery only shows that there exist at least a few peptides and proteins for which simulations with ProFASi give good results. We do not claim, in particular, that all proteins up to a certain size can be folded with ProFASi.

small peptides Folding and thermodynamics of small peptides
CFr Folding of Top7-CFr
1lq7 Folding of the 67 residue 3 helix bundle GS-α3W
aggregation Aggregation of small peptides
hetero dimer Folding and dimerisation

 


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