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Zeitschriftenbeiträge 2011

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The c-terminal domain of the arabinosyltransferase Mycobacterium tuberculosis EmbC is a lectin-like carbohydrate binding module
PLoS pathogens 7, E1001299 (2011) [10.1371/journal.ppat.1001299]  GO OpenAccess Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Biochemical characterization of the Mycobacterium tuberculosis phosphoribosyl-1-pyrophosphate synthetase
Glycobiology 21, 410 - 425 (2011) [10.1093/glycob/ewq173]  GO Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Comparative 13C-metabolic flux analysis of pyruvate dehydrogenase complex-deficient L-valine-producing Corynebacterium glutamicum
Applied and environmental microbiology 77, 6644 - 6652 (2011) [10.1128/AEM.00575-11]  GO pmc Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Glycosylation is required for outer membrane localization of the lectin LecB in Pseudomonas aeruginosa
Journal of bacteriology 193, 1107 - 1113 (2011) [10.1128/JB.01507-10]  GO pmc Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Biochemical characterisation of aconitase from Corynebacterium glutamicum
Journal of biotechnology 154, (2011) [10.1016/j.biotec2010.07.002]  GO Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Deletion of the aconitase gene in Corynebacterium glutamicum causes strong selection pressure for secundary mutations inactivating citrate synthase
Journal of bacteriology 193, 6864 - 6873 (2011) [10.1128/JB.05465-11]  GO pmc Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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13C Metabolic Flux Analysis Identifies an Unusual Route for Pyruvate Dissimilation in Mycobacteria which Requires Isocitrate Lyase and Carbon Dioxide Fixation
. PLoS PATHOGENS 7, e1002091 (2011) [10.1371/journal.ppat.1002091.2011]  GO Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Diversity-Oriented Production of Metabolites Derived from Chorismate and Their Use in Organic Synthesis
Angewandte Chemie / International edition 50, 7781 - 7786 (2011) [10.1002/anie.201103261]  GO Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Target genes, consensus binding site, and role of phosphorylation for the response MtrA of Corynebacterium glutamicum
Journal of bacteriology 193, 1237 - 1249 (2011) [10.1128/JB.01032-10]  GO pmc Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Visualizing multi-omics data in metabolic networks with the software Omix - A case study
Biosystems 105, 154 - 161 (2011) [10.1016/j.biosystems.2011.04.003]  GO Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Zonal rate model for stacked membrane chromatography. I: Characterizing solute dispersion under flow-through conditions
Journal of chromatography / A 1218, 5071 - 5078 (2011) [10.1016/j.chroma.2011.05.017]  GO Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Mechanism of acetaldehyde-induced deactivation of microbial lipases
BMC biochemistry 12, 1 - 13 (2011) [10.1186/1471-2091-12-10]  GO pmc Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Control of heme homeostasis in Corynebacterium glutamicum by the two-component system HrrSA
Journal of bacteriology 193, 1212 - 1221 (2011) [10.1128/JB.01130-10]  GO pmc Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Determination of flux directions by thermodynamic network analysis: Computing informative metabolite pools
Mathematics and computers in simulation 82, 460 - 470 (2011) [10.1016/j.matcom.2010.10.025]  GO Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Optical sensors for monitoring dynamic changes of intracellular metabolite levels in mammalian cells
Nature protocols 6, 1818 - 1833 (2011) [10.1038/nprot.2011.392]  GO Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Stereoselective Reduction of 2-Hydroxy Ketones towards syn- and anti-1,2-Diols
Advanced synthesis & catalysis 353, 2359 - 2362 (2011) [10.1002/adsc.201100150]  GO Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Single-chain antibody fragment production in Pichia pastoris: Benefits of prolonged pre-induction glycerol feeding
Biotechnology journal 6, 452 - 462 (2011) [10.1002/biot.201000193]  GO Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Ionic liquid facilitates biocatalytic conversion of hardly water soluble ketones
Journal of molecular catalysis / B 68, 147 - 153 (2011) [10.1016/j.molcatb.2010.10.003]  GO Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Conversion of Pyruvate Decarboxylase into an Enantioselective Carboligase with Biosynthetic Potential
Journal of the American Chemical Society 133, 3609 - 3616 (2011) [10.1021/ja110236w]  GO Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Lipoarabinomannan biosynthesis in Corynebacterineae: the interplay of two alpha(1 -> 2)-mannopyranosyltransferases MptC and MptD in mannan branching
Molecular microbiology 80, 1241 - 1259 (2011) [10.1111/j.1365-2958.2011.07640.x]  GO pmc Download fulltext Files BibTeX | EndNote: XML, Text | RIS

(Corresponding author) ; ; ; ; ;
SeSaM-Tv-II Generates a Protein Sequence Space that is Unobtainable by epPCR
ChemBioChem 12(10), 1595 - 1601 (2011) [10.1002/cbic.201100010]  GO Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Stationary versus non-stationary 13C-MFA: A comparison using a consistent dataset
Journal of biotechnology 154, 179 - 190 (2011) [10.1016/j.jbiotec.2010.07.008]  GO Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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The benefits of being transient: isotope-based metabolic flux analysis at the short time scale
Applied Microbiology and Biotechnology 91, 1247 - 1265 (2011) [10.1007/s00253-011-3390-4]  GO Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Hydroxynitrile lyase from Arabidopsis thaliana: Identification of reaction parameters for enantiopure cyanohydrin synthesis by pure and immobilized catalyst
Advanced synthesis & catalysis 353, 2399 - 2408 (2011) [10.1002/adsc.201100199]  GO Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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The pstSCAB operon for phosphate uptake is regulated by the global regulator GlxR in Corynebacterium glutamicum
Journal of biotechnology 154, (2011) [10.1016/j.jbiotec.2010.07.015]  GO Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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S-Selective mixed carboligation by structure-based design of the pyruvate decarboxylase from Acetobacter pasteurianus
ChemCatChem 3, 1587 - 1596 (2011) [10.1002/cctc.201100054]  GO Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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The cytotoxic early protein 77 of mycobacteriophage L5 interacts with MSMEG_3532, an L-serine dehydratase of Mycobacterium smegmatis
Journal of Basic Microbiology 51, 515 - 522 (2011) [10.1002/jobm.201000446]  GO Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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The two-component signal transduction system CopRS of Corynebacterium glutamicum is required for adaptation to copper-excess stress
online available PLoS one 6, e22143 (2011) [10.1371/journal.pone.0022143]  GO OpenAccess Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Increased NADPH availability in Escherichia coli: improvement of the product per glucose ratio in reductive whole-cell biotransformation
Applied Microbiology and Biotechnology 92, 929 - 937 (2011) [10.1007/s00253-011-3374-4]  GO Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Corynebacterium glutamicum as a host for the synthesis and export of D-amino acids
Journal of bacteriology 193, 1702 - 1709 (2011) [10.1128/JB.01295-10]  GO pmc Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Citrate synthase in Corynebacterium glutamicum is encoded by two gltA transcripts which are controlled by RamA, RamB and GlxR
Journal of biotechnology 154, (2011) [10.1016/j.jbiozec2010.07.004]  GO Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Mechanistic pathway modeling for industrial biotechnology: challenging but worthwhile
Current opinion in biotechnology 22, 604 - 610 (2011) [10.1016/j.copbio.2011.01.001]  GO Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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An efficient route to both enantiomers of allo-threonine by simulteneous amino acid racemase-catalyzed isomerization of threonine and crystallization
Advanced synthesis & catalysis 353, 2431 - 2438 (2011) [10.1002/adsc.201100051]  GO Download fulltext Files BibTeX | EndNote: XML, Text | RIS

Dissertationen 2011


Charakterisierung von Proteinen einer neuartigen Signaltransduktionskaskade in Corynebacterium glutamicum
Schriften des Forschungszentrums Jülich : Gesundheit / Health 45, (0) Download fulltext Files BibTeX | EndNote: XML, Text | RIS


Customizable Visualization in the Context of Metabolic Networks
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Novel insights into the energy metabolism of Corynebacterium glutamicum by comprehensive analysis of mutants defective in respiration or oxidative phosphorylation
Schriften des Forschungszentrums Jülich : Gesundheit / Health 57, (0) Download fulltext Files BibTeX | EndNote: XML, Text | RIS


Signaltransduktion in Corynebacterium glutamicum: Studien zur Rolle der FHA-Proteine
Schriften des Forschungszentrums Jülich : Gesundheit / Health 49, (0) Download fulltext Files BibTeX | EndNote: XML, Text | RIS


Metabolic engineering of Corynebacterium glutamicum for efficient succinate production
Schriften des Forschungszentrums Jülich : Gesundheit / Health 47, (0) Download fulltext Files BibTeX | EndNote: XML, Text | RIS


Einfluss intrazellulärer Nukleotid-Cofaktoren auf Redoxreaktionen in rekombinanten Ganzzellsystemen
Schriften des Forschungszentrums Jülich : Gesundheit / Health 42, (2011) Download fulltext Files BibTeX | EndNote: XML, Text | RIS


Der Oxoglutarat-Dehydrogenase-Komplex in Corynebacterium glutamicum und seine Interaktion mit Odhl
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CopRS and CsoR: two regulatory systems involved in copper homeostasis of Corynebacterium glutamicum
Schriften des Forschungszentrums Jülich : Gesundheit / Health 46, (0) Download fulltext Files BibTeX | EndNote: XML, Text | RIS


Transcriptional responses and transcriptional regulators of Gluconobacter oxydans 621H
Schriften des Forschungszentrums Jülich : Gesundheit / Health 51, (2011) Download fulltext Files BibTeX | EndNote: XML, Text | RIS


Untersuchung der L-Cystein-Biosynthese in Escherichia coli mit Techniken der Metabolom- und 13C-Stoffflussanalyse
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Enzyme supported crystallization of chiral amino acids
Schriften des Forschungszentrums Jülich : Gesundheit / Health 40, (2011) OpenAccess Download fulltext Files BibTeX | EndNote: XML, Text | RIS

Abgeschlossene Master-, Bachelor- und Diplomarbeiten 2011

Bachelor Thesis

Evaluierung FRET-basierter Biosensoren als Werkzeuge für die quantitative Metabolitanalytik
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Diploma Thesis

Numerische Verfahren zur Lösung einer Familie hyperbolischer Differentialgleichungen zur Transportmodellierung in Pflanzen
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Master Thesis

Versuchsplanung und Datenauswertung für Hochdurchsatzexperimente mit Genetischen Algorithmen und Kriging-Verfahren
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Bachelor Thesis

Parameterschätzprobleme für Chromatogrphieverfahren
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Master Thesis

Explorative Datenanalyse mittels Klassifikationsverfahren – Vergleich traditioneller Methoden für Anwendungen in der Systembiologie
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Bachelor Thesis

Biochemische Charakterisierung einer NADPH-abhängigen Alkoholdehydrogenase aus Ralstonia sp.®
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Master Thesis

Analysis of the metabolomic stress response induced by heterologous protein expression in Corynebacterium glutamicum
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Bachelor Thesis

Implementierung eines interaktiven MATLAB-Werkzeugs zur Visualisierung Stöchiometrie-basierter Methoden der Netzwerk-Analyse
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Bachelor Thesis

Untersuchung und Verringerung des Leakage während des eiskalten Methanolquenchings
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Bachelor Thesis

Untersuchung der sequenziellen Verknüpfung der Enzyme der Glycolyse bei Escherichia coli
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Bachelor Thesis

Robuste Optimierung unscharfer linearer Probleme - Explorative Studie zur Bestimmung von Stoffflüssen in metabolischen Netzwerken
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Bachelor Thesis

Verbesserung der Expression und Reinigung der w-Transaminase CV2025 aus Chromobacterium violaceum
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Bachelor Thesis

Charakterisierung einer Variante der Hydroxynitril Lyase aus Arabidopsis thaliana
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Bachelor Thesis

Bioprozessentwicklung zur anaeroben Produktion von Succinat in C. glutamicum - Einfluss verschiedener O2-Limitationsprofile auf die Produktivität
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Master Thesis

Corynebacterium glutamicum: Analysis of growth and secretion at different oxygen transfer rates in automated microscale assay and scale-up to stirred tank reactor
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Diploma Thesis

Conception and realisation of a test setup to analyse the behaviour of E. coli in a microfluidic chip
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Master Thesis

Establishment of high throughput enzyme analytics on an automated liquid handling platform to characterize the central metabolism of Corynebacterium glutamicum
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Master Thesis

Informationsvisualisierung im Kontext biochemischer Netzwerke unter Verwendung von 3D Techniken
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Master Thesis

Scale up of optimized fed-batch process for heterologous protein secretion by Corynebacterium glutamicum
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Master Thesis

Development and Fabrication of Microfluidic Systems for Single Cell Analysis
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Beiträge in Büchern 2011

Contribution to a conference proceedings/Contribution to a book
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A Hybrid Parallelization Approach for Cloud-enabled Metabolic Flux Analysis Simulation Workflows
Gerevieweter Tagungsband, Proceedings des 4. Workshop Grid- und Cloud-Technologien für den Entwurf technischer Systeme - Grid4TS, Dresden, 2011. - ISSN 1862-622X. - S. 30 - 33 Download fulltext Files BibTeX | EndNote: XML, Text | RIS

Contribution to a conference proceedings/Contribution to a book
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An online provenance service for distributed metabolic flux analysis workflows
2011 Ninth IEEE European Conference on Web Service, 2011. - 978-0-7695-4536-3/11. - S. 91 -98 Download fulltext Files BibTeX | EndNote: XML, Text | RIS

Book
(Corresponding author)
Metabolische 13C-Stoffflussanalyse: vom isotopisch stationären zum instationären Fall
Schriften des Forschungszentrums Jülich. Reihe Gesundheit / health 39, Getr. Pag. (2011)
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Contribution to a conference proceedings/Contribution to a book
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Single Cell Trapping and Analysis of Prokaryotic Production Strains in sub µm Fluidic Structures
Proceedings of 15th International Conference on Miniaturized Systems for Chemistry and Life Sciences, October 2-6, 2011, Seattle, Washington, USA, ISBN 978-0-9798064-4-5 Download fulltext Files BibTeX | EndNote: XML, Text | RIS

Dissertation / PhD Thesis/Book

Einfluss intrazellulärer Nukleotid-Cofaktoren auf Redoxreaktionen in rekombinanten Ganzzellsystemen
Schriften des Forschungszentrums Jülich : Gesundheit / Health 42, (2011) Download fulltext Files BibTeX | EndNote: XML, Text | RIS

Dissertation / PhD Thesis/Book

Transcriptional responses and transcriptional regulators of Gluconobacter oxydans 621H
Schriften des Forschungszentrums Jülich : Gesundheit / Health 51, (2011) Download fulltext Files BibTeX | EndNote: XML, Text | RIS

Contribution to a conference proceedings/Contribution to a book

Thesenpapier zum Status der Synthetischen Biologie in Deutschland
Thesenpapier, DECHEMA, Arbeitskreises Systembiologie und Synthetische Biologie Frankfurt, 2011. S. 1 - 23 Download fulltext Files BibTeX | EndNote: XML, Text | RIS

Dissertation / PhD Thesis/Book

Enzyme supported crystallization of chiral amino acids
Schriften des Forschungszentrums Jülich : Gesundheit / Health 40, (2011)
OpenAccess Download fulltext Files BibTeX | EndNote: XML, Text | RIS


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