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Journals 2011

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The c-terminal domain of the arabinosyltransferase Mycobacterium tuberculosis EmbC is a lectin-like carbohydrate binding module
PLoS pathogens 7, E1001299 (2011) [10.1371/journal.ppat.1001299]  GO

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Biochemical characterization of the Mycobacterium tuberculosis phosphoribosyl-1-pyrophosphate synthetase
Glycobiology 21, 410 - 425 (2011) [10.1093/glycob/ewq173]  GO

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Comparative 13C-metabolic flux analysis of pyruvate dehydrogenase complex-deficient L-valine-producing Corynebacterium glutamicum
Applied and environmental microbiology 77, 6644 - 6652 (2011) [10.1128/AEM.00575-11]  GO

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Glycosylation is required for outer membrane localization of the lectin LecB in Pseudomonas aeruginosa
Journal of bacteriology 193, 1107 - 1113 (2011) [10.1128/JB.01507-10]  GO

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Biochemical characterisation of aconitase from Corynebacterium glutamicum
Journal of biotechnology 154, (2011) [10.1016/j.biotec2010.07.002]  GO

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Deletion of the aconitase gene in Corynebacterium glutamicum causes strong selection pressure for secundary mutations inactivating citrate synthase
Journal of bacteriology 193, 6864 - 6873 (2011) [10.1128/JB.05465-11]  GO

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13C Metabolic Flux Analysis Identifies an Unusual Route for Pyruvate Dissimilation in Mycobacteria which Requires Isocitrate Lyase and Carbon Dioxide Fixation
. 7, e1002091 (2011) [10.1371/journal.ppat.1002091.2011]  GO

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Diversity-Oriented Production of Metabolites Derived from Chorismate and Their Use in Organic Synthesis
Angewandte Chemie / International edition 50, 7781 - 7786 (2011) [10.1002/anie.201103261]  GO

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Target genes, consensus binding site, and role of phosphorylation for the response MtrA of Corynebacterium glutamicum
Journal of bacteriology 193, 1237 - 1249 (2011) [10.1128/JB.01032-10]  GO

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Visualizing multi-omics data in metabolic networks with the software Omix - A case study
Biosystems 105, 154 - 161 (2011) [10.1016/j.biosystems.2011.04.003]  GO

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Zonal rate model for stacked membrane chromatography. I: Characterizing solute dispersion under flow-through conditions
Journal of chromatography / A 1218, 5071 - 5078 (2011) [10.1016/j.chroma.2011.05.017]  GO

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Mechanism of acetaldehyde-induced deactivation of microbial lipases
BMC biochemistry 12, 1 - 13 (2011) [10.1186/1471-2091-12-10]  GO

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Control of heme homeostasis in Corynebacterium glutamicum by the two-component system HrrSA
Journal of bacteriology 193, 1212 - 1221 (2011) [10.1128/JB.01130-10]  GO

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Determination of flux directions by thermodynamic network analysis: Computing informative metabolite pools
Mathematics and computers in simulation 82, 460 - 470 (2011) [10.1016/j.matcom.2010.10.025]  GO

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Optical sensors for monitoring dynamic changes of intracellular metabolite levels in mammalian cells
Nature protocols 6, 1818 - 1833 (2011) [10.1038/nprot.2011.392]  GO

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Stereoselective Reduction of 2-Hydroxy Ketones towards syn- and anti-1,2-Diols
Advanced synthesis & catalysis 353, 2359 - 2362 (2011) [10.1002/adsc.201100150]  GO

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Single-chain antibody fragment production in Pichia pastoris: Benefits of prolonged pre-induction glycerol feeding
Biotechnology journal 6, 452 - 462 (2011) [10.1002/biot.201000193]  GO

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Ionic liquid facilitates biocatalytic conversion of hardly water soluble ketones
Journal of molecular catalysis / B 68, 147 - 153 (2011) [10.1016/j.molcatb.2010.10.003]  GO

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Conversion of Pyruvate Decarboxylase into an Enantioselective Carboligase with Biosynthetic Potential
Journal of the American Chemical Society 133, 3609 - 3616 (2011) [10.1021/ja110236w]  GO

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Lipoarabinomannan biosynthesis in Corynebacterineae: the interplay of two alpha(1 -> 2)-mannopyranosyltransferases MptC and MptD in mannan branching
Molecular microbiology 80, 1241 - 1259 (2011) [10.1111/j.1365-2958.2011.07640.x]  GO

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SeSaM-Tv-II Generates a Protein Sequence Space that is Unobtainable by epPCR
ChemBioChem 12(10), 1595 - 1601 (2011) [10.1002/cbic.201100010]  GO

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Stationary versus non-stationary 13C-MFA: A comparison using a consistent dataset
Journal of biotechnology 154, 179 - 190 (2011) [10.1016/j.jbiotec.2010.07.008]  GO

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The benefits of being transient: isotope-based metabolic flux analysis at the short time scale
Applied Microbiology and Biotechnology 91, 1247 - 1265 (2011) [10.1007/s00253-011-3390-4]  GO

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Hydroxynitrile lyase from Arabidopsis thaliana: Identification of reaction parameters for enantiopure cyanohydrin synthesis by pure and immobilized catalyst
Advanced synthesis & catalysis 353, 2399 - 2408 (2011) [10.1002/adsc.201100199]  GO

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The pstSCAB operon for phosphate uptake is regulated by the global regulator GlxR in Corynebacterium glutamicum
Journal of biotechnology 154, (2011) [10.1016/j.jbiotec.2010.07.015]  GO

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S-Selective mixed carboligation by structure-based design of the pyruvate decarboxylase from Acetobacter pasteurianus
ChemCatChem 3, 1587 - 1596 (2011) [10.1002/cctc.201100054]  GO

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The cytotoxic early protein 77 of mycobacteriophage L5 interacts with MSMEG_3532, an L-serine dehydratase of Mycobacterium smegmatis
51, 515 - 522 (2011) [10.102/jobm.201000446]  GO

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The two-component signal transduction system CopRS of Corynebacterium glutamicum is required for adaptation to copper-excess stress
online available PLoS one 6, e22143 (2011) [10.1371/journal.pone.0022143]  GO

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Increased NADPH availability in Escherichia coli: improvement of the product per glucose ratio in reductive whole-cell biotransformation
Applied Microbiology and Biotechnology 92, 929 - 937 (2011) [10.1007/s00253-011-3374-4]  GO

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Corynebacterium glutamicum as a host for the synthesis and export of D-amino acids
Journal of bacteriology 193, 1702 - 1709 (2011) [10.1128/JB.01295-10]  GO

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Citrate synthase in Corynebacterium glutamicum is encoded by two gltA transcripts which are controlled by RamA, RamB and GlxR
Journal of biotechnology 154, (2011) [10.1016/j.jbiozec2010.07.004]  GO


About Theory and Models in Biology - A personal reflection after 25 years of Theoretical Biology at the University of Bonn
14, 152 - 155 (2011)  GO

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Mechanistic pathway modeling for industrial biotechnology: challenging but worthwhile
Current opinion in biotechnology 22, 604 - 610 (2011) [10.1016/j.copbio.2011.01.001]  GO

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An efficient route to both enantiomers of allo-threonine by simulteneous amino acid racemase-catalyzed isomerization of threonine and crystallization
Advanced synthesis & catalysis 353, 2431 - 2438 (2011) [10.1002/adsc.201100051]  GO

Dissertations 2011


Charakterisierung von Proteinen einer neuartigen Signaltransduktionskaskade in Corynebacterium glutamicum
Schriften des Forschungszentrums Jülich : Gesundheit / Health 45, (0)


Customizable Visualization in the Context of Metabolic Networks
(2011)


Novel insights into the energy metabolism of Corynebacterium glutamicum by comprehensive analysis of mutants defective in respiration or oxidative phosphorylation
Schriften des Forschungszentrums Jülich : Gesundheit / Health 57, (0)


Signaltransduktion in Corynebacterium glutamicum: Studien zur Rolle der FHA-Proteine
Schriften des Forschungszentrums Jülich : Gesundheit / Health 49, (0)


Metabolic engineering of Corynebacterium glutamicum for efficient succinate production
Schriften des Forschungszentrums Jülich : Gesundheit / Health 47, (0)


Einfluss intrazellulärer Nukleotid-Cofaktoren auf Redoxreaktionen in rekombinanten Ganzzellsystemen
Schriften des Forschungszentrums Jülich : Gesundheit / Health 42, (2011)


Der Oxoglutarat-Dehydrogenase-Komplex in Corynebacterium glutamicum und seine Interaktion mit Odhl
(0)


CopRS and CsoR: two regulatory systems involved in copper homeostasis of Corynebacterium glutamicum
Schriften des Forschungszentrums Jülich : Gesundheit / Health 46, (0)


Transcriptional responses and transcriptional regulators of Gluconobacter oxydans 621H
Schriften des Forschungszentrums Jülich : Gesundheit / Health 51, (2011)


Untersuchung der L-Cystein-Biosynthese in Escherichia coli mit Techniken der Metabolom- und 13C-Stoffflussanalyse
(2011)


Enzyme supported crystallization of chiral amino acids
Schriften des Forschungszentrums Jülich : Gesundheit / Health 40, (2011)

Finished master, bachelor and diploma thesis in 2011

Bachelor Thesis

Evaluierung FRET-basierter Biosensoren als Werkzeuge für die quantitative Metabolitanalytik
(2011)

Diploma Thesis

Numerische Verfahren zur Lösung einer Familie hyperbolischer Differentialgleichungen zur Transportmodellierung in Pflanzen
(2011)

Master Thesis

Versuchsplanung und Datenauswertung für Hochdurchsatzexperimente mit Genetischen Algorithmen und Kriging-Verfahren
(2011)

Bachelor Thesis

Parameterschätzprobleme für Chromatogrphieverfahren
(2011)

Master Thesis

Explorative Datenanalyse mittels Klassifikationsverfahren – Vergleich traditioneller Methoden für Anwendungen in der Systembiologie
(2011)

Bachelor Thesis

Biochemische Charakterisierung einer NADPH-abhängigen Alkoholdehydrogenase aus Ralstonia sp.®
(2011)

Master Thesis

Analysis of the metabolomic stress response induced by heterologous protein expression in Corynebacterium glutamicum
(2011)

Bachelor Thesis

Implementierung eines interaktiven MATLAB-Werkzeugs zur Visualisierung Stöchiometrie-basierter Methoden der Netzwerk-Analyse
(2011)

Bachelor Thesis

Untersuchung und Verringerung des Leakage während des eiskalten Methanolquenchings
(2011)

Bachelor Thesis

Untersuchung der sequenziellen Verknüpfung der Enzyme der Glycolyse bei Escherichia coli
(2011)

Bachelor Thesis

Robuste Optimierung unscharfer linearer Probleme - Explorative Studie zur Bestimmung von Stoffflüssen in metabolischen Netzwerken
(2011)

Bachelor Thesis

Verbesserung der Expression und Reinigung der w-Transaminase CV2025 aus Chromobacterium violaceum
(2011)

Bachelor Thesis

Charakterisierung einer Variante der Hydroxynitril Lyase aus Arabidopsis thaliana
(2011)

Bachelor Thesis

Bioprozessentwicklung zur anaeroben Produktion von Succinat in C. glutamicum - Einfluss verschiedener O2-Limitationsprofile auf die Produktivität
(2011)

Master Thesis

Corynebacterium glutamicum: Analysis of growth and secretion at different oxygen transfer rates in automated microscale assay and scale-up to stirred tank reactor
(2011)

Diploma Thesis

Conception and realisation of a test setup to analyse the behaviour of E. coli in a microfluidic chip
(2011)

Master Thesis

Establishment of high throughput enzyme analytics on an automated liquid handling platform to characterize the central metabolism of Corynebacterium glutamicum
(2011)

Master Thesis

Informationsvisualisierung im Kontext biochemischer Netzwerke unter Verwendung von 3D Techniken
(2011)

Master Thesis

Scale up of optimized fed-batch process for heterologous protein secretion by Corynebacterium glutamicum
(2011)

Master Thesis

Development and Fabrication of Microfluidic Systems for Single Cell Analysis
(2011)

Proceedings 2011

Contribution to a conference proceedings/Contribution to a Book
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A Hybrid Parallelization Approach for Cloud-enabled Metabolic Flux Analysis Simulation Workflows
Gerevieweter Tagungsband, Proceedings des 4. Workshop Grid- und Cloud-Technologien für den Entwurf technischer Systeme - Grid4TS, Dresden, 2011. - ISSN 1862-622X. - S. 30 - 33 (2011)

Contribution to a conference proceedings/Contribution to a Book
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An online provenance service for distributed metabolic flux analysis workflows
2011 Ninth IEEE European Conference on Web Service, 2011. - 978-0-7695-4536-3/11. - S. 91 -98 (2011)

Book

Metabolische 13C-Stoffflussanalyse: vom isotopisch stationären zum instationären Fall
Schriften des Forschungszentrums Jülich. Reihe Gesundheit / health 39, Getr. Pag. (2011)

Contribution to a conference proceedings/Contribution to a Book
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Single Cell Trapping and Analysis of Prokaryotic Production Strains in sub µm Fluidic Structures
Proceedings of 15th International Conference on Miniaturized Systems for Chemistry and Life Sciences, October 2-6, 2011, Seattle, Washington, USA, ISBN 978-0-9798064-4-5 (2011)

Dissertation / PhD Thesis/Book

Einfluss intrazellulärer Nukleotid-Cofaktoren auf Redoxreaktionen in rekombinanten Ganzzellsystemen
Schriften des Forschungszentrums Jülich : Gesundheit / Health 42, (2011)

Dissertation / PhD Thesis/Book

Transcriptional responses and transcriptional regulators of Gluconobacter oxydans 621H
Schriften des Forschungszentrums Jülich : Gesundheit / Health 51, (2011)

Contribution to a conference proceedings/Contribution to a Book

Thesenpapier zum Status der Synthetischen Biologie in Deutschland
Thesenpapier, DECHEMA, Arbeitskreises Systembiologie und Synthetische Biologie Frankfurt, 2011. S. 1 - 23 (2011)

Dissertation / PhD Thesis/Book

Enzyme supported crystallization of chiral amino acids
Schriften des Forschungszentrums Jülich : Gesundheit / Health 40, (2011)


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