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NIC Series Volume 25:
High Performance Computing in Chemistry
edited by Johannes Grotendorst
ISBN 3-00-013618-5
December 2004, 160 pages
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Over the last three decades the methods of quantum chemistry
have shown an impressive development: a large number of
reliable and efficient approximations to the solution of
the non-relativistic Schrödinger and the relativistic Dirac
equation, respectively, are available.
This is complemented by the availability
of a number of well-developed computer programs which allow of
the treatment of chemical
problems as a matter of routine. This progress has been acknowledged
by the Nobel prize in chemistry 1998 to John Pople and Walter Kohn
for the development of quantum chemical methods.
Nowadays, Theoretical Chemistry is widely accepted as an
essential ingredient to research in a wide field of applications
ranging from chemistry over biochemistry/biophysics to different
flavors of material science: quantum chemical methods are indeed
one standard tool at universities and research centres as well
as in industrial research. The progress in experimental techniques
is invariably complemented by an increasing demand
for accurate quantum mechanical models
as a means to analyze and interpret experimental data
as well as to provide a
deeper understanding of the results.
On its own, the prediction of structures and properties
of materials and individual chemical compounds or complexes
is of great importance - either because the targets are experimentally
inaccessible at sufficient accuracy or experiments are too
expensive or impractical.
Currently quantum chemical methods are on the verge of being applied
to realistic problems. Many research topics of considerable
economical interest have quite demanding constraints:
they require to model large numbers of particles
(because the interesting properties require a certain minimum size
of the model to be of use), the requested level of accuracy is achievable
only within the realm of electronic structure methods or requires
the time-resolved dynamics of the process in question.
Additionally, it is observed that neighboring disciplines
such as chemistry, biochemistry, biophysics, solid state physics
and material science are gradually merging and in fact are
sharing similar challenges and closely related methodologies. In
view of today's complexity of software engineering and computer hardware
these disciplines depend heavily on the support of
computer science and applied mathematics.
Thus, in the field of computational science an increasing amount
of multidisciplinarity is not only beneficial but essential for solving
complex problems.
Finally, we have to anticipate the tremendous development in the
area of information technology both from the side of software as
well as hardware development. In particular the emerging parallel
computer and cluster systems open the road to tackle
challenges of unprecedented complexity.
However, method development must not only respond to the need of ever better
and computationally less expensive (linear scaling) models
but as well to the requirements of the underlying computer system
in terms of parallel scalability and efficient usage of the
(ever-changing) hardware.
Having in mind the wishes and requirements of the researchers in the
NIC community and in the German chemical industry the most promising methodologies
and quantum chemistry codes were chosen in order to push forward the development.
The selected program packages TURBOMOLE, Quickstep, and MOLPRO
cover complementary models and aspects of the whole range of quantum chemical methods.
Within the project High Performance Computing in Chemistry (HPC-Chem)
the functionality of these codes was extended, several important methods
with linear scaling behavior with respect to the molecular size
were developed and implemented,
and last but not least the parallel scalability on modern supercomputers and
cluster systems was substantially improved. In addition, for the treatment
of solute-solvent interactions in quantum mechanical calculations the
continuum model COSMO has been integrated into the aforementioned programs.
This is of great relevance for the range of use since most practical
problems are dealing with liquid phase chemistry.
I thank the HPC-Chem project partners and the industrial collaborators for their
cooperativeness and the authors from the different research groups for their
contributions to this book. Special thanks are due to Monika Marx,
who invested time and effort defining the layout, correcting the figures, and
designing the cover. The beauty of this volume is entirely her merit.
Jülich, October 2004
Johannes Grotendorst

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