Publications 2021
Journal Article
β-Turn exchanges in the α-synuclein segment 44-TKEG-47 reveal high sequence fidelity requirements of amyloid fibril elongation
Biophysical chemistry 269, 106519 - (2021) [10.1016/j.bpc.2020.106519]
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Substrate Access Mechanism in a Novel Membrane-Bound Phospholipase A of Pseudomonas aeruginosa Concordant with Specificity and Regioselectivity
Journal of chemical information and modeling 61(11), 5626–5643 (2021) [10.1021/acs.jcim.1c00973]
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Journal Article
Effects of a Multimerized Recombinant Autoantibody Against Amyloid-β
Neuroscience 463, 355 - 369 (2021) [10.1016/j.neuroscience.2021.03.006]
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Journal Article
Fusaristatins D–F and (7S,8R)-(−)-chlamydospordiol from Fusarium sp. BZCB-CA, an endophyte of Bothriospermum chinense
Tetrahedron 85, 132065 - (2021) [10.1016/j.tet.2021.132065]
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Journal Article
Structural determinants underlying the adduct lifetime in the LOV proteins of Pseudomonas putida
The FEBS journal 288(16), 4955-4972 (2021) [10.1111/febs.15785]
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Journal Article
Corrigendum: Therapeutic Potentials of Antiviral Plants Used in Traditional African Medicine With COVID-19 in Focus: A Nigerian Perspective
Frontiers in pharmacology 12, 721060 (2021) [10.3389/fphar.2021.721060]
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Journal Article
Therapeutic Potentials of Antiviral Plants Used in Traditional African Medicine With COVID-19 in Focus: A Nigerian Perspective
Frontiers in pharmacology 12, 596855 (2021) [10.3389/fphar.2021.596855]
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Journal Article
Targeting spectrin redox switches to regulate the mechanoproperties of red blood cells
Biological chemistry 402(3), 317–331 (2021) [10.1515/hsz-2020-0293]
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Journal Article
Compact fibril-like structure of amyloid β-peptide (1–42) monomers
Chemical communications 57(7), 947 - 950 (2021) [10.1039/D0CC06607A]
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Journal Article
F/G Region Rigidity is Inversely Correlated to Substrate Promiscuity of Human CYP Isoforms Involved in Metabolism
Journal of chemical information and modeling 61(8), 4023–4030 (2021) [10.1021/acs.jcim.1c00558]
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Journal Article
A comparative pan-genomic analysis of 53 C. pseudotuberculosis strains based on functional domains
Journal of biomolecular structure & dynamics 39(18), 6974 - 6986 (2021) [10.1080/07391102.2020.1805017]
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Journal Article
All - d - Enantiomeric Peptide D3 Designed for Alzheimer’s Disease Treatment Dynamically Interacts with Membrane-Bound Amyloid-β Precursors
Journal of medicinal chemistry 64(22), 16464 - 16479 (2021) [10.1021/acs.jmedchem.1c00632]
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Journal Article
Accessing Mitochondrial Protein Import in Living Cells by Protein Microinjection
Frontiers in cell and developmental biology 9, 698658 (2021) [10.3389/fcell.2021.698658]
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Journal Article
Liver cell hydration and integrin signaling
Biological chemistry 402(9), 1033-1045 (2021) [10.1515/hsz-2021-0193]
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Journal Article
Investigation of the synthesis and the alkali corrosion of potassium aluminosilicates by XRD and NMR (29Si, 27Al)
Ceramics international 47(23), 33596 - 33605 (2021) [10.1016/j.ceramint.2021.08.269]
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Journal Article
PEAβ Triggers Cognitive Decline and Amyloid Burden in a Novel Mouse Model of Alzheimer’s Disease
International journal of molecular sciences 22(13), 7062 - (2021) [10.3390/ijms22137062]
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Journal Article
Sex-Related Motor Deficits in the Tau-P301L Mouse Model
Biomedicines 9(9), 1160 - (2021) [10.3390/biomedicines9091160]
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Journal Article
Can Constraint Network Analysis guide the identification phase of KnowVolution? A case study on improved thermostability of an endo-β-glucanase
Computational and structural biotechnology journal 19, 743-751 (2021) [10.1016/j.csbj.2020.12.034]
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Journal Article
Conformational heterogeneity coupled with β-fibril formation of a scaffold protein involved in chronic mental illnesses
Translational Psychiatry 11(1), 639 (2021) [10.1038/s41398-021-01765-1]
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Journal Article
Discovery of new acetylcholinesterase inhibitors for Alzheimer’s disease: virtual screening and in vitro characterisation
Journal of enzyme inhibition and medicinal chemistry 36(1), 491 - 496 (2021) [10.1080/14756366.2021.1876685]
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Journal Article
Local Deuteration Enables NMR Observation of Methyl Groups in Proteins from Eukaryotic and Cell‐Free Expression Systems
Angewandte Chemie / International edition 60(25), 13783 - 13787 (2021) [10.1002/anie.202016070]
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Journal Article
The Repurposed Drugs Suramin and Quinacrine Cooperatively Inhibit SARS-CoV-2 3CLpro In Vitro
Viruses 13(5), 873 - (2021) [10.3390/v13050873]
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Journal Article
Promising Natural Compounds against Flavivirus Proteases: Citrus Flavonoids Hesperetin and Hesperidin
Plants 10(10), 2183 - (2021) [10.3390/plants10102183]
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Journal Article
In vitro study of Hesperetin and Hesperidin as inhibitors of zika and chikungunya virus proteases
PLOS ONE 16(3), e0246319 - (2021) [10.1371/journal.pone.0246319]
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Journal Article
Aqueous ionic liquids redistribute local enzyme stability via long-range perturbation pathways
Computational and structural biotechnology journal 19, 4248-4264 (2021) [10.1016/j.csbj.2021.07.001]
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Journal Article
Oral absorption enhancement of the amyloid-β oligomer eliminating compound RD2 by conjugation with folic acid
European journal of pharmaceutical sciences 156, 105581 - (2021) [10.1016/j.ejps.2020.105581]
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Journal Article
Histamine H3 receptor antagonists with peptidomimetic (keto)piperazine structures to inhibit Aβ oligomerisation
Bioorganic & medicinal chemistry 50, 116462 - (2021) [10.1016/j.bmc.2021.116462]
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Journal Article
Amyloid-β peptide dimers undergo a random coil to β-sheet transition in the aqueous phase but not at the neuronal membrane
Proceedings of the National Academy of Sciences of the United States of America 118(39), e2106210118 - (2021) [10.1073/pnas.2106210118]
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Journal Article
Chapter Five - Molecular simulations of IDPs: From ensemble generation to IDP interactions leading to disorder-to-order transitions
Progress in molecular biology and translational science 183, 135-185 (2021) [10.1016/bs.pmbts.2021.06.003]
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Journal Article
Interaction Mode of the Novel Monobactam AIC499 Targeting Penicillin Binding Protein 3 of Gram-Negative Bacteria
Biomolecules 11(7), 1057 - (2021) [10.3390/biom11071057]
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Journal Article
Glutamine synthetase as a central element in hepatic glutamine and ammonia metabolism: novel aspects
Biological chemistry 402(9), 1063-1072 (2021) [10.1515/hsz-2021-0166]
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Journal Article
Tryptophan (W) at position 37 of murine IL-12/IL-23 p40 is mandatory for binding to IL-12Rβ1 and subsequent signal transduction
The journal of biological chemistry 297(5), 101295 - (2021) [10.1016/j.jbc.2021.101295]
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Journal Article
The interaction of insoluble Amyloid‐β with soluble Amyloid‐β dimers decreases Amyloid‐β plaque numbers
Neuropathology & applied neurobiology 47(5), 603-610 (2021) [10.1111/nan.12685]
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Journal Article
The many facets of bile acids in the physiology and pathophysiology of the human liver
Biological chemistry 402(9), 1047-1062 (2021) [10.1515/hsz-2021-0156]
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Journal Article
Editorial: The Biochemistry of Amyloids in Neurodegenerative Diseases, Volume I.
Frontiers in neuroscience 15, 819481 (2021) [10.3389/fnins.2021.819481]
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Journal Article
Nitrate- and Nitrite-Sensing Histidine Kinases: Function, Structure, and Natural Diversity
International journal of molecular sciences 22(11), 5933 - (2021) [10.3390/ijms22115933]
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Journal Article
Structure and efflux mechanism of the yeast pleiotropic drug resistance transporter Pdr5
Nature Communications 12(1), 5254 (2021) [10.1038/s41467-021-25574-8]
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Journal Article
Protofibril‐Fibril Interactions Inhibit Amyloid Fibril Assembly by Obstructing Secondary Nucleation
Angewandte Chemie / International edition 60(6), 3016-3021 (2021) [10.1002/anie.202010098]
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Journal Article
A novel strategy for site selective spin-labeling to investigate bioactive entities by DNP and EPR spectroscopy
Scientific reports 11(1), 13714 (2021) [10.1038/s41598-021-92975-6]
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Journal Article
Rapid 18 F-labeling via Pd-catalyzed S -arylation in aqueous medium
Chemical communications 57, 3547-3550 (2021) [10.1039/D1CC00745A]
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Journal Article
Biochemical and Initial Structural Characterization of the Monocot Chimeric Jacalin OsJAC1
International journal of molecular sciences 22(11), 5639 - (2021) [10.3390/ijms22115639]
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Conference Presentation (After Call)
Interaction Study of a rice protein conferring pathogen defense - OsJAC1
EFB 2021, onlineonline, Germany, 10 May 2021 - 14 May 2021
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Journal Article
On the Role of Normal Aging Processes in the Onset and Pathogenesis of Diseases Associated with the Abnormal Accumulation of Protein Aggregates
Biochemistry (Moscow) 86(3), 275 - 289 (2021) [10.1134/S0006297921030056]
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Journal Article
Foamy Viruses, Bet, and APOBEC3 Restriction
Viruses 13(3), 504 (2021) [10.3390/v13030504]
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Journal Article
Reactive Metabolites from Thiazole-Containing Drugs: Quantum Chemical Insights into Biotransformation and Toxicity
Chemical research in toxicology 34(6), 1503–1517 (2021) [10.1021/acs.chemrestox.0c00450]
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Journal Article
The intramolecular allostery of GRB2 governing its interaction with SOS1 is modulated by phosphotyrosine ligands
Biochemical journal 478(14), 2793 - 2809 (2021) [10.1042/BCJ20210105]
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Journal Article
Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition) 1
Autophagy 17(1), 1 - 382 (2021) [10.1080/15548627.2020.1797280]
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Journal Article
Overexpression of Cystine/Glutamate Antiporter xCT Correlates with Nutrient Flexibility and ZEB1 Expression in Highly Clonogenic Glioblastoma Stem-like Cells (GSCs)
Cancers 13(23), 6001 - (2021) [10.3390/cancers13236001]
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Journal Article
Structural details of amyloid β oligomers in complex with human prion protein as revealed by solid-state MAS NMR spectroscopy
The journal of biological chemistry 296, 100499 - (2021) [10.1016/j.jbc.2021.100499]
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Journal Article
Small-Angle Neutron Scattering at the Pulsed Reactor IBR-2: Current Status and Prospects
Crystallography reports 66(2), 231 - 241 (2021) [10.1134/S1063774521020085]
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Journal Article
Cryo-EM model validation recommendations based on outcomes of the 2019 EMDataResource challenge
Nature methods 18(2), 156 - 164 (2021) [10.1038/s41592-020-01051-w]
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Journal Article
Discovery of Pyrrolidine-2,3-diones as Novel Inhibitors of P. aeruginosa PBP3
Antibiotics 10(5), 529 - (2021) [10.3390/antibiotics10050529]
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Journal Article
Dataset of AMBER force field parameters of drugs, natural products and steroids for simulations using GROMACS
Data in Brief 35, 106948 - (2021) [10.1016/j.dib.2021.106948]
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Journal Article
Novel inhibitors of the main protease enzyme of SARS-CoV-2 identified via molecular dynamics simulation-guided in vitro assay
Bioorganic chemistry 111, 104862 - (2021) [10.1016/j.bioorg.2021.104862]
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Journal Article
Modulation of Toll-like receptor 1 intracellular domain structure and activity by Zn2+ ions
Communications biology 4(1), 1003 (2021) [10.1038/s42003-021-02532-0]
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Journal Article
Erratum to: Novel pH-Sensitive Microbial Rhodopsin from Sphingomonas paucimobilis
Doklady biochemistry and biophysics 497(1), 158 - 158 (2021) [10.1134/S1607672921020198]
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Journal Article
NanoFAST: structure-based design of a small fluorogen-activating protein with only 98 amino acids
Chemical science 12(19), 6719 - 6725 (2021) [10.1039/D1SC01454D]
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Journal Article
Interdependence of a mechanosensitive anion channel and glutamate receptors in distal wound signaling
Science advances 7(37), eabg4298 (2021) [10.1126/sciadv.abg4298]
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Journal Article
TopSuite Web Server: A Meta-Suite for Deep-Learning-Based Protein Structure and Quality Prediction
Journal of chemical information and modeling 61(2), 548–553 (2021) [10.1021/acs.jcim.0c01202]
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Journal Article
TopDomain: Exhaustive Protein Domain Boundary Metaprediction Combining Multisource Information and Deep Learning
Journal of chemical theory and computation 17(7), 4599–4613 (2021) [10.1021/acs.jctc.1c00129]
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Journal Article
TopProperty: Robust Metaprediction of Transmembrane and Globular Protein Features Using Deep Neural Networks
Journal of chemical theory and computation 17(11), 7281 - 7289 (2021) [10.1021/acs.jctc.1c00685]
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Journal Article
Computational Analyses of the AtTPC1 (Arabidopsis Two-Pore Channel 1) Permeation Pathway
International journal of molecular sciences 22(19), 10345 - (2021) [10.3390/ijms221910345]
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Journal Article
Amyloid Oligomers: A Joint Experimental/Computational Perspective on Alzheimer’s Disease, Parkinson’s Disease, Type II Diabetes, and Amyotrophic Lateral Sclerosis
Chemical reviews 121(4), 2545 - 2647 (2021) [10.1021/acs.chemrev.0c01122]
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Journal Article
Promiscuous Esterases Counterintuitively Are Less Flexible than Specific Ones
Journal of chemical information and modeling 61(5), 2383 - 2395 (2021) [10.1021/acs.jcim.1c00152]
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Dissertation / PhD Thesis
Impact of enzyme rigidity and flexibility on stability against environmental influences, promiscuity, and expression on large-scale
251 p. (2021) = Dissertation, Heinrich-Heine-Universität Düsseldorf, 2021
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Journal Article
The Uppsala APP deletion causes early onset autosomal dominant Alzheimer’s disease by altering APP processing and increasing amyloid β fibril formation
Science translational medicine 13(606), eabc6184 (2021) [10.1126/scitranslmed.abc6184]
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Journal Article
Thermodynamics and kinetics of the amyloid-β peptide revealed by Markov state models based on MD data in agreement with experiment
Chemical science 12(19), 6652 - 6669 (2021) [10.1039/D0SC04657D]
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Journal Article
A promiscuous ancestral enzyme´s structure unveils protein variable regions of the highly diverse metallo-β-lactamase family
Communications biology 4(1), 132 (2021) [10.1038/s42003-021-01671-8]
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Journal Article
Allosteric signaling in C-linker and cyclic nucleotide-binding domain of HCN2 channels
Biophysical journal 120(5), 950-963 (2021) [10.1016/j.bpj.2021.01.017]
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Journal Article
A Novel Anti-Inflammatory d-Peptide Inhibits Disease Phenotype Progression in an ALS Mouse Model
Molecules 26(6), 1590 - (2021) [10.3390/molecules26061590]
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Journal Article
Oral Treatment with RD2RD2 Impedes Development of Motoric Phenotype and Delays Symptom Onset in SOD1G93A Transgenic Mice
International journal of molecular sciences 22(13), 7066 - (2021) [10.3390/ijms22137066]
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Journal Article
Clustering polymorphs of tau and IAPP fibrils with the CHEP algorithm
Progress in biophysics & molecular biology 160, 16 - 25 (2021) [10.1016/j.pbiomolbio.2020.11.007]
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Journal Article
Evidence for a credit-card-swipe mechanism in the human PC floppase ABCB4
Structure 29(10), 1144-1155.e5 (2021) [10.1016/j.str.2021.05.013]
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Journal Article
Insights into the mechanisms of light‐oxygen‐voltage domain color tuning from a set of high‐resolution X‐ray structures
Proteins 89(8), 1005 - 1016 (2021) [10.1002/prot.26078]
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Journal Article
High-Resolution Cryo-EM Structure of the Cardiac Actomyosin Complex
Structure 29(1), 50 - 60.e4 (2021) [10.1016/j.str.2020.09.013]
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Journal Article
Rhodopsin Channel Activity Can Be Evaluated by Measuring the Photocurrent Voltage Dependence in Planar Bilayer Lipid Membranes
Biochemistry (Moscow) 86(4), 409 - 419 (2021) [10.1134/S0006297921040039]
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Journal Article
The molecular basis of spectral tuning in blue- and red-shifted flavin-binding fluorescent proteins
The journal of biological chemistry 296, 100662 - (2021) [10.1016/j.jbc.2021.100662]
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Journal Article
Molecular model of a sensor of two-component signaling system
Scientific reports 11(1), 10774 (2021) [10.1038/s41598-021-89613-6]
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Journal Article
Ambiguities in and completeness of SAS data analysis of membrane proteins: the case of the sensory rhodopsin II–transducer complex
Acta crystallographica / Section D 77(11), 1386 - 1400 (2021) [10.1107/S2059798321009542]
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Journal Article
The Influences of Sulphation, Salt Type, and Salt Concentration on the Structural Heterogeneity of Glycosaminoglycans
International journal of molecular sciences 22(21), 11529 - (2021) [10.3390/ijms222111529]
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Journal Article
The Effects of Different Glycosaminoglycans on the Structure and Aggregation of the Amyloid-β (16–22) Peptide
The journal of physical chemistry <Washington, DC> / B 125(21), 5511 - 5525 (2021) [10.1021/acs.jpcb.1c00868]
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Journal Article
Ligand-Induced Stabilization of the Native Human Superoxide Dismutase 1
ACS chemical neuroscience 12(13), 2520–2528 (2021) [10.1021/acschemneuro.1c00253]
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Journal Article
Lack of GABARAP-Type Proteins Is Accompanied by Altered Golgi Morphology and Surfaceome Composition
International journal of molecular sciences 22(1), 85 - (2021) [10.3390/ijms22010085]
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Journal Article
In Vitro and In Vivo Efficacies of the Linear and the Cyclic Version of an All-d-Enantiomeric Peptide Developed for the Treatment of Alzheimer’s Disease
International journal of molecular sciences 22(12), 6553 - (2021) [10.3390/ijms22126553]
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Journal Article
Erratum: “AMBER-DYES in AMBER: Implementation of fluorophore and linker parameters into AmberTools” [J. Chem. Phys. 152, 221103 (2020)]
The journal of chemical physics 154(10), 109901 - (2021) [10.1063/5.0046589]
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Journal Article
Thermodynamic profile of mutual subunit control in a heteromeric receptor
Proceedings of the National Academy of Sciences of the United States of America 118(30), e2100469118 (2021) [10.1073/pnas.2100469118]
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Journal Article
40 Years of Research on Polybrominated Diphenyl Ethers (PBDEs)—A Historical Overview and Newest Data of a Promising Anticancer Drug
Molecules 26(4), 995 - (2021) [10.3390/molecules26040995]
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Journal Article
An essential role of the autophagy activating kinase ULK1 in snRNP biogenesis
Nucleic acids research 49(11), 6437 - 6455 (2021) [10.1093/nar/gkab452]
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Journal Article
Endo-lysosomal Aβ concentration and pH trigger formation of Aβ oligomers that potently induce Tau missorting
Nature Communications 12(1), 4634 (2021) [10.1038/s41467-021-24900-4]
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Journal Article
Versatile Route toward Hydrophobically Polymer-Grafted Gold Nanoparticles from Aqueous Dispersions
The journal of physical chemistry <Washington, DC> / B 125(29), 8225 - 8237 (2021) [10.1021/acs.jpcb.1c03772]
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Extreme dependence of Chloroflexus aggregans LOV domain thermo- and photostability on the bound flavin species
Photochemical & photobiological sciences 20(12), 1645 - 1656 (2021) [10.1007/s43630-021-00138-3]
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Self assembling cluster crystals from DNA based dendritic nanostructures
Nature Communications 12(1), 7167 (2021) [10.1038/s41467-021-27412-3]
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Amyloid aggregation simulations: challenges, advances and perspectives
Current opinion in structural biology 67, 145 - 152 (2021) [10.1016/j.sbi.2020.10.019]
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Energy Landscapes of Protein Aggregation and Conformation Switching in Intrinsically Disordered Proteins
Journal of molecular biology 433(20), 167182 - (2021) [10.1016/j.jmb.2021.167182]
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A new twist of rubredoxin function in M. tuberculosis
Bioorganic chemistry 109, 104721 - (2021) [10.1016/j.bioorg.2021.104721]
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A β-Wrapin Targeting the N-Terminus of α-Synuclein Monomers Reduces Fibril-Induced Aggregation in Neurons.
Frontiers in neuroscience 15, 696440 (2021) [10.3389/fnins.2021.696440]
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Recurring Gastrointestinal Infections Increase the Risk of Dementia
Journal of Alzheimer's disease 84(2), 797-806 (2021) [10.3233/JAD-210316]
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Molecular dynamics studies for enhancing the anticancer drug efficacy: Toward designing a new carbon nanotube-based paclitaxel delivery system
Journal of molecular liquids 323, 114638 - (2021) [10.1016/j.molliq.2020.114638]
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Ageing promotes pathological alpha-synuclein propagation and autonomic dysfunction in wild-type rats
Brain 144(6), 1853 - 1868 (2021) [10.1093/brain/awab061]
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Metabolic Fate of Human Immunoactive Sterols in Mycobacterium tuberculosis
Journal of molecular biology 433(4), 166763 - (2021) [10.1016/j.jmb.2020.166763]
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The Voltage Dependent Sidedness of the Reprotonation of the Retinal Schiff Base Determines the Unique Inward Pumping of Xenorhodopsin
Angewandte Chemie / International edition 60(42), 23010 - 23017 (2021) [10.1002/anie.202103882]
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Amyloid-type Protein Aggregation and Prion-like Properties of Amyloids
Chemical reviews 121(13), 8285 - 8307 (2021) [10.1021/acs.chemrev.1c00196]
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Comparison of the Amyloid Load in the Brains of Two Transgenic Alzheimer’s Disease Mouse Models Quantified by Florbetaben Positron Emission Tomography
Frontiers in neuroscience 15, 699926 (2021) [10.3389/fnins.2021.699926]
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Active antibacterial coating of cotton fabrics with antimicrobial proteins
Cellulose 28(12), 8077 - 8094 (2021) [10.1007/s10570-021-03997-2]
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Role of hydrogen bond alternation and charge transfer states in photoactivation of the Orange Carotenoid Protein
Communications biology 4(1), 539 (2021) [10.1038/s42003-021-02022-3]
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Rational Design of a Split Flavin-Based Fluorescent Reporter
ACS synthetic biology 10(1), 72 - 83 (2021) [10.1021/acssynbio.0c00454]
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Challenges in sample preparation and structure determination of amyloids by cryo-EM
The journal of biological chemistry 297(2), 100938 - (2021) [10.1016/j.jbc.2021.100938]
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