Supercomputing and Modeling for the Human Brain

All Publications

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Dataset - Online First Stacho, M. (Corresponding author)FZJ* ; Häusler, A. N. ; Brandstetter, A.FZJ* ; Iannilli, F. ; Schiffer, C.FZJ* ; Smaers, J. B. ; Mohlberg, H.FZJ* ; Bludau, S. (Corresponding author)FZJ* ; Amunts, K.FZJ*
Probabilistic cytoarchitectonic map of NRm (Midbrain, Nucleus Ruber, magnocellular part) (v2.0)
EBRAINS (2024) [10.25493/NBGN-6K0]2024 BibTeX | EndNote: XML, Text | RIS

Dataset - Online First Stacho, M. (Corresponding author)FZJ* ; Häusler, A. N. ; Brandstetter, A.FZJ* ; Iannilli, F. ; Schiffer, C.FZJ* ; Smaers, J. B. ; Mohlberg, H.FZJ* ; Bludau, S. (Corresponding author)FZJ* ; Amunts, K.FZJ*
Probabilistic cytoarchitectonic map of NRp (Midbrain, Nucleus Ruber, parvocellular part) (v2.0)
EBRAINS (2024) [10.25493/JYK2-17T]2024 BibTeX | EndNote: XML, Text | RIS

Dataset - Online First Stangier, J. ; Caspers, S.FZJ* ; Ruland, S. H. (Corresponding author)FZJ* ; Mohlberg, H.FZJ* ; Bludau, S. (Corresponding author)FZJ* ; Amunts, K. (Corresponding author)FZJ*
Probabilistic cytoarchitectonic map of Area 6v1 (PreCG) (v11.0)
EBRAINS (2024) [10.25493/FP6M-FRP]2024 BibTeX | EndNote: XML, Text | RIS

Dataset - Online First Ruland, S. H.FZJ* ; Sigl, B. ; Stangier, J. ; Caspers, S.FZJ* ; Mohlberg, H.FZJ* ; Bludau, S.FZJ* ; Amunts, K. (Corresponding author)FZJ*
Probabilistic cytoarchitectonic map of Area 6v2 (PreCG) (v11.0)
EBRAINS (2024) [10.25493/EK0H-B9W]2024 BibTeX | EndNote: XML, Text | RIS

Preprint - Online First Kuhles, G. (Corresponding author)FZJ* ; Hamdan, S.FZJ* ; Heim, S.FZJ* ; Eickhoff, S.FZJ* ; Patil, K.FZJ* ; Camilleri, J.FZJ* ; Weis, S.FZJ*
Pitfalls in using ML to predict cognitive function performance
Research Square (2024) [10.21203/rs.3.rs-4745684/v1]2024 Files BibTeX | EndNote: XML, Text | RIS

Conference Presentation (After Call) Ito, J. (Corresponding author)FZJ* ; Oberste-Frielinghaus, J.FZJ* ; Kurth, A.FZJ* ; Grün, S.FZJ*
Synfire chains in random weight threshold unit network
2024Bernstein Conference 2024, FrankfurtFrankfurt, Germany, 29 Sep 2024 - 2 Oct 20242024-09-292024-10-02 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (After Call) Ito, J. (Corresponding author)FZJ* ; Essink, S.FZJ* ; Riehle, A. ; Brochier, T. ; Grün, S.FZJ*
Sensory and behavioural tuning along the dorsal pathway
2024Seeing and Acting Workshop: Functional and Neural Perspectives, SAW2024, CoimbraCoimbra, Portugal, 26 Sep 2024 - 28 Sep 20242024-09-262024-09-28 BibTeX | EndNote: XML, Text | RIS

Journal Article Oberstraß, A. (Corresponding author)FZJ* ; Muenzing, S. ; Niu, M.FZJ* ; Palomero-Gallagher, N.FZJ* ; Schiffer, C.FZJ* ; Axer, M.FZJ* ; Amunts, K.FZJ* ; Dickscheid, T.FZJ*
Self-Supervised Representation Learning for Nerve Fiber Distribution Patterns in 3D-PLI
Imaging neuroscience 2, 1-29 (2024) [10.1162/imag_a_00351]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Köhler, C. A. (Corresponding author)FZJ*RWTH* ; Kern, M.FZJ* ; Grün, S.FZJ*RWTH* ; Denker, M.FZJ*
Tracking the provenance of data generation and analysis in NEST simulations
2024Bernstein Conference 2024, Frankfurt am MainFrankfurt am Main, Germany, 29 Sep 2024 - 2 Oct 20242024-09-292024-10-02 [10.12751/NNCN.BC2024.031] BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Oberste-Frielinghaus, J. (Corresponding author)FZJ* ; Kurth, A.FZJ* ; Göltz, J. ; Kriener, L. ; Ito, J.FZJ* ; Petrovici, M. ; Grün, S.FZJ*
Emergence of Synfire Chains in Functional Multi-Layer Spiking Neural Networks
2024Bernstein Conference 2024, Frankfurt a. M.Frankfurt a. M., Germany, 29 Sep 2024 - 2 Oct 20242024-09-292024-10-02 [10.12751/NNCN.BC2024.166] BibTeX | EndNote: XML, Text | RIS

Journal Article Pronold, J. ; van Meegen, A. ; Shimoura, R. O.FZJ* ; Vollenbröker, H. ; Senden, M. ; Hilgetag, C. C. ; Bakker, R.FZJ* ; van Albada, S. J. (Corresponding author)FZJ*
Multi-Scale Spiking Network Model of Human Cerebral Cortex
Cerebral cortex 34(10), bhae409 (2024) [10.1093/cercor/bhae409]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Senk, J. (Corresponding author)FZJ* ; Hagen, E.Extern* ; van Albada, S.FZJ* ; Diesmann, M.FZJ*
Reconciliation of weak pairwise spike-train correlations and highly coherent local field potentials across space
Cerebral cortex 34(10), 1-29 (2024) [10.1093/cercor/bhae405]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Schiffer, C. (Corresponding author)FZJ* ; Boztoprak, Z.FZJ* ; Amunts, K.FZJ* ; Dickscheid, T.FZJ*
CytoNet: A Deep Neural Network for Whole-brain Characterization of Human Cytoarchitecture
2024Helmholtz AI Conference 2024, HAICON24, DüsseldorfDüsseldorf, Germany, 12 Jun 2024 - 14 Jun 20242024-06-122024-06-14 [10.34734/FZJ-2024-05546] OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Kropp, J.-O. (Corresponding author)FZJ* ; Schiffer, C.FZJ* ; Amunts, K.FZJ* ; Dickscheid, T.FZJ*
Denoising Diffusion Probabilistic Models for Image Inpainting of Cell Distributions in the Human Brain
2024Helmholtz AI Conference 2024, HAICON24, düsseldorfdüsseldorf, Germany, 12 Jun 2024 - 14 Jun 20242024-06-122024-06-14 [10.34734/FZJ-2024-05544] OpenAccess Files Fulltext BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Kropp, J.-O. (Corresponding author)FZJ* ; Schiffer, C.FZJ* ; Amunts, K.FZJ* ; Dickscheid, T.FZJ*
Denoising Diffusion Probabilistic Models for Image Inpainting of Cell Distributions in the Human Brain
202421st IEEE International Symposium on Biomedical Imaging, ISBI 2024, AthensAthens, Greece, 27 May 2024 - 30 May 20242024-05-272024-05-30 [10.34734/FZJ-2024-05543] OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Boztoprak, Z. (Corresponding author)FZJ* ; Dickscheid, T.FZJ* ; Amunts, K.FZJ* ; Schiffer, C.FZJ*
Contrastive Learning of Cytoarchitecture using Spatial Information
2024Helmholtz Imaging Conference 2024, HeidelbergHeidelberg, Germany, 14 May 2024 - 15 May 20242024-05-142024-05-15 [10.34734/FZJ-2024-05541] OpenAccess Files Fulltext BibTeX | EndNote: XML, Text | RIS

Journal Article - Online First Gell, M.FZJ* ; Langner, R.FZJ* ; Küppers, V.FZJ* ; Cieslik, E. C.FZJ* ; Satterthwaite, T. D. ; Eickhoff, S. B.FZJ* ; Müller, V. I. (Corresponding author)FZJ*
Charting the brain networks of impulsivity: Meta-analytic synthesis, functional connectivity modelling and neurotransmitter associations
Imaging neuroscience ., . (2024) [10.1162/imag_a_00295]2024 Files BibTeX | EndNote: XML, Text | RIS

Contribution to a book Lübke, J. (Editor)FZJ* ; Rollenhagen, A. (Editor)FZJ* ; Korcsak-Gorzo, A. (Corresponding author)FZJ*RWTH* ; Linssen, C. (Corresponding author)FZJ* ; Albers, J.FZJ*RWTH* ; Dasbach, S.FZJ* ; Duarte, R.FZJ* ; Kunkel, S.FZJ* ; Morrison, A.FZJ*RWTH* ; Senk, J.FZJ* ; Stapmanns, J.FZJ*RWTH* ; Tetzlaff, T.FZJ* ; Diesmann, M.FZJ*RWTH* ; van Albada, S.FZJ*
Phenomenological Modeling of Diverse and Heterogeneous Synaptic Dynamics at Natural Density
2024New Aspects in Analyzing the Synaptic Organization of the Brain / Lübke, Joachim H.R. (Editor) ; New York, NY : Springer US, 2024, Chapter 15 ; ISSN: 0893-2336=1940-6045 ; ISBN: 978-1-0716-4018-0=978-1-0716-4019-7 ; doi:10.1007/978-1-0716-4019-7 New York, NY : Springer US, Neuromethods 212, 277 - 321 (2024) [10.1007/978-1-0716-4019-7_15]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Preprint Villamar, J. (Corresponding author)FZJ*RWTH* ; Kelbling, M. ; More, H.FZJ* ; Denker, M.FZJ* ; Tetzlaff, T.FZJ* ; Senk, J.FZJ* ; Thober, S.
Metadata practices for simulation workflows
arXiv (2024) [10.48550/arXiv.2408.17309]2024 OpenAccess Files Fulltext by arXiv.org BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Böttcher, J.FZJ* ; Linssen, C.FZJ* ; Ewert, L.FZJ* ; Blaszy, C. ; Morrison, A.FZJ* ; Wybo, W.FZJ*
Elucidating the spatial complexity of brain circuits with the NEST:multiscale toolchain
2024ICNCE-2024, RWTH AachenAachen, RWTH Aachen, Germany, 3 Jun 2024 - 6 Jun 20242024-06-032024-06-06 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Böttcher, J. (Corresponding author)FZJ* ; Linssen, C.FZJ* ; Ewert, L.FZJ* ; Blaszyck, C. ; Morrison, A.FZJ* ; Wybo, W.FZJ*
Preserving network responses under dendritic simplification with the NEST::multiscale toolchain
2024CNS *2024, RWTH AachenNatal, RWTH Aachen, Brazil, 20 Jul 2024 - 24 Jul 20242024-07-202024-07-24 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Albers, J. (Corresponding author)FZJ* ; Kurth, A.FZJ* ; Gutzen, R.FZJ* ; Morales-Gregorio, A.FZJ* ; Denker, M.FZJ* ; Grün, S.FZJ* ; van Albada, S.FZJ* ; Diesmann, M.FZJ*
Quantifying structural similarity between real matrices with arbitrary shape
2024CNS*2024, NatalNatal, Brazil, 20 Jul 2024 - 24 Jul 20242024-07-202024-07-24 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) Grün, S. (Corresponding author)FZJ*
Investigating neuronal interactions in the brain
2024Pucon Learning and AI Summit, PLENA, PuconPucon, Chile, 8 Apr 2024 - 12 Apr 20242024-04-082024-04-12 BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) Diesmann, M. (Corresponding author)FZJ*
Large-scale brain models and neuromorphic computing
2024Seminario “URGENCIAS Y CONTROVERSIAS EN INTELIGENCIA ARTIFICIAL“, ChileChile, 8 Apr 2024 - 8 Apr 20242024-04-082024-04-08 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Plenary/Keynote) Diesmann, M. (Corresponding author)FZJ*
Large-scale network models as digital twins advance theory and neuromorphic computing
2024Pucon Learning and AI Summit, PLENA, PuconPucon, Chile, 8 Apr 2024 - 12 Apr 20242024-04-082024-04-12 BibTeX | EndNote: XML, Text | RIS

Poster (Invited) Kraljevic, N. (Corresponding author)FZJ* ; Langner, R.FZJ* ; Raimondo, F.FZJ* ; Patil, K.FZJ* ; Kong, R. ; Ooi, L. Q. R. ; Thomas Yeo, B. T. ; Eickhoff, S.FZJ* ; Müller, V.FZJ*
Influence of Brain State, a priori Feature Selection, and Individualized Parcellation on Connectivity-Based Predictions of Behavior
2024Organization for Human Brain Mapping (OHBM) Annual Meeting 2024, SeoulSeoul, South Korea, 23 Jun 2024 - 27 Jun 20242024-06-232024-06-27 [10.34734/FZJ-2024-05133] OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Diaz-Pier, S. (Corresponding author)FZJ* ; Carloni, P.FZJ*
Impact of quantum and neuromorphic computing on biomolecular simulations: Current status and perspectives
Current opinion in structural biology 87, 102817 (2024) [10.1016/j.sbi.2024.102817]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) Oberste-Frielinghaus, J. (Corresponding author)FZJ*
Synfire Chains Emerge in Functional Multi-layer Spiking Neural Networks
2024Seminar, TokyoTokyo, Japan, 24 Jul 2024 - 26 Jul 20242024-07-242024-07-26 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Oberste-Frielinghaus, J. (Corresponding author)FZJ* ; Kurth, A.FZJ* ; Göltz, J. ; Kriener, L. ; Ito, J.FZJ* ; Petrovici, M. ; Grün, S.FZJ*
Propagation of Synfire Chains in Deep Spiking Networks
2024IRCN Course on Neuro-Inspired Computation, TokyoTokyo, Japan, 16 Jul 2024 - 19 Jul 20242024-07-162024-07-19 BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) van Albada, S. (Corresponding author)FZJ*
The microcircuit model as a building block for multi-area models
2024Building on Models: Experiences from a Decade with the Potjans-Diesmann Microcircuit Model, AachenAachen, Germany, 3 Apr 2024 - 4 Apr 20242024-04-032024-04-04 BibTeX | EndNote: XML, Text | RIS

Contribution to a book Amunts, K. (Corresponding author)FZJ* ; Zachlod, D.FZJ*
Human brain anatomy and atlases
2024Reference Module in Neuroscience and Biobehavioral Psychology / Amunts, Katrin ; : Elsevier, 2024, ; ISBN: 9780128093245 ; doi:10.1016/B978-0-12-820480-1.00187-X Amsterdam : Elsevier 1-21 (2024) [10.1016/B978-0-12-820480-1.00187-X]2024 Files BibTeX | EndNote: XML, Text | RIS

Poster (Invited) Zhang, S.FZJ* ; Jung, K.FZJ* ; Langner, R.FZJ* ; Florin, E. ; Eickhoff, S.FZJ* ; Popovych, O. (Corresponding author)FZJ*
Predicting individual differences from task-evoked effective connectivity
2024Organization for Human Brain Mapping (OHBM) Annual Meeting 2024, SeoulSeoul, South Korea, 23 Jun 2024 - 27 Jun 20242024-06-232024-06-27 [10.34734/FZJ-2024-04830] OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Albers, J. (Corresponding author)FZJ* ; Kurth, A.FZJ* ; Gutzen, R.FZJ* ; Morales-Gregorio, A.FZJ* ; Denker, M.FZJ* ; Grün, S.FZJ* ; van Albada, S.FZJ* ; Diesmann, M.FZJ*
Quantifying shared structure between real matrices of arbitrary shape
2024FENS Forum, WienWien, Austria, 25 Jun 2024 - 29 Jun 20242024-06-252024-06-29 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (After Call) Köhler, C. (Corresponding author)FZJ*RWTH* ; Kern, M.FZJ* ; Grün, S.FZJ*RWTH* ; Denker, M.FZJ*
An approach to handle provenance-tracked analysis of NEST simulations using Alpaca
2024NEST Conference 2024, virtualvirtual, virtual, 17 Jun 2024 - 18 Jun 20242024-06-172024-06-18 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Lober, M. (Corresponding author)FZJ* ; Diesmann, M.FZJ* ; Kunkel, S.FZJ*
Optimizing communication in brain-scale multi-area model simulations
2024International Conference on Neuromorphic Computing and Engineering, ICNCE2024, RWTH AachenAachen, RWTH Aachen, Germany, 3 Jun 2024 - 6 Jun 20242024-06-032024-06-06 [10.34734/FZJ-2024-03723] OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Oberste-Frielinghaus, J. (Corresponding author)FZJ* ; Kurth, A.FZJ* ; Goeltz, J. ; Kriener, L. ; Ito, J.FZJ* ; Petrovici, M. ; Grün, S.FZJ*
Propagation of Spike Packets in Deep Spiking Networks
2024ICNCE 24, RWTH AachenAachen, RWTH Aachen, Germany, 3 Jun 2024 - 6 Jun 20242024-06-032024-06-06 BibTeX | EndNote: XML, Text | RIS

Journal Article Tan, I.-A. (Corresponding author) ; Segal, N. ; Grodzinsky, Y.FZJ*
The Domains of Monotonicity Processing
Journal of semantics 41(1), 77-101 (2024) [10.1093/jos/ffae003]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Camilleri, J. A. (Corresponding author)FZJ* ; Volkening, J. ; Heim, S.FZJ* ; Mochalski, L. N.FZJ* ; Neufeld, H. ; Schlothauer, N.FZJ* ; Kuhles, G.FZJ* ; Eickhoff, S. B.FZJ* ; Weis, S.FZJ*
SpEx: a German-language dataset of speech and executive function performance
Scientific reports 14(1), 9431 (2024) [10.1038/s41598-024-58617-3]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Köhler, C. (Corresponding author)FZJ*RWTH* ; Ulianych, D.FZJ* ; Grün, S.FZJ*RWTH* ; Decker, S.RWTH* ; Denker, M.FZJ*
Facilitating the Sharing of Electrophysiology Data Analysis Results Through In-Depth Provenance Capture
eNeuro 11(6), ENEURO.0476-23.2024 - (2024) [10.1523/ENEURO.0476-23.2024]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Oberste-Frielinghaus, J. (Corresponding author)FZJ* ; Kurth, A.FZJ* ; Göltz, J. ; Kriener, L. ; Ito, J.FZJ* ; Petrovici, M. ; Grün, S.FZJ*
Propagation of Spike Packets in Deep Spiking Networks
2024Pucón Learning and AI Summit, PLENA 2024, RWTH AachenPucón, RWTH Aachen, Chile, 8 Apr 2024 - 12 Apr 20242024-04-082024-04-12 BibTeX | EndNote: XML, Text | RIS

Contribution to a conference proceedings/Contribution to a book auf der Heiden, F. (Corresponding author)FZJ* ; Münzer, O. ; van Staalduine, S. ; Amunts, K.FZJ* ; Axer, M.FZJ* ; Menzel, M.FZJ* ; Goda, K. (Editor) ; Tsia, K. K. (Editor)
Towards high-speed computational scattered light imaging by introducing compressed sensing for optimized illumination
2024High-Speed Biomedical Imaging and Spectroscopy IX : [Proceedings] - SPIE, 2024. - ISBN 97815106696599781510669666 - doi:10.1117/12.3000869
High-Speed Biomedical Imaging and Spectroscopy IX, San FranciscoSan Francisco, United States, 27 Jan 2024 - 1 Feb 20242024-01-272024-02-01 SPIE 1-12 (2024) [10.1117/12.3000869]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article van der Vlag, M. (Corresponding author)FZJ* ; Kusch, L. ; Destexhe, A. ; Jirsa, V. ; Diaz, S.FZJ* ; Goldman, J. S.
Vast Parameter Space Exploration of the Virtual Brain: A Modular Framework for Accelerating the Multi-Scale Simulation of Human Brain Dynamics
Applied Sciences 14(5), 2211 (2024) [10.3390/app14052211]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Stacho, M. (Corresponding author)FZJ* ; Häusler, A. N. ; Brandstetter, A.FZJ* ; Iannilli, F. ; Mohlberg, H.FZJ* ; Schiffer, C.FZJ* ; Smaers, J. B. ; Amunts, K.FZJ*
Phylogenetic reduction of the magnocellular red nucleus in primates and inter-subject variability in humans
Frontiers in neuroanatomy 18, 1331305 (2024) [10.3389/fnana.2024.1331305]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Preprint Oberstrass, A. (Corresponding author) ; Muenzing, S. E. A. ; Niu, M.FZJ* ; Palomero-Gallagher, N.FZJ* ; Schiffer, C.FZJ* ; Axer, M.FZJ* ; Amunts, K.FZJ* ; Dickscheid, T.FZJ*
Self-Supervised Representation Learning for Nerve Fiber Distribution Patterns in 3D-PLI
arXiv (2024) [10.48550/ARXIV.2401.17207]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Kuhles, G. (Corresponding author)FZJ* ; Camilleri, J.FZJ* ; Hamdan, S.FZJ* ; Heim, S.FZJ* ; Eickhoff, S.FZJ* ; Patil, K.FZJ* ; Weis, S.FZJ*
Pitfalls in using ML to predict executive function performance by linguistic variables
2024European Workshop on Cognitive Neuropsychology, EWCN, Heinrich-Heine Universität DüsseldorfBressanone/Brixen, Heinrich-Heine Universität Düsseldorf, Italy, 22 Jan 2024 - 26 Jan 20242024-01-222024-01-26 [10.34734/FZJ-2024-01168] OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Gutzen, R. (Corresponding author)FZJ* ; De Bonis, G. ; De Luca, C. ; Pastorelli, E. ; Capone, C. ; Allegra Mascaro, A. L. ; Resta, F. ; Manasanch, A. ; Pavone, F. S. ; Sanchez-Vives, M. V. ; Mattia, M. ; Grün, S.FZJ* ; Paolucci, P. S. ; Denker, M.FZJ*
A modular and adaptable analysis pipeline to compare slow cerebral rhythms across heterogeneous datasets
Cell reports / Methods 4(1), 100681 (2024) [10.1016/j.crmeth.2023.100681]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Jimenez-Romero, C.FZJ* ; Yegenoglu, A. (Corresponding author)FZJ* ; Pérez Martín, A.FZJ* ; Diaz, S.FZJ* ; Morrison, A.FZJ*
Emergent communication enhances foraging behavior in evolved swarms controlled by spiking neural networks
Swarm intelligence 18, 1-28 (2024) [10.1007/s11721-023-00231-6]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Jockwitz, C. (Corresponding author)FZJ* ; Krämer, C.FZJ* ; Dellani, P.FZJ* ; Caspers, S.FZJ*
Differential predictability of cognitive profiles from brain structure in older males and females
GeroScience 46, 1713–1730 (2024) [10.1007/s11357-023-00934-y]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) Diesmann, M. (Corresponding author)FZJ*
Brain models and simulation
2023visit of SAB, JülichJülich, Germany, 11 May 20232023-05-11 BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) Diesmann, M. (Corresponding author)FZJ*
Brain models and simulation
2023visit of Prof. Dr. Dr. h.c. Joachim Ullrich, JülichJülich, Germany, 4 May 20232023-05-04 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (After Call) Saberi, A. (Corresponding author)FZJ* ; Wischnewski, K.FZJ* ; Jung, K.FZJ* ; Schaare, L.FZJ* ; Popovych, O.FZJ* ; Eickhoff, S.FZJ* ; Valk, S.FZJ*
Whole-brain dynamical modeling of the adolescent developing brain
20237th BigBrain Workshop, ReykjavíkReykjavík, Iceland, 4 Oct 2023 - 6 Oct 20232023-10-042023-10-06 BibTeX | EndNote: XML, Text | RIS

Journal Article Meirhaeghe, N. (Corresponding author) ; Riehle, A.FZJ* ; Brochier, T.
Parallel movement planning is achieved via an optimal preparatory state in motor cortex
Cell reports 42(2), 112136 (2023) [10.1016/j.celrep.2023.112136]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Preprint Köhler, C. A. (Corresponding author)FZJ* ; Ulianych, D. ; Grün, S.FZJ* ; Decker, S. ; Denker, M.FZJ*
Facilitating the sharing of electrophysiology data analysis results through in-depth provenance capture
arXiv (2023) [10.48550/ARXIV.2311.09672]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Yamane, Y. ; Ito, J.FZJ* ; Joana, C. ; Fujita, I. ; Tamura, H. ; Maldonado, P. E. ; Doya, K. ; Grün, S.FZJ*
Neuronal Population Activity in Macaque Visual Cortices Dynamically Changes through Repeated Fixations in Active Free Viewing
eNeuro 10(10), ENEURO.0086-23.2023 - (2023) [10.1523/ENEURO.0086-23.2023]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Lober, M. (Corresponding author)FZJ* ; Diesmann, M.FZJ* ; Kunkel, S.FZJ*
Exploiting network topology in brain-scale multi-area model simulations
2023INM Retreat, RWTH AachenResearch Center Jülich, RWTH Aachen, Germany, 17 Oct 2023 - 18 Oct 20232023-10-172023-10-18 [10.34734/FZJ-2024-01379] OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Küppers, V. (Corresponding author)FZJ* ; Nicolaisen, E.FZJ* ; Hoffstaedter, F.FZJ* ; Drzezga, A.FZJ* ; Eickhoff, S.FZJ* ; Tahmasian, M.FZJ*
Multivariate associations of sleep quality, depressive symptoms, and grey matter volume with motor performance across the lifespan in large population cohorts
2023General Assembly of the Joint Lab Supercomputing and Modeling for the Human Brain (SMHB), JülichJülich, Germany, 4 Apr 2023 - 5 Apr 20232023-04-042023-04-05 [10.34734/FZJ-2023-05232] OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Oberste-Frielinghaus, J. (Corresponding author)FZJ* ; Morales-Gregorio, A.FZJ* ; Essink, S.FZJ* ; Kleinjohann, A.FZJ* ; Grün, S.FZJ* ; Ito, J.FZJ*
Mitigating the Impact of Artifacts in Massively Parallel Neural Recordings
2023Bernstein Conference 2023, RWTH AachenBerlin, RWTH Aachen, Germany, 26 Sep 2023 - 29 Sep 20232023-09-262023-09-29 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) Oberste-Frielinghaus, J. (Corresponding author)FZJ*
Population Unitary Event Analysis in Experimental Data and Network Simulations
2023Bernstein Conference 2023, RWTH AachenBerlin, RWTH Aachen, Germany, 26 Sep 2023 - 29 Sep 20232023-09-262023-09-29 BibTeX | EndNote: XML, Text | RIS

Preprint Senk, J. (Corresponding author)FZJ* ; Hagen, E. ; van Albada, S.FZJ* ; Diesmann, M.FZJ*
Reconciliation of weak pairwise spike-train correlations and highly coherent local field potentials across space
arXiv (2023) [10.48550/arXiv.1805.10235]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) van Albada, S. (Corresponding author)FZJ*
Estimating the primate cortical mesoconnectome to predict resting-state activity via large-scale simulations
2023Bernstein Conference Workshop, BerlinBerlin, Germany, 26 Sep 2023 - 29 Sep 20232023-09-262023-09-29 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Kleinjohann, A. (Corresponding author)FZJ* ; Sprenger, J. ; Barthélemy, F.FZJ* ; Grün, S.FZJ* ; Denker, M.FZJ*
Data and metadata acquisition workﬂows as a basis for collaborative science
2023Bernstein Conference 2023, BerlinBerlin, Germany, 26 Sep 2023 - 29 Sep 20232023-09-262023-09-29 [10.12751/NNCN.BC2023.195] Fulltext BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Krauße, S. (Corresponding author)FZJ* ; Gutzen, R.FZJ* ; Stella, A.FZJ* ; Brochier, T. ; Riehle, A.FZJ* ; Grün, S.FZJ* ; Denker, M.FZJ*
Relating the orientation of cortical traveling waves and co-occurring spike patterns
2023Bernstein Conference 2023, bernstein2023, BerlinBerlin, Germany, 26 Sep 2023 - 30 Sep 20232023-09-262023-09-30 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Ito, J. (Corresponding author)FZJ* ; Grün, S.FZJ*
A method for detecting spatio-temporal patterns of neuronal spikes based on principal component analysis
2023Bernstein Conference 2023, BerlinBerlin, Germany, 26 Sep 2023 - 29 Sep 20232023-09-262023-09-29 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Gutzen, R. (Corresponding author)FZJ* ; Brochier, T. ; Riehle, A.FZJ* ; Grün, S.FZJ* ; Denker, M.FZJ*
Cortical wave dynamics across visual areas of the macaque monkey during an instructed, free-viewing, visuomotor task
2023Bernstein Conference, BerlinBerlin, Germany, 27 Sep 2023 - 29 Sep 20232023-09-272023-09-29 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (After Call) Gutzen, R.FZJ*
Exploring the diversity of cortical wave activity with a unifying workflow approach
2023Concluding Event of the Human Brain Project, JülichJülich, Germany, 12 Sep 2023 - 13 Sep 20232023-09-122023-09-13 BibTeX | EndNote: XML, Text | RIS

Book/Dissertation / PhD Thesis Yegenoglu, A. (Corresponding author)FZJ*
Gradient-Free Optimization of Artificial and Biological Networks using Learning to Learn
Jülich : Forschungszentrum Jülich GmbH Zentralbibliothek, Verlag, Schriften des Forschungszentrums Jülich IAS Series 55, 149 pp. (2023) [10.34734/FZJ-2023-03569]2023 = Dissertation, RWTH Aachen University, 2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Conference Presentation (After Call) Gutzen, R.FZJ*
Exploring the diversity of cortical wave activity with a unifying workflow approach
2023Concluding Event of the Human Brain Project, JülichJülich, Germany, 12 Sep 2023 - 13 Sep 20232023-09-122023-09-13 BibTeX | EndNote: XML, Text | RIS

Journal Article Golosio, B. ; Villamar, J.FZJ* ; Tiddia, G. (Corresponding author) ; Pastorelli, E. ; Stapmanns, J. ; Fanti, V. ; Paolucci, P. S. ; Morrison, A.FZJ* ; Senk, J.FZJ*
Runtime Construction of Large-Scale Spiking Neuronal Network Models on GPU Devices
Applied Sciences 13(17), 9598, 29 pages (2023) [10.3390/app13179598]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Preprint Golosio, B. ; Villamar, J.FZJ* ; Tiddia, G. (Corresponding author) ; Pastorelli, E. ; Stapmanns, J. ; Fanti, V. ; Paolucci, P. S. ; Morrison, A.FZJ* ; Senk, J.FZJ*
Runtime Construction of Large-Scale Spiking Neuronal Network Models on GPU Devices
arXiv (2023) [10.34734/FZJ-2023-03232]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Conference Presentation (After Call) Villamar, J. (Corresponding author)FZJ* ; Golosio, B. ; Tiddia, G. ; Pastorelli, E. ; Stapmanns, J. ; Fanti, V. ; Diesmann, M.FZJ* ; Paolucci, P. S. ; Morrison, A.FZJ* ; Senk, J.FZJ*
Accelerating Neuronal Network Construction through Dynamic GPU Memory Instantiation
2023NEST Conference, VirtualVirtual, Germany, 15 Jun 2023 - 16 Jun 20232023-06-152023-06-16 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Nieto, N. (Corresponding author)FZJ* ; Raimondo, F.FZJ* ; Patil, K.FZJ*
JuHarmonize: Leakage-free data harmonization
2023Organization for Human Brain Mapping (OHBM), MontrealMontreal, Canada, 22 Jul 2023 - 26 Jul 20232023-07-222023-07-26 [10.34734/FZJ-2023-03220] OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Hamdan, S. (Corresponding author)FZJ* ; Love, B. C. ; Polier, G. v. ; Weis, S.FZJ* ; Schwender, H. ; Eickhoff, S.FZJ* ; Patil, K.FZJ*
Cofound-Leakage: Confound Removal In Machine Learning Leads To Leakage
2023Organization for Human Brain Mapping (OHBM), MontrealMontreal, Canada, 22 Jul 2023 - 26 Jul 20232023-07-222023-07-26 [10.34734/FZJ-2023-03045] OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Heckner, M. (Corresponding author)FZJ* ; Cieslik, E.FZJ* ; Paas Oliveros, L. K.FZJ* ; Eickhoff, S.FZJ* ; Patil, K.FZJ* ; Langner, R.FZJ*
Predicting Executive Functioning from Brain Networks: Modality Specificity and Age Effects
2023Organization for Human Brain Mapping (OHBM), MontrealMontreal, Canada, 22 Jul 2023 - 26 Jul 20232023-07-222023-07-26 [10.34734/FZJ-2023-03043] OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Lecture (After Call) Denker, M. (Corresponding author)FZJ* ; Kern, M.FZJ* ; Wachtler, T. ; Gupta, R.
Using open tools to build efficient workflows for data access, management and analysis
2023Lecture at CNS 2023 (Leipzig, Germany), 15 Jul 2023 - 15 Jul 20232023-07-152023-07-15 Fulltext BibTeX | EndNote: XML, Text | RIS

Journal Article Peitz, K. (Corresponding author)FZJ* ; Stumme, J.FZJ* ; Jockwitz, C.FZJ* ; Bittner, N.FZJ* ; Caspers, S.FZJ* ; Heim, S.FZJ*
The influence of bilingualism on gray matter volume in the course of aging: a longitudinal study
Frontiers in aging neuroscience 15, 1193283 (2023) [10.3389/fnagi.2023.1193283]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Poster (Other) Dickscheid, T. (Corresponding author)FZJ* ; Bludau, S.FZJ* ; Gui, X.FZJ* ; Amunts, K.FZJ*
The siibra toolsuite – making human brain organization accessible across scales and modalities
2023Organization for Human Brain Mapping, OHBM, MontréalMontréal, Canada, 22 Jul 2023 - 26 Jul 20232023-07-222023-07-26 [10.34734/FZJ-2023-02970] OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Oberste-Frielinghaus, J. (Corresponding author)FZJ* ; Morales-Gregorio, A.FZJ* ; Essink, S.FZJ* ; Kleinjohann, A.FZJ* ; Ito, J.FZJ* ; Grün, S.FZJ*
Detection and Mitigation of Artifacts in Massively Parallel Recordings
2023CNS*2023, RWTH AachenLeipzig, RWTH Aachen, Germany, 15 Jul 2023 - 19 Jul 20232023-07-152023-07-19 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (After Call) Ito, J. (Corresponding author)FZJ* ; Gutzen, R.FZJ* ; Krauße, S.FZJ* ; Denker, M.FZJ* ; Grün, S.FZJ*
Towards classification of spatio-temporal wave patterns based on principal component analysis
202332nd Annual Computational Neuroscience Meeting, CNS2023, LeipzigLeipzig, Germany, 15 Jul 2023 - 19 Jul 20232023-07-152023-07-19 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Kleinjohann, A. (Corresponding author)FZJ* ; Berling, D. ; Stella, A.FZJ* ; Palm, G.FZJ* ; Tetzlaff, T.FZJ* ; Grün, S.FZJ*
Anatomical Network Model with Embedded Synfire Chains is Consistent with Cortical Spatio-Temporal Spike Patterns
202332nd Annual Computational Neuroscience Meeting, CNS 2023, LeipzigLeipzig, Germany, 15 Jul 2023 - 26 Jul 20232023-07-152023-07-26 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) Senk, J. (Corresponding author)FZJ* ; Hagen, E. ; van Albada, S.FZJ* ; Diesmann, M.FZJ*
A mesoscopic layered cortical network model for spiking activity and local field potentials
202332nd Annual Computational Neuroscience Meeting, CNS*2023, LeipzigLeipzig, Germany, 15 Jul 2023 - 19 Jul 20232023-07-152023-07-19 BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) van Albada, S. (Corresponding author)FZJ*
Primate brains in silico: Large-scale neural network simulations of macaque and human cortices
2023Donders Centre for Neuroscience seminar, Radboud UniversityNijmegen, Radboud University, Netherlands, 13 Jul 20232023-07-13 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Yegenoglu, A. (Corresponding author)FZJ* ; Jimenez-Romero, C.FZJ* ; Perez Martin, A.FZJ* ; van der Vlag, M.FZJ* ; Klijn, W.FZJ* ; Hater, T.FZJ* ; Morrison, A.FZJ* ; Diaz, S.FZJ*
Gradient free optimization of neuroscience models at different scales with L2L
2023HBP Summit 2023, MarseilleMarseille, France, 27 Mar 2023 - 31 Mar 20232023-03-272023-03-31 [10.34734/FZJ-2023-02678] OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Other) Yegenoglu, A. (Corresponding author)FZJ* ; van der Vlag, M. (Corresponding author)FZJ*
Introduction to High Performance Computing
2023Life Science PhD Meeting, Medizinische Universität InnsbruckInnsbruck, Medizinische Universität Innsbruck, Austria, 12 Apr 2023 - 14 Apr 20232023-04-122023-04-14 Fulltext BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Other) Yegenoglu, A. (Corresponding author)FZJ* ; van der Vlag, M. (Corresponding author)FZJ* ; Diaz, S.FZJ*
Vast parameter space exploration using Learning to Learn on EBRAINS
2023HBP Summit 2023, MarseilleMarseille, France, 27 Mar 2023 - 31 Mar 20232023-03-272023-03-31 BibTeX | EndNote: XML, Text | RIS

Journal Article Menzel, M. (Corresponding author)FZJ* ; Gräßel, D.FZJ* ; Rajkovic, I. ; Zeineh, M. M. ; Georgiadis, M.
Using light and X-ray scattering to untangle complex neuronal orientations and validate diffusion MRI
eLife 12, e84024 (2023) [10.7554/eLife.84024]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Conference Presentation (After Call) Gutzen, R. (Corresponding author)FZJ*
Adaptable workflows for neural activity analysis in an open-source environment
2023International Forum on Neural Engineering & Brain Technologies, NBT, BerlinBerlin, Germany, 20 Jun 2023 - 21 Jun 20232023-06-202023-06-21 BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) Gutzen, R. (Corresponding author)FZJ* ; Bonis, G. D. ; Paolucci, P. S. ; Denker, M.FZJ*
Collaborative Brain Wave Analysis Pipeline
2023HBP Fundraising Bootcamp, BrusselsBrussels, Belgium, 30 May 2023 - 31 May 20232023-05-302023-05-31 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) Senk, J. (Corresponding author)FZJ*
Tutorial: Modelling networks with NEST & Tutorial: Modelling cortical regions
2023EBRAINS Brain Simulation School 2023: Training on modelling neurons, circuits, and cognitive functions, Genoa, Marseille, Palma de Mallorca, Barcelona, Italy, France, Spain, 19 May 2023 - 24 May 20232023-05-192023-05-24 Fulltext BibTeX | EndNote: XML, Text | RIS

Conference / Event Korcsak-Gorzo, A. (Corresponding author)FZJ* ; Linssen, C.FZJ* ; Strohmer, B.
Plastic balanced random networks in NEST
2023Workgroup at Capo Caccia Neuromorphic Workshop, AlgheroAlghero, Italy, 30 Apr 2023 - 14 May 20232023-04-302023-05-14 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) van Albada, S. (Corresponding author)FZJ*
Large-scale spiking neural network simulations of human and non-human primate cortices
2023In2PrimateBrains Thematic Workshop 2, HeraklionHeraklion, Greece, 8 May 2023 - 12 May 20232023-05-082023-05-12 BibTeX | EndNote: XML, Text | RIS

Poster (Other) Korcsak-Gorzo, A. (Corresponding author)FZJ* ; Stapmanns, J.FZJ* ; Espinoza Valverde, J. A. ; Dahmen, D.FZJ* ; van Albada, S.FZJ* ; Bolten, M. ; Diesmann, M.FZJ*
Event-driven eligibility propagation in large-scale spiking neural networks
2023SMHB General Assembly, JülichJülich, Germany, 4 Apr 2023 - 5 Apr 20232023-04-042023-04-05 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Lahnakoski, J. (Corresponding author)FZJ* ; Dukart, J.FZJ* ; Schilbach, L.
Interaction-based phenotyping as observer-independent measures of social impairments across psychiatric disorders
2023General Assembly of the Joint Lab Supercomputing and Modeling for the Human Brain (SMHB), JülichJülich, Germany, 4 Apr 2023 - 5 Apr 20232023-04-042023-04-05 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Lecture (Invited) Denker, M. (Corresponding author)FZJ* ; Kern, M.FZJ*
Processing electrophysiological activity data using Neo, Elephant and Alpaca
2023Lecture at SMHB General Assembly (Germany), BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Kasper, J.FZJ* ; Caspers, S.FZJ* ; Lotter, L.FZJ* ; Hoffstaedter, F.FZJ* ; Eickhoff, S.FZJ* ; Dukart, J.FZJ*
Brain function - neurotransmitter co localization: Effects of aging and deviations in Parkinson’s disease
2023General Assembly of the Joint Lab Supercomputing and Modeling for the Human Brain (SMHB), JülichJülich, Germany, 4 Apr 2023 - 5 Apr 20232023-04-042023-04-05 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Omidvarnia, A. (Corresponding author)FZJ* ; Sasse, L.FZJ* ; Larabi, D.FZJ* ; Raimondo, F.FZJ* ; Hoffstaedter, F.FZJ* ; Kasper, J.FZJ* ; Dukart, J.FZJ* ; Petersen, M. ; Cheng, B. ; Thomalla, G. ; Eickhoff, S.FZJ* ; Patil, K.FZJ*
Is resting state fMRI better than individual characteristics at predicting cognition?
2023General Assembly of the Joint Lab Supercomputing and Modeling for the Human Brain (SMHB), JülichJülich, Germany, 4 Apr 2023 - 5 Apr 20232023-04-042023-04-05 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Maleki Balajoo, S. (Corresponding author)FZJ* ; Eickhoff, S. B.FZJ* ; Masouleh, S. K. ; Plachti, A. ; Waite, L.FZJ* ; Saberi, A.FZJ* ; Bahri, M. A. ; Bastin, C. ; Salmon, E. ; Hoffstaedter, F.FZJ* ; Palomero-Gallagher, N.FZJ* ; Genon, S.FZJ*
Hippocampal metabolic subregions and networks: Behavioral, molecular, and pathological aging profiles
Alzheimer's and dementia 19(11), 4787-4804 (2023) [10.1002/alz.13056]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) Denker, M. (Corresponding author)FZJ*
Improving rigor and knowledge transfer for analysis workflows in electrophysiology
2023SMHB General Assembly, JülichJülich, Germany, 5 Apr 2023 - 5 Apr 20232023-04-052023-04-05 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) van Albada, S. (Corresponding author)FZJ*
Large-scale spiking simulations of cortical resting-state activity
2023SMHB General Assembly, JülichJülich, Germany, 4 Apr 2023 - 5 Apr 20232023-04-042023-04-05 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Wiersch, L.FZJ* ; Eickhoff, S.FZJ* ; Patil, K.FZJ* ; Weis, S.FZJ*
Generalizability in sex classification models
2023General Assembly of the Joint Lab Supercomputing and Modeling for the Human Brain (SMHB), JülichJülich, Germany, 4 Apr 2023 - 5 Apr 20232023-04-042023-04-05 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Komeyer, V.FZJ* ; Eickhoff, S.FZJ* ; Grefkes, C. ; Raimondo, F.FZJ* ; Patil, K.FZJ*
The Confound Continuum: A 2D confounder assessment for AI in precision medicine
2023General Assembly of the Joint Lab Supercomputing and Modeling for the Human Brain (SMHB), JülichJülich, Germany, 4 Apr 2023 - 5 Apr 20232023-04-042023-04-05 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Preprint Pronold, J. (Corresponding author)FZJ* ; van Meegen, A. (Corresponding author)FZJ* ; Vollenbröker, H. ; Shimoura, R.FZJ* ; Senden, M. ; Hilgetag, C. C. ; Bakker, R.FZJ* ; van Albada, S. (Corresponding author)FZJ*
Multi-scale spiking network model of human cerebral cortex
bioRxiv beta (2023) [10.1101/2023.03.23.533968v1]2023 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) van Albada, S. (Corresponding author)FZJ*
From structure to activity and back in spiking cortical models
2023Networks of spiking neurons, ParisParis, France, 27 Mar 2023 - 31 Mar 20232023-03-272023-03-31 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Other) Dickscheid, T.FZJ* ; van Albada, S.FZJ*
Cellular, connectional and molecular heterogeneity in a large-scale computational model of the human cerebral cortex
2023SPP 2041 Annual Status Meeting, FrankfurtFrankfurt, Germany, 1 Mar 2023 - 2 Mar 20232023-03-012023-03-02 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Yegenoglu, A. (Corresponding author)FZJ* ; Jimenez-Romero, C.FZJ* ; Perez Martin, A.FZJ* ; van der Vlag, M.FZJ* ; Klijn, W.FZJ* ; Hater, T.FZJ* ; Morrison, A.FZJ* ; Diaz, S.FZJ*
Gradient free optimization of neuroscience models at different scales with L2L
2023CASA Kick off, JuelichJuelich, Germany, 26 Jan 2023 - 26 Jan 20232023-01-262023-01-26 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) van Albada, S. (Corresponding author)FZJ*
Simulating monkey and human cortices at cellular resolution
2023M-BIC Lecture, Maastricht UniversityMaastricht, Maastricht University, Netherlands, 6 Feb 2023 - 6 Feb 20232023-02-062023-02-06 BibTeX | EndNote: XML, Text | RIS

Journal Article Zajzon, B. (Corresponding author)FZJ* ; Dahmen, D.FZJ* ; Morrison, A.FZJ* ; Duarte, R.
Signal denoising through topographic modularity of neural circuits
eLife 12, e77009 (2023) [10.7554/eLife.77009]2023 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) van Albada, S. (Corresponding author)FZJ*
Unifying the spiking and large-scale dynamics of cortex through simulation
2023Atelier Neurosciences Computationnelles Aviesan, ParisParis, France, 13 Jan 2023 - 13 Jan 20232023-01-132023-01-13 BibTeX | EndNote: XML, Text | RIS

Journal Article Gutzen, R. (Corresponding author)FZJ* ; Grün, S.FZJ* ; Denker, M.FZJ*
Evaluating the statistical similarity of neural network activity and connectivity via eigenvector angles
Biosystems 223, 104813 (2023) [10.1016/j.biosystems.2022.104813] special issue: "Selected Papers from the 14th International Neural Coding Workshop, Seattle, Washington" (0303-2647)2023 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Krämer, C.FZJ* ; Stumme, J.FZJ* ; da Costa Campos, L. ; Rubbert, C. ; Caspers, J. ; Caspers, S.FZJ* ; Jockwitz, C. (Corresponding author)FZJ*
Classification and prediction of cognitive performance differences in older age based on brain network patterns using a machine learning approach
Network neuroscience 7(1), 122–147 (2023) [10.1162/netn_a_00275]2023 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Zachlod, D. (Corresponding author)FZJ* ; Palomero-Gallagher, N.FZJ* ; Dickscheid, T.FZJ* ; Amunts, K.FZJ*
Mapping cyto- and receptor architectonics to understand brain function and connectivity
Biological psychiatry 93(5), 471-479 (2023) [10.1016/j.biopsych.2022.09.014]2023 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (Other) Korcsak-Gorzo, A. (Corresponding author)FZJ* ; Stapmanns, J.FZJ* ; Espinoza Valverde, J. A. ; Dahmen, D.FZJ* ; van Albada, S.FZJ* ; Bolten, M. ; Diesmann, M.FZJ*
Eligibility propagation in large-scale neural networks
2022NIC Symposium, JülichJülich, Germany, 29 Sep 2022 - 30 Sep 20222022-09-292022-09-30 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) Senk, J. (Corresponding author)FZJ*
On concepts, correctness, and performance of network simulations
2022INCF Neuroinformatics Assembly 2022, virtualvirtual, virtual, 13 Sep 2022 - 13 Sep 20222022-09-132022-09-13 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Villamar, J. (Corresponding author)FZJ* ; Kelbling, M. ; Terhorst, D.FZJ* ; More, H.FZJ* ; Tetzlaff, T.FZJ* ; Senk, J.FZJ* ; Thober, S.
Tracking large-scale simulations through unified metadata handling
2022Helmholtz Metadata Collaboration Conference 2022, virtualvirtual, virtual, 5 Oct 2022 - 6 Oct 20222022-10-052022-10-06 BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) Diaz, S. (Corresponding author)FZJ*
User community requirements for driving innovation across Europe: JSC and SDL Neuroscience
2022HealthyCloud technical users workshop, Amsterdam, NetherlandsAmsterdam, Netherlands, Netherlands, 8 Dec 2022 - 9 Dec 20222022-12-082022-12-09 BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) Yegenoglu, A. (Corresponding author)FZJ* ; Bachmann, C.FZJ* ; Diaz, S.FZJ* ; Todt, D.FZJ*
Artificial and biological learning
2022JULAB Entdeckerwoche 2022, JülichJülich, Germany, 26 Jul 20222022-07-26 BibTeX | EndNote: XML, Text | RIS

Lecture (Other) Diaz, S. (Corresponding author)FZJ* ; Klijn, W.FZJ* ; Deepu, R.FZJ* ; Perez Martin, A.FZJ* ; Yegenoglu, A.FZJ*
Porting code from Matlab to Python
2022Lecture at Jülich Supercomputing Centre - as part of the Training Programme of Forschungszentrum Jülich (Online, Online), 6 Oct 2022 - 7 Oct 20222022-10-062022-10-07 BibTeX | EndNote: XML, Text | RIS

Lecture (Other) Diaz, S. (Corresponding author)FZJ* ; Hater, T.FZJ* ; Huisman, B.FZJ* ; Rotter, S. ; Lu, H. ; Cuntz, H. ; Schmitt, S.
Simulating plasticity in morphologically detailed neural networks with Arbor
2022Lecture at Bernstein Conference Satellite Workshops 2022 (Berlin, Germany, Germany), 13 Sep 2022 - 14 Sep 20222022-09-132022-09-14 BibTeX | EndNote: XML, Text | RIS

Lecture (Outreach) Diaz, S. (Corresponding author)FZJ* ; Bachmann, C.FZJ* ; Yegenoglu, A.FZJ* ; Klijn, W.FZJ* ; Geminiani, A. ; Özden, T.
Young Researchers using EBRAINS for tomorrow's scientific challenges
2022Lecture at HBP outreach event series (Online, Online), 18 Jul 2022 - 19 Jul 20222022-07-182022-07-19 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Panel discussion) Diaz, S. (Corresponding author)FZJ* ; van Albada, S.FZJ* ; Kunkel, S.FZJ* ; Bachmann, C.FZJ* ; Lu, H.
Women at the interface between neuroscience and high performance computing
2022Women in Neuroscience Symposium 2022, TbilisiTbilisi, Rep of Georgia, 12 Aug 2022 - 14 Aug 20222022-08-122022-08-14 BibTeX | EndNote: XML, Text | RIS

Lecture (Invited) Diaz, S. (Corresponding author)FZJ* ; Sánchez, Ó. D. R. ; Fernández, S. M.
Now you see it! Visualization and modeling tools for neuroscience on EBRAINS
2022Lecture at Workshop at the 6th HBP Student Conference (Innsbruck, online, Austria), 22 Feb 2022 - 25 Feb 20222022-02-222022-02-25 BibTeX | EndNote: XML, Text | RIS

Lecture (Invited) Diaz, S. (Corresponding author)FZJ* ; Yegenoglu, A.FZJ* ; Bachmann, C.FZJ*
Simulation of Biological Neuronal Networks
2022Lecture at University of Freiburg (Germany), 1 Aug 2022 - 5 Aug 20222022-08-012022-08-05 BibTeX | EndNote: XML, Text | RIS

Preprint Korcsak-Gorzo, A. (Corresponding author)FZJ* ; Linssen, C.FZJ* ; Albers, J.FZJ* ; Dasbach, S. (Corresponding author)FZJ* ; Duarte, R. ; Kunkel, S. ; Morrison, A.FZJ* ; Senk, J.FZJ* ; Stapmanns, J.FZJ* ; Tetzlaff, T.FZJ* ; Diesmann, M.FZJ* ; van Albada, S. J.FZJ*
Phenomenological modeling of diverse and heterogeneous synaptic dynamics at natural density
arXiv (2022) [10.48550/ARXIV.2212.05354]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Lecture (Invited) Korcsak-Gorzo, A.FZJ* ; Albers, J. (Corresponding author)FZJ*
Simulating spatially organized networks and plasticity with NEST
2022Lecture at 9th Baltic-Nordic Summer School on Neuroinformatics at Jagiellonian University (Krakow, Poland), 5 Jul 2022 - 5 Jul 20222022-07-052022-07-05 BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Other) Klijn, W. (Corresponding author)FZJ* ; Jimenez-Romero, C.FZJ* ; Sontheimer, K.FZJ* ; Fahad, M.FZJ* ; Ingles Chavez, R.FZJ* ; Oden, L.FZJ* ; Morrison, A.FZJ*
Co-simulation in the Modular Science Framework, controlling complexity
2022Simulate with EBRAINS workshop, JülichJülich, Germany, 7 Nov 2022 - 10 Nov 20222022-11-072022-11-10 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) Klijn, W. (Corresponding author)FZJ*
Challenges and opportunities for large-scale federated science and computing in the EU landscape
2022Braincomp2022 Computational Challenges of Connectivity, CetraroCetraro, Italy, 19 Sep 2022 - 22 Sep 20222022-09-192022-09-22 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) Klijn, W. (Corresponding author)FZJ*
High level view EBRAINS and HBP
2022Young Researchers using EBRAINS for tomorrow's scientific challenges, GermanyGermany, 18 Jul 20222022-07-18 BibTeX | EndNote: XML, Text | RIS

Lecture (Other) Klijn, W. (Corresponding author)FZJ*
The Web-based NEST Ecosystem on EBRAINS
2022Lecture at Austrian Neuroscience Association: EBRAINS TRAINING ON BRAIN ATLASES AND SIMULATION SERVICES (Austria), 16 Sep 2022 - 16 Sep 20222022-09-162022-09-16 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) Klijn, W. (Corresponding author)FZJ*
The Atlas and Simulation Services on EBRAINS
2022Austrian Neuroscience Association EBRAINS TRAINING ON BRAIN ATLASES AND SIMULATION SERVICES, AustriaAustria, 16 Sep 20222022-09-16 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Lecture (Invited) Kern, M. (Corresponding author)FZJ* ; Denker, M.FZJ*
Elephant: a data analysis frmework for electrophysiological activity data
2022Lecture at Simulate with EBRAINS (Virtual), 10 Nov 2022 - 10 Nov 20222022-11-102022-11-10 BibTeX | EndNote: XML, Text | RIS

Journal Article Ito, J. (Corresponding author)FZJ* ; Joana, C. ; Yamane, Y. ; Fujita, I. ; Tamura, H. ; Mardonado, P. E. ; Grün, S.FZJ*
Latency shortening with enhanced sparseness and responsiveness in V1 during active visual sensing
Scientific reports 12(1), 6021 (2022) [10.1038/s41598-022-09405-4]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Yegenoglu, A. (Corresponding author)FZJ* ; Subramoney, A. ; Hater, T.FZJ* ; Jimenez-Romero, C.FZJ* ; Klijn, W.FZJ* ; Pérez Martín, A.FZJ* ; van der Vlag, M.FZJ* ; Herty, M. ; Morrison, A.FZJ* ; Diaz, S.FZJ*
Exploring Parameter and Hyper-Parameter Spaces of Neuroscience Models on High Performance Computers With Learning to Learn
Frontiers in computational neuroscience 16, 885207 (2022) [10.3389/fncom.2022.885207]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Lecture (Invited) van Albada, S. (Corresponding author)FZJ*
Large-scale spiking network models
2022Lecture at EITN Fall School (Paris, France), 24 Sep 2022 - 24 Sep 20222022-09-242022-09-24 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) van Albada, S. (Corresponding author)FZJ* ; Rowley, A.
Implementing the modular and long-tailed structure of cortex in large spiking models
2022Neuromorphic Algorithms 2022, NEAL2022, VolpriehausenVolpriehausen, Germany, 6 Sep 2022 - 8 Sep 20222022-09-062022-09-08 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) van Albada, S. (Corresponding author)FZJ*
A career between continents
2022Women in Neuroscience Symposium 2022, Tbilisi/onlineTbilisi/online, Rep of Georgia, 12 Aug 2022 - 14 Aug 20222022-08-122022-08-14 BibTeX | EndNote: XML, Text | RIS

Journal Article Tiddia, G. ; Golosio, B. (Corresponding author) ; Albers, J.FZJ* ; Senk, J.FZJ* ; Simula, F. ; Pronold, J.FZJ* ; Fanti, V. ; Pastorelli, E. ; Paolucci, P. S. ; van Albada, S. J.FZJ*
Fast Simulation of a Multi-Area Spiking Network Model of Macaque Cortex on an MPI-GPU Cluster
Frontiers in neuroinformatics 16, 883333 (2022) [10.3389/fninf.2022.883333]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Stella, A. (Corresponding author)FZJ* ; Bouss, P.FZJ* ; Palm, G.FZJ* ; Grün, S.FZJ*
Comparing Surrogates to Evaluate Precisely Timed Higher-Order Spike Correlations
eNeuro 9(3), ENEURO.0505-21.2022 - (2022) [10.1523/ENEURO.0505-21.2022]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Villamar, J. (Corresponding author)FZJ* ; Gianmarco, T. ; Linssen, C.FZJ* ; Babu, P.FZJ* ; Pastorelli, E. ; Paolucci, P. S. ; Morrison, A.FZJ* ; Diesmann, M.FZJ* ; Golosio, B. ; Senk, J.FZJ*
NEST is on the road to GPU integration
2022NEST Conference 2022, OnlineOnline, Germany, 23 Jun 2022 - 24 Jun 20222022-06-232022-06-24 BibTeX | EndNote: XML, Text | RIS

Lecture (Invited) van Albada, S. (Corresponding author)FZJ*
Simulating the resting-state activity of monkey and human cortices at cellular resolution
2022Lecture at 9th Baltic-Nordic Summer School on Neuroinformatics (Krakow, Poland), 5 Jul 2022 - 5 Jul 20222022-07-052022-07-05 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Albers, J. (Corresponding author)FZJ* ; Pronold, J.FZJ* ; Kurth, A.FZJ* ; Vennemo, S. B. ; Haghighi Mood, K.FZJ* ; Patronis, A. ; Terhorst, D.FZJ* ; Jordan, J. ; Kunkel, S. ; Tetzlaff, T.FZJ* ; Diesmann, M.FZJ* ; Senk, J.FZJ*
beNNch – Finding Performance Bottlenecks of Neuronal Network Simulators
2022NEST Conference, virtualvirtual, Germany, 23 Jun 2022 - 24 Jun 20222022-06-232022-06-24 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) Senk, J. (Corresponding author)FZJ* ; Albers, J.FZJ*
Simulating spatially organized networks with NEST
2022EBRAINS Workshop: Brain Activity across Scales and Species: Analysis of Experiments and Simulations, BASSES, RomeRome, Italy, 13 Jun 2022 - 15 Jun 20222022-06-132022-06-15 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) van Albada, S. (Corresponding author)FZJ*
Multi-area full-density spiking network models of monkey and human cortices: from anatomy to resting-state dynamics
2022Brain Activity across Scales and Species: Analysis of Experiments and Simulations, BASSES, RomeRome, Italy, 13 Jun 2022 - 15 Jun 20222022-06-132022-06-15 BibTeX | EndNote: XML, Text | RIS

Journal Article Layer, M. (Corresponding author)FZJ* ; Senk, J.FZJ* ; Essink, S.FZJ* ; van Meegen, A.FZJ* ; Bos, H. ; Helias, M.FZJ*
NNMT: Mean-Field Based Analysis Tools for Neuronal Network Models
Frontiers in neuroinformatics 16, 835657 (2022) [10.3389/fninf.2022.835657]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Menzel, M. (Corresponding author)FZJ* ; Reuter, J. A.FZJ* ; Gräßel, D.FZJ* ; Costantini, I. ; Amunts, K.FZJ* ; Axer, M.FZJ*
Automated computation of nerve fibre inclinations from 3D polarised light imaging measurements of brain tissue
Scientific reports 12(1), 4328 (2022) [10.1038/s41598-022-08140-0]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Other) van Albada, S. (Corresponding author)FZJ* ; Dickscheid, T.FZJ* ; van Meegen, A.FZJ*
Cellular, connectional and molecular heterogeneity in a large-scale computational model of the human cerebral cortex
2022SPP-2041 Status Meeting, onlineonline, online, 29 Mar 2022 - 30 Mar 20222022-03-292022-03-30 BibTeX | EndNote: XML, Text | RIS

Journal Article Albers, J. (Corresponding author)FZJ* ; Pronold, J.FZJ* ; Kurth, A.FZJ* ; Vennemo, S. B.Extern* ; Mood, K. H.FZJ* ; Patronis, A.FZJ* ; Terhorst, D.FZJ* ; Jordan, J.Extern* ; Kunkel, S.Extern* ; Tetzlaff, T.FZJ* ; Diesmann, M.FZJ* ; Senk, J.FZJ*
A Modular Workflow for Performance Benchmarking of Neuronal Network Simulations
Frontiers in neuroinformatics 16, 837549 (2022) [10.3389/fninf.2022.837549]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Caspers, S. (Corresponding author)FZJ* ; Axer, M.FZJ* ; Gräßel, D.FZJ* ; Amunts, K.FZJ*
Additional fiber orientations in the sagittal stratum—noise or anatomical fine structure?
Brain structure & function 227, 1331–1345 (2022) [10.1007/s00429-021-02439-w]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Bittner, N. (Corresponding author)FZJ* ; Korf, H.-W. ; Stumme, J.FZJ* ; Jockwitz, C.FZJ* ; Moebus, S. ; Schmidt, B. ; Dragano, N. ; Caspers, S.FZJ*
Multimodal investigation of the association between shift work and the brain in a population-based sample of older adults
Scientific reports 12(1), 2969 (2022) [10.1038/s41598-022-05418-1]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Kiwitz, K. (Corresponding author)FZJ* ; Brandstetter, A.FZJ* ; Schiffer, C.FZJ* ; Bludau, S.FZJ* ; Mohlberg, H.FZJ* ; Omidyeganeh, M. ; Massicotte, P. ; Amunts, K.FZJ*
Cytoarchitectonic Maps of the Human Metathalamus in 3D Space
Frontiers in neuroanatomy 16, 837485 (2022) [10.3389/fnana.2022.837485]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Herbers, P.FZJ* ; Calvo, I. ; Diaz, S. (Corresponding author)FZJ* ; Robles Sanchez, O. D. ; Mata, S. ; Toharia, P. ; Pastor, L. ; Peyser, A.FZJ* ; Morrison, A.FZJ* ; Klijn, W. (Corresponding author)FZJ*
ConGen a simulator-agnostic visual language for definition and generation of connectivity in large and multiscale neural networks
Frontiers in neuroinformatics 15, 766697 (2022) [10.3389/fninf.2021.766697] special issue: "Neuroscience, Computing, Performance, and Benchmarks: Why It Matters to Neuroscience How Fast We Can Compute"2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Software Layer, M. (Corresponding author)FZJ* ; Senk, J.FZJ* ; Essink, S.FZJ* ; van Meegen, A.FZJ* ; Bos, H. ; Helias, M.FZJ*
Neuronal Network Meanfield Toolbox (NNMT) 1.0.0
[10.5281/ZENODO.5779549] Fulltext BibTeX | EndNote: XML, Text | RIS

Preprint Albers, J. (Corresponding author)FZJ* ; Pronold, J.FZJ* ; Kurth, A. C.FZJ* ; Vennemo, S. B.Extern* ; Mood, K. H.FZJ* ; Patronis, A.FZJ* ; Terhorst, D.FZJ* ; Jordan, J.Extern* ; Kunkel, S.Extern* ; Tetzlaff, T.FZJ* ; Diesmann, M.FZJ* ; Senk, J.FZJ*
A Modular Workflow for Performance Benchmarking of Neuronal Network Simulations
arXiv (2021)2021 Files Fulltext Fulltext by OpenAccess repository Fulltext by arXiv.org BibTeX | EndNote: XML, Text | RIS

Preprint Layer, M. (Corresponding author)FZJ* ; Senk, J.FZJ* ; Essink, S.FZJ* ; van Meegen, A.FZJ* ; Bos, H. ; Helias, M.FZJ*
A mean-field toolbox for spiking neuronal network model analysis
[10.1101/2021.12.14.472584] Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Other) Diaz, S. (Corresponding author)FZJ*
Simulating and analyzing the structural plasticity of the brain using HPC
2021JSC-Jahresabschlusskolloquium 2021, GermanyGermany, 16 Dec 20212021-12-16 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Outreach) Diaz, S. (Corresponding author)FZJ* ; Bachmann, C.FZJ* ; Klijn, W.FZJ*
Using EBRAINS for your use cases
2021Young Researchers Event 2021 EBRAINS for next-generation brain medicine, GermanyGermany, Germany, 27 May 2021 - 27 May 20212021-05-272021-05-27 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Other) Diaz, S. (Corresponding author)FZJ*
Simulation tools in EBRAINS
2021EBRAINS & IBRO Second Virtual Master Class on Brain Atlasing and Simulation Services, GermanyGermany, 2 Sep 2021 - 2 Sep 20212021-09-022021-09-02 BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Other) Diaz, S. (Corresponding author)FZJ*
Simulation tools in EBRAINS
2021Group seminar, BelgiumBelgium, 1 Jul 2021 - 1 Jul 20212021-07-012021-07-01 BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Other) Diaz, S. (Corresponding author)FZJ*
Simulation tools in EBRAINS
2021EBRAINS & IBRO First Virtual Master Class on Brain Atlasing and Simulation Services, GermanyGermany, 28 Jul 2021 - 28 Jul 20212021-07-282021-07-28 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Other) Diaz, S. (Corresponding author)FZJ*
Structural plasticity as a connectivity generation and optimization algorithm in neural networks
2021Group seminar, FreiburgFreiburg, Germany, 26 Nov 2021 - 26 Nov 20212021-11-262021-11-26 BibTeX | EndNote: XML, Text | RIS

Journal Article Manos, T. (Corresponding author) ; Diaz, S. (Corresponding author)FZJ* ; Tass, P. A.
Long-Term Desynchronization by Coordinated Reset Stimulation in a Neural Network Model With Synaptic and Structural Plasticity
Frontiers in physiology 12, 716556 (2021) [10.3389/fphys.2021.716556]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Hashemi, M. (Corresponding author) ; Vattikonda, A. N. ; Sip, V. ; Diaz-Pier, S.FZJ* ; Peyser, A.FZJ* ; Wang, H. ; Guye, M. ; Bartolomei, F. ; Woodman, M. M. ; Jirsa, V. K. (Corresponding author)
On the influence of prior information evaluated by fully Bayesian criteria in a personalized whole-brain model of epilepsy spread
PLoS Computational Biology 17(7), e1009129 - (2021) [10.1371/journal.pcbi.1009129]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Menzel, M. (Corresponding author)FZJ* ; Ritzkowski, M.FZJ* ; Reuter, J. A.FZJ* ; Gräßel, D.FZJ* ; Amunts, K.FZJ* ; Axer, M.FZJ*
Scatterometry Measurements With Scattered Light Imaging Enable New Insights Into the Nerve Fiber Architecture of the Brain
Frontiers in neuroanatomy 15, 767223 (2021) [10.3389/fnana.2021.767223]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Genon, S. (Corresponding author)FZJ* ; Bernhardt, B. C. ; La Joie, R. ; Amunts, K.FZJ* ; Eickhoff, S. B.FZJ*
The many dimensions of human hippocampal organization and (dys)function
Trends in neurosciences 44(12), 977-989 (2021) [10.1016/j.tins.2021.10.003]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Plenary/Keynote) Korcsak-Gorzo, A. (Corresponding author)FZJ* ; Müller, M. G. ; Baumbach, A. ; Leng, L. ; Breitwieser, O. J. ; van Albada, S.FZJ* ; Senn, W. ; Meier, K. ; Legenstein, R. ; Petrovici, M. A.
Cortical oscillations support sampling-based computations in spiking neural networks
2021ACAIN conference, GrasmereGrasmere, UK, 4 Oct 2021 - 8 Oct 20212021-10-042021-10-08 BibTeX | EndNote: XML, Text | RIS

Journal Article Eickhoff, C. R.FZJ* ; Hoffstaedter, F.FZJ* ; Caspers, J. ; Reetz, K.FZJ* ; Mathys, C. ; Dogan, I. ; Amunts, K.FZJ* ; Schnitzler, A. ; Eickhoff, S. B. (Corresponding author)FZJ*
Advanced brain aging in Parkinson’s disease is related to disease duration and individual impairment
Brain communications 3(3), fcab191 (2021) [10.1093/braincomms/fcab191]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Plenary/Keynote) Senk, J. (Corresponding author)FZJ* ; Korvasová, K. ; Schuecker, J. ; Hagen, E. ; Tetzlaff, T.FZJ* ; Diesmann, M.FZJ* ; Helias, M.FZJ*
Conditions for wave trains in spiking neural networks
2021NEST Conference 2021, onlineonline, online, 28 Jun 2021 - 29 Jun 20212021-06-282021-06-29 (2021)2021 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Plenary/Keynote) Korcsak-Gorzo, A. (Corresponding author)FZJ* ; Stapmanns, J.FZJ* ; Valverde, J. E. ; Dahmen, D.FZJ* ; van Albada, S.FZJ* ; Bolten, M. ; Diesmann, M.FZJ*
Event-driven eligibility propagation in nest
2021virtual NEST Conference, OnlineOnline, Online, 28 Jun 2021 - 29 Jun 20212021-06-282021-06-29 BibTeX | EndNote: XML, Text | RIS

Contribution to a conference proceedings/Contribution to a book Brandstetter, A. (Corresponding author)FZJ* ; Bolakhrif, N.FZJ* ; Schiffer, C.FZJ* ; Dickscheid, T.FZJ* ; Mohlberg, H.FZJ* ; Amunts, K.FZJ*
Deep Learning-Supported Cytoarchitectonic Mapping of the Human Lateral Geniculate Body in the BigBrain
2021Brain-Inspired Computing / Amunts, Katrin (Editor)
4th International Workshop on Brain-Inspired Computing, CetraroCetraro, Italy, 15 Jul 2019 - 19 Jul 20192019-07-152019-07-19 Cham : Springer International Publishing, Lecture Notes in Computer Science 12339, 22 - 32 (2021) [10.1007/978-3-030-82427-3_2]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (After Call) Yegenoglu, A. (Corresponding author)FZJ*
Optimizing Spiking Neural Networks with Learning to Learn
2021HDS-LEE Retreat 2021, RWTH AachenRWTH Aachen, Germany, 10 Jun 2021 - 11 Jun 20212021-06-102021-06-11 BibTeX | EndNote: XML, Text | RIS

Software Linssen, C. (Corresponding author)FZJ* ; Jain, S.FZJ* ; Morrison, A.FZJ* ; Eppler, J. M.FZJ*
ODE-toolbox 2.3
Fulltext BibTeX | EndNote: XML, Text | RIS

Preprint Upschulte, E. (Corresponding author)FZJ* ; Harmeling, S. ; Amunts, K.FZJ* ; Dickscheid, T.FZJ*
Contour Proposal Networks for Biomedical Instance Segmentation
Medical image analysis 102371 - (2022)2022 Files Fulltext by OpenAccess repository Fulltext by arXiv.org BibTeX | EndNote: XML, Text | RIS

Contribution to a conference proceedings Menzel, M. (Corresponding author)FZJ*
Scatterometry on whole brain sections using Scattered Light Imaging
20212021 OSA Biophotonics Congress: Optics in the Life Sciences, VirtuellVirtuell, USA, 12 Apr 2021 - 16 Apr 20212021-04-122021-04-16 OSA Technical Digest (Optical Society of America) BTu1B.2 (2021)2021 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) Menzel, M. (Corresponding author)FZJ*
Scatterometry on whole brain sections using Scattered Light Imaging
20212021 OSA Biophotonics Congress: Optics in the Life Sciences, VirtuellVirtuell, USA, 12 Apr 2021 - 16 Apr 20212021-04-122021-04-16 BibTeX | EndNote: XML, Text | RIS

Journal Article Andlauer, T. F. M. ; Mühleisen, T. W.FZJ* ; Hoffstaedter, F.FZJ* ; Teumer, A. ; Wittfeld, K. ; Teuber, A. ; Reinbold, C. S. ; Grotegerd, D. ; Bülow, R. ; Caspers, S.FZJ* ; Dannlowski, U. ; Herms, S. ; Hoffmann, P. ; Kircher, T. ; Minnerup, H. ; Moebus, S. ; Nenadić, I. ; Teismann, H. ; Völker, U. ; Etkin, A. ; Berger, K. ; Grabe, H. J. ; Nöthen, M. M. ; Amunts, K.FZJ* ; Eickhoff, S. B.FZJ* ; Sämann, P. G. ; Müller-Myhsok, B. ; Cichon, S. (Corresponding author)FZJ*
Genetic factors influencing a neurobiological substrate for psychiatric disorders
Translational Psychiatry 11(1), 192 (2021) [10.1038/s41398-021-01317-7]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Menzel, M. (Corresponding author)FZJ* ; Reuter, J. A.FZJ* ; Gräßel, D.FZJ* ; Huwer, M.FZJ* ; Schlömer, P.FZJ* ; Amunts, K.FZJ* ; Axer, M.FZJ*
Scattered Light Imaging: Resolving the substructure of nerve fiber crossings in whole brain sections with micrometer resolution
NeuroImage 233, 117952 - (2021) [10.1016/j.neuroimage.2021.117952]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Preprint Korcsak-Gorzo, A. (Corresponding author)FZJ* ; Müller, M. G. ; Baumbach, A. ; Leng, L. ; Breitwieser, O. J. ; van Albada, S. J.FZJ* ; Senn, W. ; Meier, K. ; Legenstein, R. ; Petrovici, M. A.
Cortical oscillations implement a backbone for sampling-based computation in spiking neural networks
Files Fulltext Fulltext by OpenAccess repository Fulltext by arXiv.org BibTeX | EndNote: XML, Text | RIS

Poster (Other) Korcsak-Gorzo, A. (Corresponding author)FZJ* ; Stapmanns, J.FZJ* ; Dahmen, D.FZJ* ; van Albada, S.FZJ* ; Diesmann, M.FZJ* ; Helias, M.FZJ* ; Bolten, M. ; Hahne, J.
Event-driven updates of voltage-based learning rules
2021POF IV Kickoff, RWTH AachenJülich, RWTH Aachen, Germany, 29 Jan 2021 - 29 Jan 20212021-01-292021-01-29 BibTeX | EndNote: XML, Text | RIS

Software Linssen, C. (Corresponding author)FZJ* ; Jain, S. ; Morrison, A.FZJ* ; Eppler, J. M.FZJ*
ODE-toolbox: Automatic selection and generation of integration schemes for systems of ordinary differential equations
Fulltext BibTeX | EndNote: XML, Text | RIS

Journal Article Binder, E. ; Leimbach, M. ; Pool, E.-M. ; Volz, L. J. ; Eickhoff, S. B.FZJ* ; Fink, G. R.FZJ* ; Grefkes, C. (Corresponding author)FZJ*
Cortical reorganization after motor stroke: A pilot study on differences between the upper and lower limbs
Human brain mapping 42(4), 1013-1033 (2021) [10.1002/hbm.25275]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Schulte to Brinke, T. (Corresponding author)FZJ* ; Khalid, F.FZJ* ; Duarte, R.FZJ* ; Morrison, A.FZJ*
Processing capacity of recurrent spiking networks
2020Organisation For Computational Neuroscience - 29th Annual Computational Neuroscience Meeting, CNS2020, OnlineOnline, Online, 18 Jul 2020 - 23 Jul 20202020-07-182020-07-23 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Contribution to a conference proceedings/Contribution to a book Yegenoglu, A. (Corresponding author)FZJ* ; Krajsek, K.FZJ* ; Diaz, S.FZJ* ; Herty, M.
Ensemble Kalman Filter Optimizing Deep Neural Networks: An Alternative Approach to Non-performing Gradient Descent
2020Machine Learning, Optimization, and Data Science
The Sixth International Conference on Machine Learning, Optimization, and Data Science, LOD2020, SienaSiena, Italy, 19 Jul 2020 - 22 Jul 20202020-07-192020-07-22 Cham : Springer, Lecture Notes in Computer Science 12566, : 5th ed., 78-92 (2020) [10.1007/978-3-030-64580-9_7]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Kiwitz, K. (Corresponding author)FZJ* ; Schiffer, C.FZJ* ; Spitzer, H. ; Dickscheid, T.FZJ* ; Amunts, K.FZJ*
Deep learning networks reflect cytoarchitectonic features used in brain mapping
Scientific Report 10, 22039 (2020) [10.1038/s41598-020-78638-y]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Software Linssen, C. (Corresponding author)FZJ* ; Jain, S. ; Morrison, A.FZJ* ; Eppler, J. M.FZJ*
ODE-toolbox: Automatic selection and generation of integration schemes for systems of ordinary differential equations
Fulltext BibTeX | EndNote: XML, Text | RIS

Journal Article Pläschke, R. N. (Corresponding author)FZJ* ; Patil, K. R.FZJ* ; Cieslik, E. C.FZJ* ; Nostro, A. D. ; Varikuti, D. P. ; Plachti, A.FZJ* ; Lösche, P. ; Hoffstaedter, F.FZJ* ; Kalenscher, T. ; Langner, R.FZJ* ; Eickhoff, S. B. (Corresponding author)FZJ*
Age differences in predicting working memory performance from network-based functional connectivity
Cortex 132, 441 - 459 (2020) [10.1016/j.cortex.2020.08.012]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (Other) Kleinjohann, A. (Corresponding author)FZJ* ; Sprenger, J.FZJ* ; Essink, S.FZJ* ; Rotter, S. ; Grün, S.FZJ*
Modeling Temporally Precise Spike Artefacts to Study Their Impact on Spike Correlation Analyses
2020Bernstein Conference 2020, BerlinBerlin, Germany, 29 Sep 2020 - 1 Oct 20202020-09-292020-10-01 [10.12751/NNCN.BC2020.0095] Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Outreach) Morrison, A. (Corresponding author)FZJ*
SimLab Neuroscience: Bernstein Facility for High Performance Simulation and Data Analytics
2020Bernstein Conference 2020, virtual Eventvirtual Event, Germany, 29 Sep 2020 - 1 Oct 20202020-09-292020-10-01 BibTeX | EndNote: XML, Text | RIS

Journal Article Cortese, S. (Corresponding author) ; Aoki, Y. Y. (Corresponding author) ; Itahashi, T. ; Castellanos, F. X. ; Eickhoff, S. B.FZJ*
Systematic Review and Meta-analysis: Resting State Functional Magnetic Resonance Imaging Studies of Attention-Deficit/Hyperactivity Disorder
Journal of the American Academy of Child and Adolescent Psychiatry 60(1), 61-75 (2020) [10.1016/j.jaac.2020.08.014]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Plachti, A. (Corresponding author)FZJ* ; Kharabian, S.FZJ* ; Eickhoff, S. B.FZJ* ; Maleki Balajoo, S.FZJ* ; Hoffstaedter, F.FZJ* ; Varikuti, D. ; Jockwitz, C.FZJ* ; Caspers, S.FZJ* ; Amunts, K.FZJ* ; Genon, S.FZJ*
Hippocampus co-atrophy pattern in dementia deviates from covariance patterns across the lifespan
Brain 143(9), 2788 - 2802 (2020) [10.1093/brain/awaa222]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Other) Yegenoglu, A. (Corresponding author)FZJ* ; Diaz, S.FZJ* ; Krajsek, K.FZJ* ; Herty, M.
Ensemble Kalman Filter optimizing Deep Neural Networks: An alternative approach to non-performing Gradient Descent
2020The Sixth International Conference on Machine Learning, Optimization, and Data Science, LOD2020, SienaSiena, Italy, 19 Jul 2020 - 22 Jul 20202020-07-192020-07-22 BibTeX | EndNote: XML, Text | RIS

Journal Article Amunts, K. (Corresponding author)FZJ* ; Mohlberg, H. (Corresponding author)FZJ* ; Bludau, S.FZJ* ; Zilles, K.FZJ*
Julich-Brain: A 3D probabilistic atlas of the human brain’s cytoarchitecture
Science 369(6506), 988-992 (2020) [10.1126/science.abb4588]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Liu, X.FZJ* ; Eickhoff, S. B.FZJ* ; Hoffstaedter, F.FZJ* ; Genon, S.FZJ* ; Caspers, S.FZJ* ; Reetz, K.FZJ* ; Dogan, I. ; Eickhoff, C. R.FZJ* ; Chen, J.FZJ* ; Caspers, J. ; Reuter, N.FZJ* ; Mathys, C. ; Aleman, A. ; Jardri, R. ; Riedl, V. ; Sommer, I. E. ; Patil, K. R. (Corresponding author)FZJ*
Joint Multi-modal Parcellation of the Human Striatum: Functions and Clinical Relevance
Neuroscience bulletin 36(10), 1123-1136 (2020) [10.1007/s12264-020-00543-1]2020 Embargoed OpenAccess Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (After Call) van Albada, S. (Corresponding author)FZJ* ; Morales-Gregorio, A.FZJ* ; van Meegen, A.FZJ* ; Pronold, J.FZJ* ; Korcsak-Gorzo, A.FZJ* ; Vollenbröker, H.FZJ* ; Bakker, R.FZJ* ; Vennemo, S. B.FZJ* ; Mørk, H. B. ; Albers, J.FZJ* ; Plesser, H. E.FZJ* ; Diesmann, M.FZJ*
Large-scale spiking network models of primate cortex as research platforms
202029th Annual Computational Neuroscience Meeting, CNS*2020, onlineonline, online, 18 Jul 2020 - 22 Jul 20202020-07-182020-07-22 BibTeX | EndNote: XML, Text | RIS

Software Linssen, C. (Corresponding author)FZJ* ; Morrison, A.FZJ* ; Eppler, J. M.FZJ*
ODE-toolbox: Automatic selection and generation of integration schemes for systems of ordinary differential equations
[10.5281/ZENODO.3822082] Fulltext BibTeX | EndNote: XML, Text | RIS

Journal Article Senk, J. (Corresponding author)FZJ* ; Korvasová, K.FZJ* ; Schuecker, J. ; Hagen, E. ; Tetzlaff, T.FZJ* ; Diesmann, M.FZJ* ; Helias, M.FZJ*
Conditions for wave trains in spiking neural networks
Physical review research 2(2), 023174 (2020) [10.1103/PhysRevResearch.2.023174]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Kharabian Masouleh, S. (Corresponding author)FZJ* ; Eickhoff, S. B.FZJ* ; Zeighami, Y. ; Lewis, L. B. ; Dahnke, R. ; Gaser, C. ; Chouinard-Decorte, F. ; Lepage, C. ; Scholtens, L. H. ; Hoffstaedter, F.FZJ* ; Glahn, D. C. ; Blangero, J. ; Evans, A. C. ; Genon, S.FZJ* ; Valk, S. L.FZJ*
Influence of Processing Pipeline on Cortical Thickness Measurement
Cerebral cortex 30(9), 5014–5027 (2020) [10.1093/cercor/bhaa097]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Amunts, J. (Corresponding author)FZJ* ; Camilleri, J.FZJ* ; Eickhoff, S. B.FZJ* ; Heim, S.FZJ* ; Weis, S.FZJ*
Executive functions predict verbal fluency scores in healthy participants
Scientific reports 10(1), 11141 (2020) [10.1038/s41598-020-65525-9]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Bellucci, G. (Corresponding author) ; Camilleri, J.FZJ* ; Iyengar, V. ; Eickhoff, S. B.FZJ* ; Krueger, F. (Corresponding author)
The Emerging Neuroscience of Social Punishment: Meta-Analytic Evidence
Neuroscience & biobehavioral reviews 113, 426-439 (2020) [10.1016/j.neubiorev.2020.04.011]2020 Embargoed OpenAccess Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Poudel, R. ; Riedel, M. C. ; Salo, T. ; Flannery, J. S. ; Hill-Bowen, L. D. ; Eickhoff, S. B.FZJ* ; Laird, A. R. ; Sutherland, M. T. (Corresponding author)
Common and distinct brain activity associated with risky and ambiguous decision-making
Drug and alcohol dependence 209, 107884 - (2020) [10.1016/j.drugalcdep.2020.107884]2020 Embargoed OpenAccess Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Software Linssen, C. (Corresponding author)FZJ* ; Rumpe, B. ; Berns, S. ; Fardet, T. ; Perun, K. ; Schulte to Brinke, T.FZJ* ; Terhorst, D.FZJ* ; Eppler, J. M.FZJ* ; Morrison, A.FZJ*
NESTML 3.1
Fulltext BibTeX | EndNote: XML, Text | RIS

Poster (Other) Kurth, A. (Corresponding author)FZJ* ; Morales-Gregorio, A.FZJ* ; van Meegen, A.FZJ* ; Pronold, J.FZJ* ; Korcsak-Gorzo, A.FZJ* ; Vollenbröker, H.FZJ* ; Bakker, R.FZJ* ; Diesmann, M.FZJ* ; van Albada, S.FZJ*
Multi-area model of macaque cortex as a scaffold model and workflow testcase
2020Human Brain Project Summit 2020, AthensAthens, Greece, 3 Feb 2020 - 6 Feb 20202020-02-032020-02-06 BibTeX | EndNote: XML, Text | RIS

Journal Article Menzel, M. (Corresponding author)FZJ* ; Axer, M.FZJ* ; De Raedt, H. ; Costantini, I. ; Silvestri, L. ; Pavone, F. S. ; Amunts, K.FZJ* ; Michielsen, K.FZJ*
Toward a High-Resolution Reconstruction of 3D Nerve Fiber Architectures and Crossings in the Brain Using Light Scattering Measurements and Finite-Difference Time-Domain Simulations
Physical review / X 10(2), 021002 (2020) [10.1103/PhysRevX.10.021002]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Software Layer, M.FZJ* ; Senk, J. (Corresponding author)FZJ* ; Essink, S.FZJ* ; Korvasová, K.FZJ* ; van Meegen, A.FZJ* ; Bos, H. ; Schücker, J. ; Helias, M.FZJ*
LIF Meanfield Tools
Fulltext BibTeX | EndNote: XML, Text | RIS

Software Senk, J. (Corresponding author)FZJ* ; Korvasová, K.FZJ* ; Schuecker, J. ; Hagen, E. ; Tetzlaff, T.FZJ* ; Diesmann, M.FZJ* ; Helias, M.FZJ*
Wave trains
Fulltext BibTeX | EndNote: XML, Text | RIS

Software Fardet, T. ; Vennemo, S. B. ; Mitchell, J.FZJ* ; Mørk, H. ; Graber, S.FZJ* ; Hahne, J. ; Spreizer, S.FZJ* ; Deepu, R.FZJ* ; Trensch, G.FZJ* ; Weidel, P.FZJ* ; Jordan, J.FZJ* ; Eppler, J. M.FZJ* ; Terhorst, D.FZJ* ; Morrison, A. (Corresponding author)FZJ* ; Linssen, C.FZJ* ; Antonietti, A. ; Dai, K. ; Serenko, A. ; Cai, B. ; Kubaj, P. ; Gutzen, R.FZJ* ; Jiang, H. ; Kitayama, I.FZJ* ; Jürgens, B. ; Plesser, H. E.FZJ*
NEST 2.20.0
[10.5281/ZENODO.3605514] BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Eppler, J. M. (Corresponding author)FZJ* ; Mørk, H. ; Morrison, A.FZJ* ; Kunkel, S. ; Linssen, C.FZJ* ; Plesser, H. E.FZJ* ; Vennemo, S. B.
NEST3 and NESTML: You'll love the new NEST user experience
2020Human Brain Project Summit 2020, AthensAthens, Greece, 4 Feb 2020 - 6 Feb 20202020-02-042020-02-06 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) Linssen, C. (Corresponding author)FZJ* ; Eppler, J. M.FZJ*
NEST simulator: single point neuron and networks
2020Hackathon on Cerebellum Modelling, PaviaPavia, Italy, 13 Jan 2020 - 15 Jan 20202020-01-132020-01-15 BibTeX | EndNote: XML, Text | RIS

Journal Article McTeague, L. M. ; Rosenberg, B. M. ; Lopez, J. W. ; Carreon, D. M. ; Huemer, J. ; Jiang, Y. ; Chick, C. F. ; Eickhoff, S.FZJ* ; Etkin, A. (Corresponding author)
Identification of Common Neural Circuit Disruptions in Emotional Processing Across Psychiatric Disorders
The American journal of psychiatry 177(5), 411-421 (2020) [10.1176/appi.ajp.2019.18111271]2020 Embargoed OpenAccess Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) Linssen, C. (Corresponding author)FZJ*
NEST Simulator: single point neuron and networks
2020Hackathon on Cerebellum Modelling, PaviaPavia, Italy, 13 Jan 2020 - 15 Jan 20202020-01-132020-01-15 BibTeX | EndNote: XML, Text | RIS

Journal Article Chen, J.FZJ* ; Patil, K. R.FZJ* ; Weis, S.FZJ* ; Sim, K. ; Nickl-Jockschat, T. ; Zhou, J. ; Aleman, A. ; Sommer, I. E. ; Liemburg, E. J. ; Hoffstaedter, F.FZJ* ; Habel, U.FZJ* ; Derntl, B. ; Liu, X. ; Kogler, L. ; Regenbogen, C. ; Diwadkar, V. A. ; Stanley, J. A. ; Riedl, V. ; Jardri, R. ; Gruber, O. ; Sotiras, A. ; Davatzikos, C. ; Eickhoff, S. (Corresponding author)FZJ*
Neurobiological divergence of the positive and negative schizophrenia subtypes identified upon a new factor-structure of psychopathology using non-negative factorization: An international machine-learning study
Biological psychiatry 83(3), 282-293 (2020) [10.1016/j.biopsych.2019.08.031]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Weis, S. (Corresponding author)FZJ* ; Patil, K. R.FZJ* ; Hoffstaedter, F.FZJ* ; Nostro, A. ; Yeo, B. T. T. ; Eickhoff, S. B.FZJ*
Sex Classification by Resting State Brain Connectivity
Cerebral cortex 30(2), 824-835 (2020) [10.1093/cercor/bhz129]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Lecture (Other) Trensch, G. (Corresponding author)FZJ* ; Klijn, W.FZJ*
Software Development in Science
2019Lecture at Jülich Supercomputing Centre (Jülich, Germany), 19 Nov 2019 - 20 Nov 20192019-11-192019-11-20 BibTeX | EndNote: XML, Text | RIS

Poster (Other) Takemura, H. (Corresponding author) ; Palomero-Gallagher, N.FZJ* ; Axer, M.FZJ* ; Grässel, D.FZJ* ; Jorgensen, M. J. ; Woods, R. ; Zilles, K.FZJ*
Ultra high-resolution mapping of occipital white matter tracts disentangles current controversies
2019Annual Meeting of the Organization of Human Brain Mapping (OHBM), RomeRome, Italy, 9 Jun 2019 - 13 Jun 20192019-06-092019-06-13 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (Other) Schiffer, C. (Corresponding author)FZJ* ; Spitzer, H.FZJ* ; Kiwitz, K.FZJ* ; Amunts, K.FZJ* ; Dickscheid, T.FZJ*
Deep Learning speeds up gapless cytoarchitectonic mapping in the human brain
2019Annual Meeting of the Organization of Human Brain Mapping (OHBM), RomeRome, Italy, 9 Jun 2019 - 13 Jun 20192019-06-092019-06-13 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (Other) Huysegoms, M. (Corresponding author)FZJ* ; Oliveira, S.FZJ* ; Bludau, S.FZJ* ; Amunts, K.FZJ* ; Dickscheid, T.FZJ*
Aligning Images of Large Human Brain Sections on a Cellular Level using Bisected Cells
20192019 Annual Meeting of the Organization of Human Brain Mapping (OHBM), RomeRome, Italy, 9 Jun 2019 - 13 Jun 20192019-06-092019-06-13 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Other) Linssen, C. (Corresponding author)FZJ* ; Eppler, J. M.FZJ*
NESTML Tutorial
20192nd HPAC Platform Training, HeidelbergHeidelberg, Germany, 26 Nov 2019 - 28 Nov 20192019-11-262019-11-28 BibTeX | EndNote: XML, Text | RIS

Journal Article Zajzon, B. (Corresponding author)FZJ* ; Mahmoudian, S. ; Morrison, A.FZJ* ; Duarte, R.FZJ*
Passing the message: representation transfer in modular balanced networks
Frontiers in computational neuroscience 13, 79 (2019) [10.3389/fncom.2019.00079]2019 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Jordan, J. (Corresponding author)FZJ* ; Petrovici, M. A. ; Breitwieser, O. ; Schemmel, J. ; Meier, K. ; Diesmann, M.FZJ* ; Tetzlaff, T.FZJ*
Deterministic networks for probabilistic computing
Scientific reports 9(1), 18303 (2019) [10.1038/s41598-019-54137-7]2019 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) Peyser, A. (Corresponding author)FZJ*
Multiscale Simulations in Neuroscience: Infrastructure and Problems
20192019 Fall Multiscale Seminar Department of Applied Mathematics, Illinois Institute of TechnologyChicago, Illinois Institute of Technology, USA, 21 Oct 20192019-10-21 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article van Albada, S. (Corresponding author)FZJ* ; Korcsak-Gorzo, A.FZJ* ; Yegenoglu, A.FZJ* ; Klijn, W.FZJ* ; van Meegen, A.FZJ* ; Peyser, A.FZJ*
Spiking Neural Networks that Learn to Learn / Gepulste Neuronale Netze lernen zu lernen
Jülich : Bernstein Koordinationsstelle (BCOS) -, 8-9 (2019) special issue: "Bernstein Feature 2019"2019 Files Fulltext Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Yegenoglu, A. (Corresponding author)FZJ* ; Diaz, S.FZJ* ; Klijn, W.FZJ* ; Peyser, A.FZJ* ; Subramoney, A. ; Maas, W. ; Visconti, G. ; Herty, M.
Learning to Learn on High Performance Computing
2019Society for Neuroscience Meeting 2019, ChicagoChicago, USA, 19 Oct 2019 - 23 Oct 20192019-10-192019-10-23 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (After Call) Klijn, W. (Corresponding author)FZJ* ; Peyser, A.FZJ* ; Diaz, S.FZJ* ; Morrison, A.FZJ*
Staged deployment of interactive multi-application HPC workflows
2019The 2019 International Conference on High Performance Computing & Simulation, DublinDublin, Ireland, 15 Jul 2019 - 19 Jul 20192019-07-152019-07-19 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Software Jordan, J.FZJ* ; Mørk, H. ; Vennemo, S. B. ; Terhorst, D.FZJ* ; Peyser, A.FZJ* ; Ippen, T. ; Deepu, R.FZJ* ; Eppler, J. M.FZJ* ; van Meegen, A.FZJ* ; Kunkel, S. ; Sinha, A. ; Fardet, T. ; Diaz, S.FZJ* ; Morrison, A.FZJ* ; Schenck, W. ; Dahmen, D.FZJ* ; Pronold, J.FZJ* ; Stapmanns, J.FZJ* ; Trensch, G.FZJ* ; Spreizer, S.FZJ* ; Mitchell, J.FZJ* ; Graber, S.FZJ* ; Senk, J.FZJ* ; Linssen, C.FZJ* ; Hahne, J. ; Serenko, A. ; Naoumenko, D. ; Thomson, E. ; Kitayama, I.FZJ* ; Berns, S. ; Plesser, H. E. (Corresponding author)FZJ*
NEST 2.18.0
Fulltext BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Other) Linssen, C. (Corresponding author)FZJ* ; Eppler, J. M.FZJ*
NESTML Tutorial
2019NEST Conference 2019: A Forum for Users and Developers, AasAas, Norway, 24 Jun 2019 - 25 Jun 20192019-06-242019-06-25 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Linssen, C. (Corresponding author)FZJ* ; Eppler, J. M.FZJ* ; Morrison, A.FZJ*
NESTML: An extensible modeling language for biologically plausible neural networks
2019NEST Conference 2019: A Forum for Users and Developers, AasAas, Norway, 24 Jun 2019 - 25 Jun 20192019-06-242019-06-25 BibTeX | EndNote: XML, Text | RIS

Preprint Senk, J. (Corresponding author)FZJ* ; Korvasová, K.FZJ* ; Schuecker, J. ; Hagen, E. ; Tetzlaff, T.FZJ* ; Diesmann, M.FZJ* ; Helias, M.FZJ*
Conditions for wave trains in spiking neural networks
Files Fulltext Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Sprenger, J. (Corresponding author)FZJ*RWTH* ; Zehl, L.FZJ*RWTH* ; Pick, J.FZJ* ; Sonntag, M. ; Grewe, J. ; Wachtler, T.Extern* ; Grün, S.FZJ*RWTH* ; Denker, M.FZJ*RWTH*
odMLtables: A User-Friendly Approach for Managing Metadata of Neurophysiological Experiments
Frontiers in neuroinformatics 13, 62 (2019) [10.3389/fninf.2019.00062]2019 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (Other) Manos, T. (Corresponding author)FZJ* ; Diaz, S.FZJ* ; Hoffstaedter, F.FZJ* ; Schreiber, J.FZJ* ; Eickhoff, S.FZJ* ; Popovych, O.FZJ*
Impact of brain parcellation on parameter optimization of the whole-brain dynamical models
2019Organization for Human Brain Mapping 2019, OHBM 2019, RomeRome, Italy, 9 Jun 2019 - 13 Jun 20192019-06-092019-06-13 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Peyser, A. (Corresponding author)FZJ* ; Diaz, S.FZJ* ; Klijn, W.FZJ* ; Morrison, A.FZJ* ; Triesch, J.
Editorial: Linking experimental and computational connectomics
Network neuroscience 3(4), 902-904 (2019) [10.1162/netn_e_00108]2019 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Preprint Bachmann, C. (Corresponding author)FZJ* ; Tetzlaff, T.FZJ* ; Duarte, R.FZJ* ; Morrison, A.FZJ*
Firing rate homeostasis counteracts changes in stability of recurrent neural networks caused by synapse loss in Alzheimer's disease
{1909.01012 [q-bio.NC] (2019)2019 Files Fulltext Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Other) Menzel, M. (Corresponding author)FZJ* ; Axer, M.FZJ* ; Amunts, K.FZJ* ; De Raedt, H.FZJ* ; Michielsen, K.FZJ*
Transmittance and Diattenuation of Brain Tissue Explained by Finite-Difference Time-Domain Simulations
20193rd HBP Student Conference, Ghent UniversityGhent University, Belgium, 6 Feb 2019 - 7 Feb 20192019-02-062019-02-07 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (After Call) Kühn, T. (Corresponding author)FZJ* ; Stapmanns, J.FZJ* ; Dahmen, D.FZJ* ; Honerkamp, C. ; Helias, M.FZJ*
Functional Renormalization Group for Stochastic Rate Neurons
2019DPG Spring Meeting, Section Condensed Matter, RegensburgRegensburg, Germany, 31 Mar 2019 - 5 Apr 20192019-03-312019-04-05 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Tahmasian, M. (Corresponding author) ; Sepehry, A. A. ; Samea, F. ; Khodadadifar, T. ; Soltaninejad, Z. ; Javaheripour, N. ; Khazaie, H. ; Zarei, M. ; Eickhoff, S. B.FZJ* ; Eickhoff, C. R.FZJ*
Practical recommendations to conduct a neuroimaging meta‐analysis for neuropsychiatric disorders
Human brain mapping 40(17), 5142-5154 (2019) [10.1002/hbm.24746]2019 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) Linssen, C. (Corresponding author)FZJ* ; Eppler, J. M.FZJ* ; Morrison, A.FZJ*
NESTML: A domain-specific language for biologically realistic neuron and synapse models
2019The Computational Modeling in Biology Network 2019, COMBINE 2019, HeidelbergHeidelberg, Germany, 15 Jul 2019 - 19 Jul 20192019-07-152019-07-19 BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) Kühn, T. (Corresponding author)FZJ*
(Mean-)Field Theory Methods in Neuroscience
2019Seminar, ENS, Paris