Supercomputing and Modeling for the Human Brain

All Publications

Journal Article - Online First Jockwitz, C. (Corresponding author)FZJ* ; Krämer, C.FZJ* ; Dellani, P.FZJ* ; Caspers, S.FZJ*
Differential predictability of cognitive profiles from brain structure in older males and females
GeroScience -, - (2023) [10.1007/s11357-023-00934-y]2023 BibTeX | EndNote: XML, Text | RIS

Preprint Senk, J. (Corresponding author)FZJ* ; Hagen, E. ; van Albada, S.FZJ* ; Diesmann, M.FZJ*
Reconciliation of weak pairwise spike-train correlations and highly coherent local field potentials across space
arXiv (2023) [10.48550/arXiv.1805.10235]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) van Albada, S. (Corresponding author)FZJ*
Estimating the primate cortical mesoconnectome to predict resting-state activity via large-scale simulations
2023Bernstein Conference Workshop, BerlinBerlin, Germany, 26 Sep 2023 - 29 Sep 20232023-09-262023-09-29 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Kleinjohann, A. (Corresponding author)FZJ* ; Sprenger, J. ; Barthélemy, F.FZJ* ; Grün, S.FZJ* ; Denker, M.FZJ*
Data and metadata acquisition workﬂows as a basis for collaborative science
2023Bernstein Conference 2023, BerlinBerlin, Germany, 26 Sep 2023 - 29 Sep 20232023-09-262023-09-29 [10.12751/NNCN.BC2023.195] Fulltext BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Krauße, S. (Corresponding author)FZJ* ; Gutzen, R.FZJ* ; Stella, A.FZJ* ; Brochier, T. ; Riehle, A.FZJ* ; Grün, S.FZJ* ; Denker, M.FZJ*
Relating the orientation of cortical traveling waves and co-occurring spike patterns
2023Bernstein Conference 2023, bernstein2023, BerlinBerlin, Germany, 26 Sep 2023 - 30 Sep 20232023-09-262023-09-30 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Ito, J. (Corresponding author)FZJ* ; Grün, S.FZJ*
A method for detecting spatio-temporal patterns of neuronal spikes based on principal component analysis
2023Bernstein Conference 2023, BerlinBerlin, Germany, 26 Sep 2023 - 29 Sep 20232023-09-262023-09-29 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Gutzen, R. (Corresponding author)FZJ* ; Brochier, T. ; Riehle, A.FZJ* ; Grün, S.FZJ* ; Denker, M.FZJ*
Cortical wave dynamics across visual areas of the macaque monkey during an instructed, free-viewing, visuomotor task
2023Bernstein Conference, BerlinBerlin, Germany, 27 Sep 2023 - 29 Sep 20232023-09-272023-09-29 BibTeX | EndNote: XML, Text | RIS

Book/Dissertation / PhD Thesis Yegenoglu, A. (Corresponding author)FZJ*
Gradient-Free Optimization of Artificial and Biological Networks using Learning to Learn
Jülich : Forschungszentrum Jülich GmbH, Central Library, Publishing House, IAS Series 55, 149 pp. (2023) [10.34734/FZJ-2023-03569]2023 = Dissertation, RWTH Aachen, 2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Conference Presentation (After Call) Gutzen, R.FZJ*
Exploring the diversity of cortical wave activity with a unifying workflow approach
2023Concluding Event of the Human Brain Project, JülichJülich, Germany, 12 Sep 2023 - 13 Sep 20232023-09-122023-09-13 BibTeX | EndNote: XML, Text | RIS

Journal Article Golosio, B. ; Villamar, J.FZJ* ; Tiddia, G. (Corresponding author) ; Pastorelli, E. ; Stapmanns, J. ; Fanti, V. ; Paolucci, P. S. ; Morrison, A.FZJ* ; Senk, J.FZJ*
Runtime Construction of Large-Scale Spiking Neuronal Network Models on GPU Devices
Applied Sciences 13(17), 9598, 29 pages (2023) [10.3390/app13179598]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Preprint Golosio, B. ; Villamar, J.FZJ* ; Tiddia, G. (Corresponding author) ; Pastorelli, E. ; Stapmanns, J. ; Fanti, V. ; Paolucci, P. S. ; Morrison, A.FZJ* ; Senk, J.FZJ*
Runtime Construction of Large-Scale Spiking Neuronal Network Models on GPU Devices
arXiv (2023) [10.34734/FZJ-2023-03232]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Conference Presentation (After Call) Villamar, J. (Corresponding author)FZJ* ; Golosio, B. ; Tiddia, G. ; Pastorelli, E. ; Stapmanns, J. ; Fanti, V. ; Diesmann, M.FZJ* ; Paolucci, P. S. ; Morrison, A.FZJ* ; Senk, J.FZJ*
Accelerating Neuronal Network Construction through Dynamic GPU Memory Instantiation
2023NEST Conference, VirtualVirtual, Germany, 15 Jun 2023 - 16 Jun 20232023-06-152023-06-16 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Nieto, N. (Corresponding author)FZJ* ; Raimondo, F.FZJ* ; Patil, K.FZJ*
JuHarmonize: Leakage-free data harmonization
2023Organization for Human Brain Mapping (OHBM), MontrealMontreal, Canada, 22 Jul 2023 - 26 Jul 20232023-07-222023-07-26 [10.34734/FZJ-2023-03220] OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Jung, K. (Corresponding author)FZJ* ; Florin, E. ; Patil, K.FZJ* ; Caspers, J. ; Rubbert, C. ; Eickhoff, S.FZJ* ; Popovych, O.FZJ*
Whole-brain dynamical modeling for classification of Parkinson's disease
2023Organization for Human Brain Mapping (OHBM), MontrealMontreal, Canada, 22 Jul 2023 - 26 Jul 20232023-07-222023-07-26 [10.34734/FZJ-2023-03046] OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Hamdan, S. (Corresponding author)FZJ* ; Love, B. C. ; Polier, G. v. ; Weis, S.FZJ* ; Schwender, H. ; Eickhoff, S.FZJ* ; Patil, K.FZJ*
Cofound-Leakage: Confound Removal In Machine Learning Leads To Leakage
2023Organization for Human Brain Mapping (OHBM), MontrealMontreal, Canada, 22 Jul 2023 - 26 Jul 20232023-07-222023-07-26 [10.34734/FZJ-2023-03045] OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Heckner, M. (Corresponding author)FZJ* ; Cieslik, E.FZJ* ; Paas Oliveros, L. K.FZJ* ; Eickhoff, S.FZJ* ; Patil, K.FZJ* ; Langner, R.FZJ*
Predicting Executive Functioning from Brain Networks: Modality Specificity and Age Effects
2023Organization for Human Brain Mapping (OHBM), MontrealMontreal, Canada, 22 Jul 2023 - 26 Jul 20232023-07-222023-07-26 [10.34734/FZJ-2023-03043] OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Lecture (After Call) Denker, M. (Corresponding author)FZJ* ; Kern, M.FZJ* ; Wachtler, T. ; Gupta, R.
Using open tools to build efficient workflows for data access, management and analysis
2023Lecture at CNS 2023 (Leipzig, Germany), 15 Jul 2023 - 15 Jul 20232023-07-152023-07-15 Fulltext BibTeX | EndNote: XML, Text | RIS

Journal Article Peitz, K. (Corresponding author)FZJ* ; Stumme, J.FZJ* ; Jockwitz, C.FZJ* ; Bittner, N.FZJ* ; Caspers, S.FZJ* ; Heim, S.FZJ*
The influence of bilingualism on gray matter volume in the course of aging: a longitudinal study
Frontiers in aging neuroscience 15, 1193283 (2023) [10.3389/fnagi.2023.1193283]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Poster (Other) Dickscheid, T. (Corresponding author)FZJ* ; Bludau, S.FZJ* ; Gui, X.FZJ* ; Amunts, K.FZJ*
The siibra toolsuite – making human brain organization accessible across scales and modalities
2023Organization for Human Brain Mapping, OHBM, MontréalMontréal, Canada, 22 Jul 2023 - 26 Jul 20232023-07-222023-07-26 [10.34734/FZJ-2023-02970] OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Oberste-Frielinghaus, J. (Corresponding author)FZJ* ; Morales-Gregorio, A.FZJ* ; Essink, S.FZJ* ; Kleinjohann, A.FZJ* ; Ito, J.FZJ* ; Grün, S.FZJ*
Detection and Mitigation of Artifacts in Massively Parallel Recordings
2023CNS*2023, RWTH AachenLeipzig, RWTH Aachen, Germany, 15 Jul 2023 - 19 Jul 20232023-07-152023-07-19 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (After Call) Ito, J. (Corresponding author)FZJ* ; Gutzen, R.FZJ* ; Krauße, S.FZJ* ; Denker, M.FZJ* ; Grün, S.FZJ*
Towards classification of spatio-temporal wave patterns based on principal component analysis
202332nd Annual Computational Neuroscience Meeting, CNS2023, LeipzigLeipzig, Germany, 15 Jul 2023 - 19 Jul 20232023-07-152023-07-19 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Kleinjohann, A. (Corresponding author)FZJ* ; Berling, D. ; Stella, A.FZJ* ; Palm, G.FZJ* ; Tetzlaff, T.FZJ* ; Grün, S.FZJ*
Anatomical Network Model with Embedded Synfire Chains is Consistent with Cortical Spatio-Temporal Spike Patterns
202332nd Annual Computational Neuroscience Meeting, CNS 2023, LeipzigLeipzig, Germany, 15 Jul 2023 - 26 Jul 20232023-07-152023-07-26 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) Senk, J. (Corresponding author)FZJ* ; Hagen, E. ; van Albada, S.FZJ* ; Diesmann, M.FZJ*
A mesoscopic layered cortical network model for spiking activity and local field potentials
202332nd Annual Computational Neuroscience Meeting, CNS*2023, LeipzigLeipzig, Germany, 15 Jul 2023 - 19 Jul 20232023-07-152023-07-19 BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) van Albada, S. (Corresponding author)FZJ*
Primate brains in silico: Large-scale neural network simulations of macaque and human cortices
2023Donders Centre for Neuroscience seminar, Radboud UniversityNijmegen, Radboud University, Netherlands, 13 Jul 20232023-07-13 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Yegenoglu, A. (Corresponding author)FZJ* ; Jimenez-Romero, C.FZJ* ; Perez Martin, A.FZJ* ; van der Vlag, M.FZJ* ; Klijn, W.FZJ* ; Hater, T.FZJ* ; Morrison, A.FZJ* ; Diaz, S.FZJ*
Gradient free optimization of neuroscience models at different scales with L2L
2023HBP Summit 2023, MarseilleMarseille, France, 27 Mar 2023 - 31 Mar 20232023-03-272023-03-31 [10.34734/FZJ-2023-02678] OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Other) Yegenoglu, A. (Corresponding author)FZJ* ; van der Vlag, M. (Corresponding author)FZJ*
Introduction to High Performance Computing
2023Life Science PhD Meeting, Medizinische Universität InnsbruckInnsbruck, Medizinische Universität Innsbruck, Austria, 12 Apr 2023 - 14 Apr 20232023-04-122023-04-14 Fulltext BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Other) Yegenoglu, A. (Corresponding author)FZJ* ; van der Vlag, M. (Corresponding author)FZJ* ; Diaz, S.FZJ*
Vast parameter space exploration using Learning to Learn on EBRAINS
2023HBP Summit 2023, MarseilleMarseille, France, 27 Mar 2023 - 31 Mar 20232023-03-272023-03-31 BibTeX | EndNote: XML, Text | RIS

Journal Article Menzel, M. (Corresponding author)FZJ* ; Gräßel, D.FZJ* ; Rajkovic, I. ; Zeineh, M. M. ; Georgiadis, M.
Using light and X-ray scattering to untangle complex neuronal orientations and validate diffusion MRI
eLife 12, e84024 (2023) [10.7554/eLife.84024]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Conference Presentation (After Call) Gutzen, R. (Corresponding author)FZJ*
Adaptable workflows for neural activity analysis in an open-source environment
2023International Forum on Neural Engineering & Brain Technologies, NBT, BerlinBerlin, Germany, 20 Jun 2023 - 21 Jun 20232023-06-202023-06-21 BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) Gutzen, R. (Corresponding author)FZJ* ; Bonis, G. D. ; Paolucci, P. S. ; Denker, M.FZJ*
Collaborative Brain Wave Analysis Pipeline
2023HBP Fundraising Bootcamp, BrusselsBrussels, Belgium, 30 May 2023 - 31 May 20232023-05-302023-05-31 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) Senk, J. (Corresponding author)FZJ*
Tutorial: Modelling networks with NEST & Tutorial: Modelling cortical regions
2023EBRAINS Brain Simulation School 2023: Training on modelling neurons, circuits, and cognitive functions, Genoa, Marseille, Palma de Mallorca, Barcelona, Italy, France, Spain, 19 May 2023 - 24 May 20232023-05-192023-05-24 Fulltext BibTeX | EndNote: XML, Text | RIS

Conference / Event Korcsak-Gorzo, A. (Corresponding author)FZJ* ; Linssen, C.FZJ* ; Strohmer, B.
Plastic balanced random networks in NEST
2023Workgroup at Capo Caccia Neuromorphic Workshop, AlgheroAlghero, Italy, 30 Apr 2023 - 14 May 20232023-04-302023-05-14 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) van Albada, S. (Corresponding author)FZJ*
Large-scale spiking neural network simulations of human and non-human primate cortices
2023In2PrimateBrains Thematic Workshop 2, HeraklionHeraklion, Greece, 8 May 2023 - 12 May 20232023-05-082023-05-12 BibTeX | EndNote: XML, Text | RIS

Poster (Other) Korcsak-Gorzo, A. (Corresponding author)FZJ* ; Stapmanns, J.FZJ* ; Espinoza Valverde, J. A. ; Dahmen, D.FZJ* ; van Albada, S.FZJ* ; Bolten, M. ; Diesmann, M.FZJ*
Event-driven eligibility propagation in large-scale spiking neural networks
2023SMHB General Assembly, JülichJülich, Germany, 4 Apr 2023 - 5 Apr 20232023-04-042023-04-05 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Lahnakoski, J. (Corresponding author)FZJ* ; Dukart, J.FZJ* ; Schilbach, L.
Interaction-based phenotyping as observer-independent measures of social impairments across psychiatric disorders
2023General Assembly of the Joint Lab Supercomputing and Modeling for the Human Brain (SMHB), JülichJülich, Germany, 4 Apr 2023 - 5 Apr 20232023-04-042023-04-05 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Lecture (Invited) Denker, M. (Corresponding author)FZJ* ; Kern, M.FZJ*
Processing electrophysiological activity data using Neo, Elephant and Alpaca
2023Lecture at SMHB General Assembly (Germany), BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Kasper, J.FZJ* ; Caspers, S.FZJ* ; Lotter, L.FZJ* ; Hoffstaedter, F.FZJ* ; Eickhoff, S.FZJ* ; Dukart, J.FZJ*
Brain function - neurotransmitter co localization: Effects of aging and deviations in Parkinson’s disease
2023General Assembly of the Joint Lab Supercomputing and Modeling for the Human Brain (SMHB), JülichJülich, Germany, 4 Apr 2023 - 5 Apr 20232023-04-042023-04-05 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Omidvarnia, A. (Corresponding author)FZJ* ; Sasse, L.FZJ* ; Larabi, D.FZJ* ; Raimondo, F.FZJ* ; Hoffstaedter, F.FZJ* ; Kasper, J.FZJ* ; Dukart, J.FZJ* ; Petersen, M. ; Cheng, B. ; Thomalla, G. ; Eickhoff, S.FZJ* ; Patil, K.FZJ*
Is resting state fMRI better than individual characteristics at predicting cognition?
2023General Assembly of the Joint Lab Supercomputing and Modeling for the Human Brain (SMHB), JülichJülich, Germany, 4 Apr 2023 - 5 Apr 20232023-04-042023-04-05 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article - Online First Maleki Balajoo, S. (Corresponding author)FZJ* ; Eickhoff, S. B.FZJ* ; Masouleh, S. K. ; Plachti, A. ; Waite, L.FZJ* ; Saberi, A.FZJ* ; Bahri, M. A. ; Bastin, C. ; Salmon, E. ; Hoffstaedter, F.FZJ* ; Palomero-Gallagher, N.FZJ* ; Genon, S.FZJ*
Hippocampal metabolic subregions and networks: Behavioral, molecular, and pathological aging profiles
Alzheimer's and dementia -, alz.13056 (2023) [10.1002/alz.13056]2023 Files Fulltext BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) Denker, M. (Corresponding author)FZJ*
Improving rigor and knowledge transfer for analysis workflows in electrophysiology
2023SMHB General Assembly, JülichJülich, Germany, 5 Apr 2023 - 5 Apr 20232023-04-052023-04-05 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) van Albada, S. (Corresponding author)FZJ*
Large-scale spiking simulations of cortical resting-state activity
2023SMHB General Assembly, JülichJülich, Germany, 4 Apr 2023 - 5 Apr 20232023-04-042023-04-05 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Wiersch, L.FZJ* ; Eickhoff, S.FZJ* ; Patil, K.FZJ* ; Weis, S.FZJ*
Generalizability in sex classification models
2023General Assembly of the Joint Lab Supercomputing and Modeling for the Human Brain (SMHB), JülichJülich, Germany, 4 Apr 2023 - 5 Apr 20232023-04-042023-04-05 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Komeyer, V.FZJ* ; Eickhoff, S.FZJ* ; Grefkes, C. ; Raimondo, F.FZJ* ; Patil, K.FZJ*
The Confound Continuum: A 2D confounder assessment for AI in precision medicine
2023General Assembly of the Joint Lab Supercomputing and Modeling for the Human Brain (SMHB), JülichJülich, Germany, 4 Apr 2023 - 5 Apr 20232023-04-042023-04-05 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Preprint Pronold, J. (Corresponding author)FZJ* ; van Meegen, A. (Corresponding author)FZJ* ; Vollenbröker, H. ; Shimoura, R.FZJ* ; Senden, M. ; Hilgetag, C. C. ; Bakker, R.FZJ* ; van Albada, S. (Corresponding author)FZJ*
Multi-scale spiking network model of human cerebral cortex
bioRxiv beta (2023) [10.1101/2023.03.23.533968v1]2023 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) van Albada, S. (Corresponding author)FZJ*
From structure to activity and back in spiking cortical models
2023Networks of spiking neurons, ParisParis, France, 27 Mar 2023 - 31 Mar 20232023-03-272023-03-31 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Other) Dickscheid, T.FZJ* ; van Albada, S.FZJ*
Cellular, connectional and molecular heterogeneity in a large-scale computational model of the human cerebral cortex
2023SPP 2041 Annual Status Meeting, FrankfurtFrankfurt, Germany, 1 Mar 2023 - 2 Mar 20232023-03-012023-03-02 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Yegenoglu, A. (Corresponding author)FZJ* ; Jimenez-Romero, C.FZJ* ; Perez Martin, A.FZJ* ; van der Vlag, M.FZJ* ; Klijn, W.FZJ* ; Hater, T.FZJ* ; Morrison, A.FZJ* ; Diaz, S.FZJ*
Gradient free optimization of neuroscience models at different scales with L2L
2023CASA Kick off, JuelichJuelich, Germany, 26 Jan 2023 - 26 Jan 20232023-01-262023-01-26 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) van Albada, S. (Corresponding author)FZJ*
Simulating monkey and human cortices at cellular resolution
2023M-BIC Lecture, Maastricht UniversityMaastricht, Maastricht University, Netherlands, 6 Feb 2023 - 6 Feb 20232023-02-062023-02-06 BibTeX | EndNote: XML, Text | RIS

Journal Article Zajzon, B. (Corresponding author)FZJ* ; Dahmen, D.FZJ* ; Morrison, A.FZJ* ; Duarte, R.
Signal denoising through topographic modularity of neural circuits
eLife 12, e77009 (2023) [10.7554/eLife.77009]2023 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) van Albada, S. (Corresponding author)FZJ*
Unifying the spiking and large-scale dynamics of cortex through simulation
2023Atelier Neurosciences Computationnelles Aviesan, ParisParis, France, 13 Jan 2023 - 13 Jan 20232023-01-132023-01-13 BibTeX | EndNote: XML, Text | RIS

Journal Article Gutzen, R. (Corresponding author)FZJ* ; Grün, S.FZJ* ; Denker, M.FZJ*
Evaluating the statistical similarity of neural network activity and connectivity via eigenvector angles
Biosystems 223, 104813 (2023) [10.1016/j.biosystems.2022.104813] special issue: "Selected Papers from the 14th International Neural Coding Workshop, Seattle, Washington" (0303-2647)2023 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Krämer, C.FZJ* ; Stumme, J.FZJ* ; da Costa Campos, L. ; Rubbert, C. ; Caspers, J. ; Caspers, S.FZJ* ; Jockwitz, C. (Corresponding author)FZJ*
Classification and prediction of cognitive performance differences in older age based on brain network patterns using a machine learning approach
Network neuroscience 7(1), 122–147 (2023) [10.1162/netn_a_00275]2023 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (Other) Korcsak-Gorzo, A. (Corresponding author)FZJ* ; Stapmanns, J.FZJ* ; Espinoza Valverde, J. A. ; Dahmen, D.FZJ* ; van Albada, S.FZJ* ; Bolten, M. ; Diesmann, M.FZJ*
Eligibility propagation in large-scale neural networks
2022NIC Symposium, JülichJülich, Germany, 29 Sep 2022 - 30 Sep 20222022-09-292022-09-30 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) Senk, J. (Corresponding author)FZJ*
On concepts, correctness, and performance of network simulations
2022INCF Neuroinformatics Assembly 2022, virtualvirtual, virtual, 13 Sep 2022 - 13 Sep 20222022-09-132022-09-13 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Villamar, J. (Corresponding author)FZJ* ; Kelbling, M. ; Terhorst, D.FZJ* ; More, H.FZJ* ; Tetzlaff, T.FZJ* ; Senk, J.FZJ* ; Thober, S.
Tracking large-scale simulations through unified metadata handling
2022Helmholtz Metadata Collaboration Conference 2022, virtualvirtual, virtual, 5 Oct 2022 - 6 Oct 20222022-10-052022-10-06 BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) Diaz, S. (Corresponding author)FZJ*
User community requirements for driving innovation across Europe: JSC and SDL Neuroscience
2022HealthyCloud technical users workshop, Amsterdam, NetherlandsAmsterdam, Netherlands, Netherlands, 8 Dec 2022 - 9 Dec 20222022-12-082022-12-09 BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) Yegenoglu, A. (Corresponding author)FZJ* ; Bachmann, C.FZJ* ; Diaz, S.FZJ* ; Todt, D.FZJ*
Artificial and biological learning
2022JULAB Entdeckerwoche 2022, JülichJülich, Germany, 26 Jul 20222022-07-26 BibTeX | EndNote: XML, Text | RIS

Lecture (Other) Diaz, S. (Corresponding author)FZJ* ; Klijn, W.FZJ* ; Deepu, R.FZJ* ; Perez Martin, A.FZJ* ; Yegenoglu, A.FZJ*
Porting code from Matlab to Python
2022Lecture at Jülich Supercomputing Centre - as part of the Training Programme of Forschungszentrum Jülich (Online, Online), 6 Oct 2022 - 7 Oct 20222022-10-062022-10-07 BibTeX | EndNote: XML, Text | RIS

Lecture (Other) Diaz, S. (Corresponding author)FZJ* ; Hater, T.FZJ* ; Huisman, B.FZJ* ; Rotter, S. ; Lu, H. ; Cuntz, H. ; Schmitt, S.
Simulating plasticity in morphologically detailed neural networks with Arbor
2022Lecture at Bernstein Conference Satellite Workshops 2022 (Berlin, Germany, Germany), 13 Sep 2022 - 14 Sep 20222022-09-132022-09-14 BibTeX | EndNote: XML, Text | RIS

Lecture (Outreach) Diaz, S. (Corresponding author)FZJ* ; Bachmann, C.FZJ* ; Yegenoglu, A.FZJ* ; Klijn, W.FZJ* ; Geminiani, A. ; Özden, T.
Young Researchers using EBRAINS for tomorrow's scientific challenges
2022Lecture at HBP outreach event series (Online, Online), 18 Jul 2022 - 19 Jul 20222022-07-182022-07-19 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Panel discussion) Diaz, S. (Corresponding author)FZJ* ; van Albada, S.FZJ* ; Kunkel, S.FZJ* ; Bachmann, C.FZJ* ; Lu, H.
Women at the interface between neuroscience and high performance computing
2022Women in Neuroscience Symposium 2022, TbilisiTbilisi, Rep of Georgia, 12 Aug 2022 - 14 Aug 20222022-08-122022-08-14 BibTeX | EndNote: XML, Text | RIS

Lecture (Invited) Diaz, S. (Corresponding author)FZJ* ; Sánchez, Ó. D. R. ; Fernández, S. M.
Now you see it! Visualization and modeling tools for neuroscience on EBRAINS
2022Lecture at Workshop at the 6th HBP Student Conference (Innsbruck, online, Austria), 22 Feb 2022 - 25 Feb 20222022-02-222022-02-25 BibTeX | EndNote: XML, Text | RIS

Lecture (Invited) Diaz, S. (Corresponding author)FZJ* ; Yegenoglu, A.FZJ* ; Bachmann, C.FZJ*
Simulation of Biological Neuronal Networks
2022Lecture at University of Freiburg (Germany), 1 Aug 2022 - 5 Aug 20222022-08-012022-08-05 BibTeX | EndNote: XML, Text | RIS

Preprint Korcsak-Gorzo, A. (Corresponding author)FZJ* ; Linssen, C.FZJ* ; Albers, J.FZJ* ; Dasbach, S. (Corresponding author)FZJ* ; Duarte, R. ; Kunkel, S. ; Morrison, A.FZJ* ; Senk, J.FZJ* ; Stapmanns, J.FZJ* ; Tetzlaff, T.FZJ* ; Diesmann, M.FZJ* ; van Albada, S. J.FZJ*
Phenomenological modeling of diverse and heterogeneous synaptic dynamics at natural density
arXiv (2022) [10.48550/ARXIV.2212.05354]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Lecture (Invited) Korcsak-Gorzo, A.FZJ* ; Albers, J. (Corresponding author)FZJ*
Simulating spatially organized networks and plasticity with NEST
2022Lecture at 9th Baltic-Nordic Summer School on Neuroinformatics at Jagiellonian University (Krakow, Poland), 5 Jul 2022 - 5 Jul 20222022-07-052022-07-05 BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Other) Klijn, W. (Corresponding author)FZJ* ; Jimenez-Romero, C.FZJ* ; Sontheimer, K.FZJ* ; Fahad, M.FZJ* ; Ingles Chavez, R.FZJ* ; Oden, L.FZJ* ; Morrison, A.FZJ*
Co-simulation in the Modular Science Framework, controlling complexity
2022Simulate with EBRAINS workshop, JülichJülich, Germany, 7 Nov 2022 - 10 Nov 20222022-11-072022-11-10 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) Klijn, W. (Corresponding author)FZJ*
Challenges and opportunities for large-scale federated science and computing in the EU landscape
2022Braincomp2022 Computational Challenges of Connectivity, CetraroCetraro, Italy, 19 Sep 2022 - 22 Sep 20222022-09-192022-09-22 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) Klijn, W. (Corresponding author)FZJ*
High level view EBRAINS and HBP
2022Young Researchers using EBRAINS for tomorrow's scientific challenges, GermanyGermany, 18 Jul 20222022-07-18 BibTeX | EndNote: XML, Text | RIS

Lecture (Other) Klijn, W. (Corresponding author)FZJ*
The Web-based NEST Ecosystem on EBRAINS
2022Lecture at Austrian Neuroscience Association: EBRAINS TRAINING ON BRAIN ATLASES AND SIMULATION SERVICES (Austria), 16 Sep 2022 - 16 Sep 20222022-09-162022-09-16 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) Klijn, W. (Corresponding author)FZJ*
The Atlas and Simulation Services on EBRAINS
2022Austrian Neuroscience Association EBRAINS TRAINING ON BRAIN ATLASES AND SIMULATION SERVICES, AustriaAustria, 16 Sep 20222022-09-16 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Zachlod, D. (Corresponding author)FZJ* ; Palomero-Gallagher, N.FZJ* ; Dickscheid, T.FZJ* ; Amunts, K.FZJ*
Mapping cyto- and receptor architectonics to understand brain function and connectivity
Biological psychiatry 93(5), 471-479 (2022) [10.1016/j.biopsych.2022.09.014]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Lecture (Invited) Kern, M. (Corresponding author)FZJ* ; Denker, M.FZJ*
Elephant: a data analysis frmework for electrophysiological activity data
2022Lecture at Simulate with EBRAINS (Virtual), 10 Nov 2022 - 10 Nov 20222022-11-102022-11-10 BibTeX | EndNote: XML, Text | RIS

Journal Article Ito, J. (Corresponding author)FZJ* ; Joana, C. ; Yamane, Y. ; Fujita, I. ; Tamura, H. ; Mardonado, P. E. ; Grün, S.FZJ*
Latency shortening with enhanced sparseness and responsiveness in V1 during active visual sensing
Scientific reports 12(1), 6021 (2022) [10.1038/s41598-022-09405-4]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Yegenoglu, A. (Corresponding author)FZJ* ; Subramoney, A. ; Hater, T.FZJ* ; Jimenez-Romero, C.FZJ* ; Klijn, W.FZJ* ; Pérez Martín, A.FZJ* ; van der Vlag, M.FZJ* ; Herty, M. ; Morrison, A.FZJ* ; Diaz, S.FZJ*
Exploring Parameter and Hyper-Parameter Spaces of Neuroscience Models on High Performance Computers With Learning to Learn
Frontiers in computational neuroscience 16, 885207 (2022) [10.3389/fncom.2022.885207]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Lecture (Invited) van Albada, S. (Corresponding author)FZJ*
Large-scale spiking network models
2022Lecture at EITN Fall School (Paris, France), 24 Sep 2022 - 24 Sep 20222022-09-242022-09-24 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) van Albada, S. (Corresponding author)FZJ* ; Rowley, A.
Implementing the modular and long-tailed structure of cortex in large spiking models
2022Neuromorphic Algorithms 2022, NEAL2022, VolpriehausenVolpriehausen, Germany, 6 Sep 2022 - 8 Sep 20222022-09-062022-09-08 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) van Albada, S. (Corresponding author)FZJ*
A career between continents
2022Women in Neuroscience Symposium 2022, Tbilisi/onlineTbilisi/online, Rep of Georgia, 12 Aug 2022 - 14 Aug 20222022-08-122022-08-14 BibTeX | EndNote: XML, Text | RIS

Journal Article Tiddia, G. ; Golosio, B. (Corresponding author) ; Albers, J.FZJ* ; Senk, J.FZJ* ; Simula, F. ; Pronold, J.FZJ* ; Fanti, V. ; Pastorelli, E. ; Paolucci, P. S. ; van Albada, S. J.FZJ*
Fast Simulation of a Multi-Area Spiking Network Model of Macaque Cortex on an MPI-GPU Cluster
Frontiers in neuroinformatics 16, 883333 (2022) [10.3389/fninf.2022.883333]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Stella, A. (Corresponding author)FZJ* ; Bouss, P.FZJ* ; Palm, G.FZJ* ; Grün, S.FZJ*
Comparing Surrogates to Evaluate Precisely Timed Higher-Order Spike Correlations
eNeuro 9(3), ENEURO.0505-21.2022 - (2022) [10.1523/ENEURO.0505-21.2022]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Villamar, J. (Corresponding author)FZJ* ; Gianmarco, T. ; Linssen, C.FZJ* ; Babu, P.FZJ* ; Pastorelli, E. ; Paolucci, P. S. ; Morrison, A.FZJ* ; Diesmann, M.FZJ* ; Golosio, B. ; Senk, J.FZJ*
NEST is on the road to GPU integration
2022NEST Conference 2022, OnlineOnline, Germany, 23 Jun 2022 - 24 Jun 20222022-06-232022-06-24 BibTeX | EndNote: XML, Text | RIS

Lecture (Invited) van Albada, S. (Corresponding author)FZJ*
Simulating the resting-state activity of monkey and human cortices at cellular resolution
2022Lecture at 9th Baltic-Nordic Summer School on Neuroinformatics (Krakow, Poland), 5 Jul 2022 - 5 Jul 20222022-07-052022-07-05 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Albers, J. (Corresponding author)FZJ* ; Pronold, J.FZJ* ; Kurth, A.FZJ* ; Vennemo, S. B. ; Haghighi Mood, K.FZJ* ; Patronis, A. ; Terhorst, D.FZJ* ; Jordan, J. ; Kunkel, S. ; Tetzlaff, T.FZJ* ; Diesmann, M.FZJ* ; Senk, J.FZJ*
beNNch – Finding Performance Bottlenecks of Neuronal Network Simulators
2022NEST Conference, virtualvirtual, Germany, 23 Jun 2022 - 24 Jun 20222022-06-232022-06-24 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) Senk, J. (Corresponding author)FZJ* ; Albers, J.FZJ*
Simulating spatially organized networks with NEST
2022EBRAINS Workshop: Brain Activity across Scales and Species: Analysis of Experiments and Simulations, BASSES, RomeRome, Italy, 13 Jun 2022 - 15 Jun 20222022-06-132022-06-15 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) van Albada, S. (Corresponding author)FZJ*
Multi-area full-density spiking network models of monkey and human cortices: from anatomy to resting-state dynamics
2022Brain Activity across Scales and Species: Analysis of Experiments and Simulations, BASSES, RomeRome, Italy, 13 Jun 2022 - 15 Jun 20222022-06-132022-06-15 BibTeX | EndNote: XML, Text | RIS

Journal Article Layer, M. (Corresponding author)FZJ* ; Senk, J.FZJ* ; Essink, S.FZJ* ; van Meegen, A.FZJ* ; Bos, H. ; Helias, M.FZJ*
NNMT: Mean-Field Based Analysis Tools for Neuronal Network Models
Frontiers in neuroinformatics 16, 835657 (2022) [10.3389/fninf.2022.835657]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Menzel, M. (Corresponding author)FZJ* ; Reuter, J. A.FZJ* ; Gräßel, D.FZJ* ; Costantini, I. ; Amunts, K.FZJ* ; Axer, M.FZJ*
Automated computation of nerve fibre inclinations from 3D polarised light imaging measurements of brain tissue
Scientific reports 12(1), 4328 (2022) [10.1038/s41598-022-08140-0]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Other) van Albada, S. (Corresponding author)FZJ* ; Dickscheid, T.FZJ* ; van Meegen, A.FZJ*
Cellular, connectional and molecular heterogeneity in a large-scale computational model of the human cerebral cortex
2022SPP-2041 Status Meeting, onlineonline, online, 29 Mar 2022 - 30 Mar 20222022-03-292022-03-30 BibTeX | EndNote: XML, Text | RIS

Journal Article Albers, J. (Corresponding author)FZJ* ; Pronold, J.FZJ* ; Kurth, A.FZJ* ; Vennemo, S. B.Extern* ; Mood, K. H.FZJ* ; Patronis, A.FZJ* ; Terhorst, D.FZJ* ; Jordan, J.Extern* ; Kunkel, S.Extern* ; Tetzlaff, T.FZJ* ; Diesmann, M.FZJ* ; Senk, J.FZJ*
A Modular Workflow for Performance Benchmarking of Neuronal Network Simulations
Frontiers in neuroinformatics 16, 837549 (2022) [10.3389/fninf.2022.837549]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Caspers, S. (Corresponding author)FZJ* ; Axer, M.FZJ* ; Gräßel, D.FZJ* ; Amunts, K.FZJ*
Additional fiber orientations in the sagittal stratum—noise or anatomical fine structure?
Brain structure & function 227, 1331–1345 (2022) [10.1007/s00429-021-02439-w]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Bittner, N. (Corresponding author)FZJ* ; Korf, H.-W. ; Stumme, J.FZJ* ; Jockwitz, C.FZJ* ; Moebus, S. ; Schmidt, B. ; Dragano, N. ; Caspers, S.FZJ*
Multimodal investigation of the association between shift work and the brain in a population-based sample of older adults
Scientific reports 12(1), 2969 (2022) [10.1038/s41598-022-05418-1]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Kiwitz, K. (Corresponding author)FZJ* ; Brandstetter, A.FZJ* ; Schiffer, C.FZJ* ; Bludau, S.FZJ* ; Mohlberg, H.FZJ* ; Omidyeganeh, M. ; Massicotte, P. ; Amunts, K.FZJ*
Cytoarchitectonic Maps of the Human Metathalamus in 3D Space
Frontiers in neuroanatomy 16, 837485 (2022) [10.3389/fnana.2022.837485]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Herbers, P.FZJ* ; Calvo, I. ; Diaz, S. (Corresponding author)FZJ* ; Robles Sanchez, O. D. ; Mata, S. ; Toharia, P. ; Pastor, L. ; Peyser, A.FZJ* ; Morrison, A.FZJ* ; Klijn, W. (Corresponding author)FZJ*
ConGen a simulator-agnostic visual language for definition and generation of connectivity in large and multiscale neural networks
Frontiers in neuroinformatics 15, 766697 (2022) [10.3389/fninf.2021.766697] special issue: "Neuroscience, Computing, Performance, and Benchmarks: Why It Matters to Neuroscience How Fast We Can Compute"2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Software Layer, M. (Corresponding author)FZJ* ; Senk, J.FZJ* ; Essink, S.FZJ* ; van Meegen, A.FZJ* ; Bos, H. ; Helias, M.FZJ*
Neuronal Network Meanfield Toolbox (NNMT) 1.0.0
[10.5281/ZENODO.5779549] Fulltext BibTeX | EndNote: XML, Text | RIS

Preprint Albers, J. (Corresponding author)FZJ* ; Pronold, J.FZJ* ; Kurth, A. C.FZJ* ; Vennemo, S. B.Extern* ; Mood, K. H.FZJ* ; Patronis, A.FZJ* ; Terhorst, D.FZJ* ; Jordan, J.Extern* ; Kunkel, S.Extern* ; Tetzlaff, T.FZJ* ; Diesmann, M.FZJ* ; Senk, J.FZJ*
A Modular Workflow for Performance Benchmarking of Neuronal Network Simulations
arXiv (2021)2021 Files Fulltext Fulltext by OpenAccess repository Fulltext by arXiv.org BibTeX | EndNote: XML, Text | RIS

Preprint Layer, M. (Corresponding author)FZJ* ; Senk, J.FZJ* ; Essink, S.FZJ* ; van Meegen, A.FZJ* ; Bos, H. ; Helias, M.FZJ*
A mean-field toolbox for spiking neuronal network model analysis
[10.1101/2021.12.14.472584] Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Other) Diaz, S. (Corresponding author)FZJ*
Simulating and analyzing the structural plasticity of the brain using HPC
2021JSC-Jahresabschlusskolloquium 2021, GermanyGermany, 16 Dec 20212021-12-16 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Outreach) Diaz, S. (Corresponding author)FZJ* ; Bachmann, C.FZJ* ; Klijn, W.FZJ*
Using EBRAINS for your use cases
2021Young Researchers Event 2021 EBRAINS for next-generation brain medicine, GermanyGermany, Germany, 27 May 2021 - 27 May 20212021-05-272021-05-27 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Other) Diaz, S. (Corresponding author)FZJ*
Simulation tools in EBRAINS
2021EBRAINS & IBRO Second Virtual Master Class on Brain Atlasing and Simulation Services, GermanyGermany, 2 Sep 2021 - 2 Sep 20212021-09-022021-09-02 BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Other) Diaz, S. (Corresponding author)FZJ*
Simulation tools in EBRAINS
2021Group seminar, BelgiumBelgium, 1 Jul 2021 - 1 Jul 20212021-07-012021-07-01 BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Other) Diaz, S. (Corresponding author)FZJ*
Simulation tools in EBRAINS
2021EBRAINS & IBRO First Virtual Master Class on Brain Atlasing and Simulation Services, GermanyGermany, 28 Jul 2021 - 28 Jul 20212021-07-282021-07-28 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Other) Diaz, S. (Corresponding author)FZJ*
Structural plasticity as a connectivity generation and optimization algorithm in neural networks
2021Group seminar, FreiburgFreiburg, Germany, 26 Nov 2021 - 26 Nov 20212021-11-262021-11-26 BibTeX | EndNote: XML, Text | RIS

Journal Article Manos, T. (Corresponding author) ; Diaz, S. (Corresponding author)FZJ* ; Tass, P. A.
Long-Term Desynchronization by Coordinated Reset Stimulation in a Neural Network Model With Synaptic and Structural Plasticity
Frontiers in physiology 12, 716556 (2021) [10.3389/fphys.2021.716556]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Hashemi, M. (Corresponding author) ; Vattikonda, A. N. ; Sip, V. ; Diaz-Pier, S.FZJ* ; Peyser, A.FZJ* ; Wang, H. ; Guye, M. ; Bartolomei, F. ; Woodman, M. M. ; Jirsa, V. K. (Corresponding author)
On the influence of prior information evaluated by fully Bayesian criteria in a personalized whole-brain model of epilepsy spread
PLoS Computational Biology 17(7), e1009129 - (2021) [10.1371/journal.pcbi.1009129]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Menzel, M. (Corresponding author)FZJ* ; Ritzkowski, M.FZJ* ; Reuter, J. A.FZJ* ; Gräßel, D.FZJ* ; Amunts, K.FZJ* ; Axer, M.FZJ*
Scatterometry Measurements With Scattered Light Imaging Enable New Insights Into the Nerve Fiber Architecture of the Brain
Frontiers in neuroanatomy 15, 767223 (2021) [10.3389/fnana.2021.767223]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Genon, S. (Corresponding author)FZJ* ; Bernhardt, B. C. ; La Joie, R. ; Amunts, K.FZJ* ; Eickhoff, S. B.FZJ*
The many dimensions of human hippocampal organization and (dys)function
Trends in neurosciences 44(12), 977-989 (2021) [10.1016/j.tins.2021.10.003]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Plenary/Keynote) Korcsak-Gorzo, A. (Corresponding author)FZJ* ; Müller, M. G. ; Baumbach, A. ; Leng, L. ; Breitwieser, O. J. ; van Albada, S.FZJ* ; Senn, W. ; Meier, K. ; Legenstein, R. ; Petrovici, M. A.
Cortical oscillations support sampling-based computations in spiking neural networks
2021ACAIN conference, GrasmereGrasmere, UK, 4 Oct 2021 - 8 Oct 20212021-10-042021-10-08 BibTeX | EndNote: XML, Text | RIS

Journal Article Eickhoff, C. R.FZJ* ; Hoffstaedter, F.FZJ* ; Caspers, J. ; Reetz, K.FZJ* ; Mathys, C. ; Dogan, I. ; Amunts, K.FZJ* ; Schnitzler, A. ; Eickhoff, S. B. (Corresponding author)FZJ*
Advanced brain aging in Parkinson’s disease is related to disease duration and individual impairment
Brain communications 3(3), fcab191 (2021) [10.1093/braincomms/fcab191]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Plenary/Keynote) Senk, J. (Corresponding author)FZJ* ; Korvasová, K. ; Schuecker, J. ; Hagen, E. ; Tetzlaff, T.FZJ* ; Diesmann, M.FZJ* ; Helias, M.FZJ*
Conditions for wave trains in spiking neural networks
2021NEST Conference 2021, onlineonline, online, 28 Jun 2021 - 29 Jun 20212021-06-282021-06-29 (2021)2021 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Plenary/Keynote) Korcsak-Gorzo, A. (Corresponding author)FZJ* ; Stapmanns, J.FZJ* ; Valverde, J. E. ; Dahmen, D.FZJ* ; van Albada, S.FZJ* ; Bolten, M. ; Diesmann, M.FZJ*
Event-driven eligibility propagation in nest
2021virtual NEST Conference, OnlineOnline, Online, 28 Jun 2021 - 29 Jun 20212021-06-282021-06-29 BibTeX | EndNote: XML, Text | RIS

Contribution to a conference proceedings/Contribution to a book Brandstetter, A. (Corresponding author)FZJ* ; Bolakhrif, N.FZJ* ; Schiffer, C.FZJ* ; Dickscheid, T.FZJ* ; Mohlberg, H.FZJ* ; Amunts, K.FZJ*
Deep Learning-Supported Cytoarchitectonic Mapping of the Human Lateral Geniculate Body in the BigBrain
2021Brain-Inspired Computing / Amunts, Katrin (Editor)
4th International Workshop on Brain-Inspired Computing, CetraroCetraro, Italy, 15 Jul 2019 - 19 Jul 20192019-07-152019-07-19 Cham : Springer International Publishing, Lecture Notes in Computer Science 12339, 22 - 32 (2021) [10.1007/978-3-030-82427-3_2]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (After Call) Yegenoglu, A. (Corresponding author)FZJ*
Optimizing Spiking Neural Networks with Learning to Learn
2021HDS-LEE Retreat 2021, RWTH AachenRWTH Aachen, Germany, 10 Jun 2021 - 11 Jun 20212021-06-102021-06-11 BibTeX | EndNote: XML, Text | RIS

Software Linssen, C. (Corresponding author)FZJ* ; Jain, S.FZJ* ; Morrison, A.FZJ* ; Eppler, J. M.FZJ*
ODE-toolbox 2.3
Fulltext BibTeX | EndNote: XML, Text | RIS

Preprint Upschulte, E. (Corresponding author)FZJ* ; Harmeling, S. ; Amunts, K.FZJ* ; Dickscheid, T.FZJ*
Contour Proposal Networks for Biomedical Instance Segmentation
Medical image analysis 102371 - (2022)2022 Files Fulltext by OpenAccess repository Fulltext by arXiv.org BibTeX | EndNote: XML, Text | RIS

Contribution to a conference proceedings Menzel, M. (Corresponding author)FZJ*
Scatterometry on whole brain sections using Scattered Light Imaging
20212021 OSA Biophotonics Congress: Optics in the Life Sciences, VirtuellVirtuell, USA, 12 Apr 2021 - 16 Apr 20212021-04-122021-04-16 OSA Technical Digest (Optical Society of America) BTu1B.2 (2021)2021 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) Menzel, M. (Corresponding author)FZJ*
Scatterometry on whole brain sections using Scattered Light Imaging
20212021 OSA Biophotonics Congress: Optics in the Life Sciences, VirtuellVirtuell, USA, 12 Apr 2021 - 16 Apr 20212021-04-122021-04-16 BibTeX | EndNote: XML, Text | RIS

Journal Article Andlauer, T. F. M. ; Mühleisen, T. W.FZJ* ; Hoffstaedter, F.FZJ* ; Teumer, A. ; Wittfeld, K. ; Teuber, A. ; Reinbold, C. S. ; Grotegerd, D. ; Bülow, R. ; Caspers, S.FZJ* ; Dannlowski, U. ; Herms, S. ; Hoffmann, P. ; Kircher, T. ; Minnerup, H. ; Moebus, S. ; Nenadić, I. ; Teismann, H. ; Völker, U. ; Etkin, A. ; Berger, K. ; Grabe, H. J. ; Nöthen, M. M. ; Amunts, K.FZJ* ; Eickhoff, S. B.FZJ* ; Sämann, P. G. ; Müller-Myhsok, B. ; Cichon, S. (Corresponding author)FZJ*
Genetic factors influencing a neurobiological substrate for psychiatric disorders
Translational Psychiatry 11(1), 192 (2021) [10.1038/s41398-021-01317-7]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Menzel, M. (Corresponding author)FZJ* ; Reuter, J. A.FZJ* ; Gräßel, D.FZJ* ; Huwer, M.FZJ* ; Schlömer, P.FZJ* ; Amunts, K.FZJ* ; Axer, M.FZJ*
Scattered Light Imaging: Resolving the substructure of nerve fiber crossings in whole brain sections with micrometer resolution
NeuroImage 233, 117952 - (2021) [10.1016/j.neuroimage.2021.117952]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Preprint Korcsak-Gorzo, A. (Corresponding author)FZJ* ; Müller, M. G. ; Baumbach, A. ; Leng, L. ; Breitwieser, O. J. ; van Albada, S. J.FZJ* ; Senn, W. ; Meier, K. ; Legenstein, R. ; Petrovici, M. A.
Cortical oscillations implement a backbone for sampling-based computation in spiking neural networks
Files Fulltext Fulltext by OpenAccess repository Fulltext by arXiv.org BibTeX | EndNote: XML, Text | RIS

Poster (Other) Korcsak-Gorzo, A. (Corresponding author)FZJ* ; Stapmanns, J.FZJ* ; Dahmen, D.FZJ* ; van Albada, S.FZJ* ; Diesmann, M.FZJ* ; Helias, M.FZJ* ; Bolten, M. ; Hahne, J.
Event-driven updates of voltage-based learning rules
2021POF IV Kickoff, RWTH AachenJülich, RWTH Aachen, Germany, 29 Jan 2021 - 29 Jan 20212021-01-292021-01-29 BibTeX | EndNote: XML, Text | RIS

Software Linssen, C. (Corresponding author)FZJ* ; Jain, S. ; Morrison, A.FZJ* ; Eppler, J. M.FZJ*
ODE-toolbox: Automatic selection and generation of integration schemes for systems of ordinary differential equations
Fulltext BibTeX | EndNote: XML, Text | RIS

Journal Article Binder, E. ; Leimbach, M. ; Pool, E.-M. ; Volz, L. J. ; Eickhoff, S. B.FZJ* ; Fink, G. R.FZJ* ; Grefkes, C. (Corresponding author)FZJ*
Cortical reorganization after motor stroke: A pilot study on differences between the upper and lower limbs
Human brain mapping 42(4), 1013-1033 (2021) [10.1002/hbm.25275]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Schulte to Brinke, T. (Corresponding author)FZJ* ; Khalid, F.FZJ* ; Duarte, R.FZJ* ; Morrison, A.FZJ*
Processing capacity of recurrent spiking networks
2020Organisation For Computational Neuroscience - 29th Annual Computational Neuroscience Meeting, CNS2020, OnlineOnline, Online, 18 Jul 2020 - 23 Jul 20202020-07-182020-07-23 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Contribution to a conference proceedings/Contribution to a book Yegenoglu, A. (Corresponding author)FZJ* ; Krajsek, K.FZJ* ; Diaz, S.FZJ* ; Herty, M.
Ensemble Kalman Filter Optimizing Deep Neural Networks: An Alternative Approach to Non-performing Gradient Descent
2020Machine Learning, Optimization, and Data Science
The Sixth International Conference on Machine Learning, Optimization, and Data Science, LOD2020, SienaSiena, Italy, 19 Jul 2020 - 22 Jul 20202020-07-192020-07-22 Cham : Springer, Lecture Notes in Computer Science 12566, : 5th ed., 78-92 (2020) [10.1007/978-3-030-64580-9_7]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Kiwitz, K. (Corresponding author)FZJ* ; Schiffer, C.FZJ* ; Spitzer, H. ; Dickscheid, T.FZJ* ; Amunts, K.FZJ*
Deep learning networks reflect cytoarchitectonic features used in brain mapping
Scientific Report 10, 22039 (2020) [10.1038/s41598-020-78638-y]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Software Linssen, C. (Corresponding author)FZJ* ; Jain, S. ; Morrison, A.FZJ* ; Eppler, J. M.FZJ*
ODE-toolbox: Automatic selection and generation of integration schemes for systems of ordinary differential equations
Fulltext BibTeX | EndNote: XML, Text | RIS

Journal Article Pläschke, R. N. (Corresponding author)FZJ* ; Patil, K. R.FZJ* ; Cieslik, E. C.FZJ* ; Nostro, A. D. ; Varikuti, D. P. ; Plachti, A.FZJ* ; Lösche, P. ; Hoffstaedter, F.FZJ* ; Kalenscher, T. ; Langner, R.FZJ* ; Eickhoff, S. B. (Corresponding author)FZJ*
Age differences in predicting working memory performance from network-based functional connectivity
Cortex 132, 441 - 459 (2020) [10.1016/j.cortex.2020.08.012]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (Other) Kleinjohann, A. (Corresponding author)FZJ* ; Sprenger, J.FZJ* ; Essink, S.FZJ* ; Rotter, S. ; Grün, S.FZJ*
Modeling Temporally Precise Spike Artefacts to Study Their Impact on Spike Correlation Analyses
2020Bernstein Conference 2020, BerlinBerlin, Germany, 29 Sep 2020 - 1 Oct 20202020-09-292020-10-01 [10.12751/NNCN.BC2020.0095] Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Outreach) Morrison, A. (Corresponding author)FZJ*
SimLab Neuroscience: Bernstein Facility for High Performance Simulation and Data Analytics
2020Bernstein Conference 2020, virtual Eventvirtual Event, Germany, 29 Sep 2020 - 1 Oct 20202020-09-292020-10-01 BibTeX | EndNote: XML, Text | RIS

Journal Article Cortese, S. (Corresponding author) ; Aoki, Y. Y. (Corresponding author) ; Itahashi, T. ; Castellanos, F. X. ; Eickhoff, S. B.FZJ*
Systematic Review and Meta-analysis: Resting State Functional Magnetic Resonance Imaging Studies of Attention-Deficit/Hyperactivity Disorder
Journal of the American Academy of Child and Adolescent Psychiatry 60(1), 61-75 (2020) [10.1016/j.jaac.2020.08.014]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Plachti, A. (Corresponding author)FZJ* ; Kharabian, S.FZJ* ; Eickhoff, S. B.FZJ* ; Maleki Balajoo, S.FZJ* ; Hoffstaedter, F.FZJ* ; Varikuti, D. ; Jockwitz, C.FZJ* ; Caspers, S.FZJ* ; Amunts, K.FZJ* ; Genon, S.FZJ*
Hippocampus co-atrophy pattern in dementia deviates from covariance patterns across the lifespan
Brain 143(9), 2788 - 2802 (2020) [10.1093/brain/awaa222]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Other) Yegenoglu, A. (Corresponding author)FZJ* ; Diaz, S.FZJ* ; Krajsek, K.FZJ* ; Herty, M.
Ensemble Kalman Filter optimizing Deep Neural Networks: An alternative approach to non-performing Gradient Descent
2020The Sixth International Conference on Machine Learning, Optimization, and Data Science, LOD2020, SienaSiena, Italy, 19 Jul 2020 - 22 Jul 20202020-07-192020-07-22 BibTeX | EndNote: XML, Text | RIS

Journal Article Amunts, K. (Corresponding author)FZJ* ; Mohlberg, H. (Corresponding author)FZJ* ; Bludau, S.FZJ* ; Zilles, K.FZJ*
Julich-Brain: A 3D probabilistic atlas of the human brain’s cytoarchitecture
Science 369(6506), 988-992 (2020) [10.1126/science.abb4588]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Liu, X.FZJ* ; Eickhoff, S. B.FZJ* ; Hoffstaedter, F.FZJ* ; Genon, S.FZJ* ; Caspers, S.FZJ* ; Reetz, K.FZJ* ; Dogan, I. ; Eickhoff, C. R.FZJ* ; Chen, J.FZJ* ; Caspers, J. ; Reuter, N.FZJ* ; Mathys, C. ; Aleman, A. ; Jardri, R. ; Riedl, V. ; Sommer, I. E. ; Patil, K. R. (Corresponding author)FZJ*
Joint Multi-modal Parcellation of the Human Striatum: Functions and Clinical Relevance
Neuroscience bulletin 36(10), 1123-1136 (2020) [10.1007/s12264-020-00543-1]2020 Embargoed OpenAccess Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (After Call) van Albada, S. (Corresponding author)FZJ* ; Morales-Gregorio, A.FZJ* ; van Meegen, A.FZJ* ; Pronold, J.FZJ* ; Korcsak-Gorzo, A.FZJ* ; Vollenbröker, H.FZJ* ; Bakker, R.FZJ* ; Vennemo, S. B.FZJ* ; Mørk, H. B. ; Albers, J.FZJ* ; Plesser, H. E.FZJ* ; Diesmann, M.FZJ*
Large-scale spiking network models of primate cortex as research platforms
202029th Annual Computational Neuroscience Meeting, CNS*2020, onlineonline, online, 18 Jul 2020 - 22 Jul 20202020-07-182020-07-22 BibTeX | EndNote: XML, Text | RIS

Software Linssen, C. (Corresponding author)FZJ* ; Morrison, A.FZJ* ; Eppler, J. M.FZJ*
ODE-toolbox: Automatic selection and generation of integration schemes for systems of ordinary differential equations
[10.5281/ZENODO.3822082] Fulltext BibTeX | EndNote: XML, Text | RIS

Journal Article Senk, J. (Corresponding author)FZJ* ; Korvasová, K.FZJ* ; Schuecker, J. ; Hagen, E. ; Tetzlaff, T.FZJ* ; Diesmann, M.FZJ* ; Helias, M.FZJ*
Conditions for wave trains in spiking neural networks
Physical review research 2(2), 023174 (2020) [10.1103/PhysRevResearch.2.023174]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Kharabian Masouleh, S. (Corresponding author)FZJ* ; Eickhoff, S. B.FZJ* ; Zeighami, Y. ; Lewis, L. B. ; Dahnke, R. ; Gaser, C. ; Chouinard-Decorte, F. ; Lepage, C. ; Scholtens, L. H. ; Hoffstaedter, F.FZJ* ; Glahn, D. C. ; Blangero, J. ; Evans, A. C. ; Genon, S.FZJ* ; Valk, S. L.FZJ*
Influence of Processing Pipeline on Cortical Thickness Measurement
Cerebral cortex 30(9), 5014–5027 (2020) [10.1093/cercor/bhaa097]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Amunts, J. (Corresponding author)FZJ* ; Camilleri, J.FZJ* ; Eickhoff, S. B.FZJ* ; Heim, S.FZJ* ; Weis, S.FZJ*
Executive functions predict verbal fluency scores in healthy participants
Scientific reports 10(1), 11141 (2020) [10.1038/s41598-020-65525-9]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Bellucci, G. (Corresponding author) ; Camilleri, J.FZJ* ; Iyengar, V. ; Eickhoff, S. B.FZJ* ; Krueger, F. (Corresponding author)
The Emerging Neuroscience of Social Punishment: Meta-Analytic Evidence
Neuroscience & biobehavioral reviews 113, 426-439 (2020) [10.1016/j.neubiorev.2020.04.011]2020 Embargoed OpenAccess Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Poudel, R. ; Riedel, M. C. ; Salo, T. ; Flannery, J. S. ; Hill-Bowen, L. D. ; Eickhoff, S. B.FZJ* ; Laird, A. R. ; Sutherland, M. T. (Corresponding author)
Common and distinct brain activity associated with risky and ambiguous decision-making
Drug and alcohol dependence 209, 107884 - (2020) [10.1016/j.drugalcdep.2020.107884]2020 Embargoed OpenAccess Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Software Linssen, C. (Corresponding author)FZJ* ; Rumpe, B. ; Berns, S. ; Fardet, T. ; Perun, K. ; Schulte to Brinke, T.FZJ* ; Terhorst, D.FZJ* ; Eppler, J. M.FZJ* ; Morrison, A.FZJ*
NESTML 3.1
Fulltext BibTeX | EndNote: XML, Text | RIS

Poster (Other) Kurth, A. (Corresponding author)FZJ* ; Morales-Gregorio, A.FZJ* ; van Meegen, A.FZJ* ; Pronold, J.FZJ* ; Korcsak-Gorzo, A.FZJ* ; Vollenbröker, H.FZJ* ; Bakker, R.FZJ* ; Diesmann, M.FZJ* ; van Albada, S.FZJ*
Multi-area model of macaque cortex as a scaffold model and workflow testcase
2020Human Brain Project Summit 2020, AthensAthens, Greece, 3 Feb 2020 - 6 Feb 20202020-02-032020-02-06 BibTeX | EndNote: XML, Text | RIS

Journal Article Menzel, M. (Corresponding author)FZJ* ; Axer, M.FZJ* ; De Raedt, H. ; Costantini, I. ; Silvestri, L. ; Pavone, F. S. ; Amunts, K.FZJ* ; Michielsen, K.FZJ*
Toward a High-Resolution Reconstruction of 3D Nerve Fiber Architectures and Crossings in the Brain Using Light Scattering Measurements and Finite-Difference Time-Domain Simulations
Physical review / X 10(2), 021002 (2020) [10.1103/PhysRevX.10.021002]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Software Layer, M.FZJ* ; Senk, J. (Corresponding author)FZJ* ; Essink, S.FZJ* ; Korvasová, K.FZJ* ; van Meegen, A.FZJ* ; Bos, H. ; Schücker, J. ; Helias, M.FZJ*
LIF Meanfield Tools
Fulltext BibTeX | EndNote: XML, Text | RIS

Software Senk, J. (Corresponding author)FZJ* ; Korvasová, K.FZJ* ; Schuecker, J. ; Hagen, E. ; Tetzlaff, T.FZJ* ; Diesmann, M.FZJ* ; Helias, M.FZJ*
Wave trains
Fulltext BibTeX | EndNote: XML, Text | RIS

Software Fardet, T. ; Vennemo, S. B. ; Mitchell, J.FZJ* ; Mørk, H. ; Graber, S.FZJ* ; Hahne, J. ; Spreizer, S.FZJ* ; Deepu, R.FZJ* ; Trensch, G.FZJ* ; Weidel, P.FZJ* ; Jordan, J.FZJ* ; Eppler, J. M.FZJ* ; Terhorst, D.FZJ* ; Morrison, A. (Corresponding author)FZJ* ; Linssen, C.FZJ* ; Antonietti, A. ; Dai, K. ; Serenko, A. ; Cai, B. ; Kubaj, P. ; Gutzen, R.FZJ* ; Jiang, H. ; Kitayama, I.FZJ* ; Jürgens, B. ; Plesser, H. E.FZJ*
NEST 2.20.0
[10.5281/ZENODO.3605514] BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Eppler, J. M. (Corresponding author)FZJ* ; Mørk, H. ; Morrison, A.FZJ* ; Kunkel, S. ; Linssen, C.FZJ* ; Plesser, H. E.FZJ* ; Vennemo, S. B.
NEST3 and NESTML: You'll love the new NEST user experience
2020Human Brain Project Summit 2020, AthensAthens, Greece, 4 Feb 2020 - 6 Feb 20202020-02-042020-02-06 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) Linssen, C. (Corresponding author)FZJ* ; Eppler, J. M.FZJ*
NEST simulator: single point neuron and networks
2020Hackathon on Cerebellum Modelling, PaviaPavia, Italy, 13 Jan 2020 - 15 Jan 20202020-01-132020-01-15 BibTeX | EndNote: XML, Text | RIS

Journal Article McTeague, L. M. ; Rosenberg, B. M. ; Lopez, J. W. ; Carreon, D. M. ; Huemer, J. ; Jiang, Y. ; Chick, C. F. ; Eickhoff, S.FZJ* ; Etkin, A. (Corresponding author)
Identification of Common Neural Circuit Disruptions in Emotional Processing Across Psychiatric Disorders
The American journal of psychiatry 177(5), 411-421 (2020) [10.1176/appi.ajp.2019.18111271]2020 Embargoed OpenAccess Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) Linssen, C. (Corresponding author)FZJ*
NEST Simulator: single point neuron and networks
2020Hackathon on Cerebellum Modelling, PaviaPavia, Italy, 13 Jan 2020 - 15 Jan 20202020-01-132020-01-15 BibTeX | EndNote: XML, Text | RIS

Journal Article Chen, J.FZJ* ; Patil, K. R.FZJ* ; Weis, S.FZJ* ; Sim, K. ; Nickl-Jockschat, T. ; Zhou, J. ; Aleman, A. ; Sommer, I. E. ; Liemburg, E. J. ; Hoffstaedter, F.FZJ* ; Habel, U.FZJ* ; Derntl, B. ; Liu, X. ; Kogler, L. ; Regenbogen, C. ; Diwadkar, V. A. ; Stanley, J. A. ; Riedl, V. ; Jardri, R. ; Gruber, O. ; Sotiras, A. ; Davatzikos, C. ; Eickhoff, S. (Corresponding author)FZJ*
Neurobiological divergence of the positive and negative schizophrenia subtypes identified upon a new factor-structure of psychopathology using non-negative factorization: An international machine-learning study
Biological psychiatry 83(3), 282-293 (2020) [10.1016/j.biopsych.2019.08.031]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Weis, S. (Corresponding author)FZJ* ; Patil, K. R.FZJ* ; Hoffstaedter, F.FZJ* ; Nostro, A. ; Yeo, B. T. T. ; Eickhoff, S. B.FZJ*
Sex Classification by Resting State Brain Connectivity
Cerebral cortex 30(2), 824-835 (2020) [10.1093/cercor/bhz129]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Lecture (Other) Trensch, G. (Corresponding author)FZJ* ; Klijn, W.FZJ*
Software Development in Science
2019Lecture at Jülich Supercomputing Centre (Jülich, Germany), 19 Nov 2019 - 20 Nov 20192019-11-192019-11-20 BibTeX | EndNote: XML, Text | RIS

Poster (Other) Takemura, H. (Corresponding author) ; Palomero-Gallagher, N.FZJ* ; Axer, M.FZJ* ; Grässel, D.FZJ* ; Jorgensen, M. J. ; Woods, R. ; Zilles, K.FZJ*
Ultra high-resolution mapping of occipital white matter tracts disentangles current controversies
2019Annual Meeting of the Organization of Human Brain Mapping (OHBM), RomeRome, Italy, 9 Jun 2019 - 13 Jun 20192019-06-092019-06-13 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (Other) Schiffer, C. (Corresponding author)FZJ* ; Spitzer, H.FZJ* ; Kiwitz, K.FZJ* ; Amunts, K.FZJ* ; Dickscheid, T.FZJ*
Deep Learning speeds up gapless cytoarchitectonic mapping in the human brain
2019Annual Meeting of the Organization of Human Brain Mapping (OHBM), RomeRome, Italy, 9 Jun 2019 - 13 Jun 20192019-06-092019-06-13 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (Other) Huysegoms, M. (Corresponding author)FZJ* ; Oliveira, S.FZJ* ; Bludau, S.FZJ* ; Amunts, K.FZJ* ; Dickscheid, T.FZJ*
Aligning Images of Large Human Brain Sections on a Cellular Level using Bisected Cells
20192019 Annual Meeting of the Organization of Human Brain Mapping (OHBM), RomeRome, Italy, 9 Jun 2019 - 13 Jun 20192019-06-092019-06-13 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Other) Linssen, C. (Corresponding author)FZJ* ; Eppler, J. M.FZJ*
NESTML Tutorial
20192nd HPAC Platform Training, HeidelbergHeidelberg, Germany, 26 Nov 2019 - 28 Nov 20192019-11-262019-11-28 BibTeX | EndNote: XML, Text | RIS

Journal Article Zajzon, B. (Corresponding author)FZJ* ; Mahmoudian, S. ; Morrison, A.FZJ* ; Duarte, R.FZJ*
Passing the message: representation transfer in modular balanced networks
Frontiers in computational neuroscience 13, 79 (2019) [10.3389/fncom.2019.00079]2019 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Jordan, J. (Corresponding author)FZJ* ; Petrovici, M. A. ; Breitwieser, O. ; Schemmel, J. ; Meier, K. ; Diesmann, M.FZJ* ; Tetzlaff, T.FZJ*
Deterministic networks for probabilistic computing
Scientific reports 9(1), 18303 (2019) [10.1038/s41598-019-54137-7]2019 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) Peyser, A. (Corresponding author)FZJ*
Multiscale Simulations in Neuroscience: Infrastructure and Problems
20192019 Fall Multiscale Seminar Department of Applied Mathematics, Illinois Institute of TechnologyChicago, Illinois Institute of Technology, USA, 21 Oct 20192019-10-21 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article van Albada, S. (Corresponding author)FZJ* ; Korcsak-Gorzo, A.FZJ* ; Yegenoglu, A.FZJ* ; Klijn, W.FZJ* ; van Meegen, A.FZJ* ; Peyser, A.FZJ*
Spiking Neural Networks that Learn to Learn / Gepulste Neuronale Netze lernen zu lernen
Jülich : Bernstein Koordinationsstelle (BCOS) 2019, 8-9 (2019) special issue: "Bernstein Feature 2019"2019 Files Fulltext Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Yegenoglu, A. (Corresponding author)FZJ* ; Diaz, S.FZJ* ; Klijn, W.FZJ* ; Peyser, A.FZJ* ; Subramoney, A. ; Maas, W. ; Visconti, G. ; Herty, M.
Learning to Learn on High Performance Computing
2019Society for Neuroscience Meeting 2019, ChicagoChicago, USA, 19 Oct 2019 - 23 Oct 20192019-10-192019-10-23 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (After Call) Klijn, W. (Corresponding author)FZJ* ; Peyser, A.FZJ* ; Diaz, S.FZJ* ; Morrison, A.FZJ*
Staged deployment of interactive multi-application HPC workflows
2019The 2019 International Conference on High Performance Computing & Simulation, DublinDublin, Ireland, 15 Jul 2019 - 19 Jul 20192019-07-152019-07-19 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Software Jordan, J.FZJ* ; Mørk, H. ; Vennemo, S. B. ; Terhorst, D.FZJ* ; Peyser, A.FZJ* ; Ippen, T. ; Deepu, R.FZJ* ; Eppler, J. M.FZJ* ; van Meegen, A.FZJ* ; Kunkel, S. ; Sinha, A. ; Fardet, T. ; Diaz, S.FZJ* ; Morrison, A.FZJ* ; Schenck, W. ; Dahmen, D.FZJ* ; Pronold, J.FZJ* ; Stapmanns, J.FZJ* ; Trensch, G.FZJ* ; Spreizer, S.FZJ* ; Mitchell, J.FZJ* ; Graber, S.FZJ* ; Senk, J.FZJ* ; Linssen, C.FZJ* ; Hahne, J. ; Serenko, A. ; Naoumenko, D. ; Thomson, E. ; Kitayama, I.FZJ* ; Berns, S. ; Plesser, H. E. (Corresponding author)FZJ*
NEST 2.18.0
Fulltext BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Other) Linssen, C. (Corresponding author)FZJ* ; Eppler, J. M.FZJ*
NESTML Tutorial
2019NEST Conference 2019: A Forum for Users and Developers, AasAas, Norway, 24 Jun 2019 - 25 Jun 20192019-06-242019-06-25 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Linssen, C. (Corresponding author)FZJ* ; Eppler, J. M.FZJ* ; Morrison, A.FZJ*
NESTML: An extensible modeling language for biologically plausible neural networks
2019NEST Conference 2019: A Forum for Users and Developers, AasAas, Norway, 24 Jun 2019 - 25 Jun 20192019-06-242019-06-25 BibTeX | EndNote: XML, Text | RIS

Preprint Senk, J. (Corresponding author)FZJ* ; Korvasová, K.FZJ* ; Schuecker, J. ; Hagen, E. ; Tetzlaff, T.FZJ* ; Diesmann, M.FZJ* ; Helias, M.FZJ*
Conditions for wave trains in spiking neural networks
Files Fulltext Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Sprenger, J. (Corresponding author)FZJ*RWTH* ; Zehl, L.FZJ*RWTH* ; Pick, J.FZJ* ; Sonntag, M. ; Grewe, J. ; Wachtler, T.Extern* ; Grün, S.FZJ*RWTH* ; Denker, M.FZJ*RWTH*
odMLtables: A User-Friendly Approach for Managing Metadata of Neurophysiological Experiments
Frontiers in neuroinformatics 13, 62 (2019) [10.3389/fninf.2019.00062]2019 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (Other) Manos, T. (Corresponding author)FZJ* ; Diaz, S.FZJ* ; Hoffstaedter, F.FZJ* ; Schreiber, J.FZJ* ; Eickhoff, S.FZJ* ; Popovych, O.FZJ*
Impact of brain parcellation on parameter optimization of the whole-brain dynamical models
2019Organization for Human Brain Mapping 2019, OHBM 2019, RomeRome, Italy, 9 Jun 2019 - 13 Jun 20192019-06-092019-06-13 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Peyser, A. (Corresponding author)FZJ* ; Diaz, S.FZJ* ; Klijn, W.FZJ* ; Morrison, A.FZJ* ; Triesch, J.
Editorial: Linking experimental and computational connectomics
Network neuroscience 3(4), 902-904 (2019) [10.1162/netn_e_00108]2019 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Preprint Bachmann, C. (Corresponding author)FZJ* ; Tetzlaff, T.FZJ* ; Duarte, R.FZJ* ; Morrison, A.FZJ*
Firing rate homeostasis counteracts changes in stability of recurrent neural networks caused by synapse loss in Alzheimer's disease
{1909.01012 [q-bio.NC] (2019)2019 Files Fulltext Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Other) Menzel, M. (Corresponding author)FZJ* ; Axer, M.FZJ* ; Amunts, K.FZJ* ; De Raedt, H.FZJ* ; Michielsen, K.FZJ*
Transmittance and Diattenuation of Brain Tissue Explained by Finite-Difference Time-Domain Simulations
20193rd HBP Student Conference, Ghent UniversityGhent University, Belgium, 6 Feb 2019 - 7 Feb 20192019-02-062019-02-07 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (After Call) Kühn, T. (Corresponding author)FZJ* ; Stapmanns, J.FZJ* ; Dahmen, D.FZJ* ; Honerkamp, C. ; Helias, M.FZJ*
Functional Renormalization Group for Stochastic Rate Neurons
2019DPG Spring Meeting, Section Condensed Matter, RegensburgRegensburg, Germany, 31 Mar 2019 - 5 Apr 20192019-03-312019-04-05 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Tahmasian, M. (Corresponding author) ; Sepehry, A. A. ; Samea, F. ; Khodadadifar, T. ; Soltaninejad, Z. ; Javaheripour, N. ; Khazaie, H. ; Zarei, M. ; Eickhoff, S. B.FZJ* ; Eickhoff, C. R.FZJ*
Practical recommendations to conduct a neuroimaging meta‐analysis for neuropsychiatric disorders
Human brain mapping 40(17), 5142-5154 (2019) [10.1002/hbm.24746]2019 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) Linssen, C. (Corresponding author)FZJ* ; Eppler, J. M.FZJ* ; Morrison, A.FZJ*
NESTML: A domain-specific language for biologically realistic neuron and synapse models
2019The Computational Modeling in Biology Network 2019, COMBINE 2019, HeidelbergHeidelberg, Germany, 15 Jul 2019 - 19 Jul 20192019-07-152019-07-19 BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) Kühn, T. (Corresponding author)FZJ*
(Mean-)Field Theory Methods in Neuroscience
2019Seminar, ENS, ParisENS, Paris, France, 20 Jun 20192019-06-20 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) Duarte, R. (Corresponding author)FZJ*
State-dependent sequence processing in Spiking Neural Networks
2019NII Shonan Meeting: "Language as goal-directed sequential behavior", KanagawaKanagawa, Japan, 19 May 2019 - 23 May 20192019-05-192019-05-23 BibTeX | EndNote: XML, Text | RIS

Lecture (Other) Keup, C. (Corresponding author)FZJ*
The Balanced State in Random Networks
2019Lecture at EITN Spring School 2019 (Paris, France), 12 Apr 2019 - 12 Apr 20192019-04-122019-04-12 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Jordan, J. (Corresponding author)FZJ* ; Weidel, P.FZJ* ; Morrison, A.FZJ*
A closed-loop toolchain for neural network simulations of learning autonomous agents
Frontiers in computational neuroscience 13, 46 (2019) [10.3389/fncom.2019.00046]2019 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Sukiban, J. ; Voges, N. (Corresponding author)FZJ* ; Dembek, T. A. ; Pauli, R.FZJ* ; Visser-Vandewalle, V. ; Denker, M.FZJ* ; Weber, I. ; Timmermann, L. ; Grün, S.FZJ*
Evaluation of Spike Sorting Algorithms: Application to Human Subthalamic Nucleus Recordings and Simulations
Neuroscience 414, 168-185 (2019) [10.1016/j.neuroscience.2019.07.005]2019 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Contribution to a conference proceedings/Contribution to a book Dickscheid, T. (Corresponding author)FZJ* ; Haas, S.FZJ* ; Bludau, S.FZJ* ; Glock, P.FZJ* ; Huysegoms, M.FZJ* ; Amunts, K.FZJ*
Towards 3D reconstruction of neuronal cell distributions from histological human brain sections
2019HPCC proceedings
Braincomp 2019, CetraroCetraro, Italy, 15 Jul 2019 - 19 Jul 20192019-07-152019-07-19 IOS press 1-17 (2019)2019 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) Korcsak-Gorzo, A. (Corresponding author)FZJ* ; van Meegen, A. (Corresponding author)FZJ*
L2L in Data-Based Models of Visual Cortex
2019HBP L2L (learning to learn) workshop, FuerbergFuerberg, Austria, 2 Jun 2019 - 5 Jun 20192019-06-022019-06-05 BibTeX | EndNote: XML, Text | RIS

Journal Article Duarte, R. (Corresponding author)FZJ* ; Morrison, A.FZJ*
Leveraging heterogeneity for neural computation with fading memory in layer 2/3 cortical microcircuits
PLoS Computational Biology 15(4), e1006781 - (2019) [10.1371/journal.pcbi.1006781]2019 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Worringer, B. (Corresponding author) ; Langner, R. (Corresponding author)FZJ* ; Koch, I. ; Eickhoff, S.FZJ* ; Eickhoff, C.FZJ* ; Binkofski, F. C.FZJ*
Common and distinct neural correlates of dual-tasking and task-switching: a meta-analytic review and a neuro-cognitive processing model of human multitasking
Brain structure & function 224(5), 1845–1869 (2019) [10.1007/s00429-019-01870-4]2019 Embargoed OpenAccess Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Poeppl, T. B. (Corresponding author) ; Langguth, B. ; Laird, A. R. ; Eickhoff, S.FZJ*
Meta-analytic Evidence for Neural Dysactivity Underlying Sexual Dysfunction
The journal of sexual medicine 16(5), 614–617 (2019) [10.1016/j.jsxm.2019.02.012]2019 Embargoed OpenAccess Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Javaheripour, N. ; Shahdipour, N. ; Noori, K. ; Zarei, M. ; Camilleri, J.FZJ* ; Laird, A. R. ; Fox, P. ; Eickhoff, S.FZJ* ; Eickhoff, C.FZJ* ; Rosenzweig, I. ; Khazaie, H. (Corresponding author) ; Tahmasian, M.
Functional brain alterations in acute sleep deprivation: An activation likelihoodestimation meta-analysis
Sleep medicine reviews 46, 64-73 (2019) [10.1016/j.smrv.2019.03.008]2019 Files BibTeX | EndNote: XML, Text | RIS

Journal Article Kharabian, S. (Corresponding author)FZJ* ; Eickhoff, S.FZJ* ; Hoffstaedter, F.FZJ* ; GENON, S. (Corresponding author)FZJ*
Empirical examination of the replicability of associations between brain structure and psychological variables
eLife 8, e43464 (2019) [10.7554/eLife.43464]2019 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Contribution to a conference proceedings Muzzarelli, L. (Corresponding author)FZJ* ; Weis, S.FZJ* ; Eickhoff, S.FZJ* ; Patil, K.FZJ*
Rank Selection in Non-negative Matrix Factorization: systematic comparison and a new MAD metric
20192019 International Joint Conference on Neural Networks, BudapestBudapest, Hungary, 14 Jul 2019 - 19 Jul 20192019-07-142019-07-19 7 pp. (2019)2019 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Gu, R. ; Huang, W. ; Camilleri, J.FZJ* ; Xu, P. ; Wei, P. ; Eickhoff, S.FZJ* ; Feng, C. (Corresponding author)
Love is analogous to money in human brain: Coordinate-based and functional connectivity meta-analyses of social and monetary reward anticipation
Neuroscience & biobehavioral reviews 100, 108 - 128 (2019) [10.1016/j.neubiorev.2019.02.017]2019 Embargoed OpenAccess Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Software Akar, N. A. ; Biddiscombe, J. ; Cumming, B. (Corresponding author) ; Huber, F. ; Kabic, M. ; Karakasis, V. ; Klijn, W.FZJ* ; Küsters, A.FZJ* ; Peyser, A. (Corresponding author)FZJ* ; Yates, S.
arbor-sim/arbor: Arbor Library v0.2
Fulltext BibTeX | EndNote: XML, Text | RIS

Journal Article Samea, F. ; Soluki, S. ; Nejati, V. ; Zarei, M. ; Cortese, S. ; Eickhoff, S.FZJ* ; Tahmasian, M. (Corresponding author) ; Eickhoff, C.FZJ*
Brain alterations in children/adolescents with ADHD revisited: a neuroimaging meta-analysis of 96 structural and functional studies
Neuroscience & biobehavioral reviews 100, 1-8 (2019) [10.1016/j.neubiorev.2019.02.011]2019 Embargoed OpenAccess Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Plachti, A. (Corresponding author)FZJ* ; Eickhoff, S.FZJ* ; Hoffstaedter, F.FZJ* ; Patil, K.FZJ* ; Laird, A. R. ; Fox, P. T. ; Amunts, K.FZJ* ; Genon, S.FZJ*
Multimodal Parcellations and Extensive Behavioral Profiling Tackling the Hippocampus Gradient
Cerebral cortex 29(11), 4595-4612 (2019) [10.1093/cercor/bhy336]2019 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Menzel, M. (Corresponding author)FZJ* ; Axer, M.FZJ* ; Amunts, K.FZJ* ; De Raedt, H.FZJ* ; Michielsen, K.FZJ*
Diattenuation Imaging reveals different brain tissue properties
Scientific reports 9(1), 1939 (2019) [10.1038/s41598-019-38506-w]2019 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Hensel, L.FZJ* ; Hoffstaedter, F.FZJ* ; Caspers, J.FZJ* ; Michely, J. ; Mathys, C. ; Heller, J.FZJ* ; Eickhoff, C.FZJ* ; Reetz, K.FZJ* ; Südmeyer, M. ; Fink, G. R.FZJ* ; Schnitzler, A. ; Grefkes, C.FZJ* ; Eickhoff, S. (Corresponding author)FZJ*
Functional Connectivity Changes of Key Regions for Motor Initiation in Parkinson’s Disease
Cerebral cortex 29, 383-396 (2019) [10.1093/cercor/bhy259]2019 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Langner, R. (Corresponding author)FZJ* ; Eickhoff, S.FZJ* ; Bilalić, M.
A network view on brain regions involved in experts’ object and pattern recognition: Implications for the neural mechanisms of skilled visual perception
Brain and cognition 131, 74-86 (2019) [10.1016/j.bandc.2018.09.007]2019 Embargoed OpenAccess Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Wong, T. Y. (Corresponding author) ; Sid, A. ; Wensing, T. ; Eickhoff, S.FZJ* ; Habel, U.FZJ* ; Gur, R. C. ; Nickl-Jockschat, T.
Neural networks of aggression: ALE meta-analyses on trait and elicited aggression
Brain structure & function 224(1), 133-148 (2019) [10.1007/s00429-018-1765-3]2019 Embargoed OpenAccess Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Yakoubi, R.FZJ* ; Rollenhagen, A.FZJ* ; von Lehe, M. ; Shao, Y.FZJ* ; Sätzler, K. ; Lübke, J. (Corresponding author)FZJ*
Quantitative Three-Dimensional Reconstructions of Excitatory Synaptic Boutons in Layer 5 of the Adult Human Temporal Lobe Neocortex: A Fine-Scale Electron Microscopic Analysis
Cerebral cortex 29(7), 2797–2814 (2019) [10.1093/cercor/bhy146]2019 Files BibTeX | EndNote: XML, Text | RIS

Journal Article Bahuguna, J. (Corresponding author)FZJ* ; Weidel, P.FZJ* ; Morrison, A.FZJ*
Exploring the role of striatal D1 and D2 medium spiny neurons in action selection using a virtual robotic framework
European journal of neuroscience 49(6), 737-753 (2019) [10.1111/ejn.14021]2019 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Richter, M. ; Amunts, K.FZJ* ; Mohlberg, H.FZJ* ; Bludau, S.FZJ* ; Eickhoff, S.FZJ* ; Zilles, K.FZJ* ; Caspers, S. (Corresponding author)FZJ*
Cytoarchitectonic segregation of human posterior intraparietal and adjacent parieto-occipital sulcus and its relation to visuomotor and cognitive functions
Cerebral cortex 29(3), 1305–1327 (2019) [10.1093/cercor/bhy245]2019 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Quaglio, P. (Corresponding author) ; Rostami, V. ; Torre, E. ; Grün, S.FZJ*
Methods for identification of spike patterns in massively parallel spike trains
Biological cybernetics 112(1-2), 57 - 80 (2018) [10.1007/s00422-018-0755-0]2018 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Preprint Stapmanns, J. (Corresponding author)FZJ* ; Kühn, T. (Corresponding author)FZJ* ; Dahmen, D.FZJ* ; Luu, T.FZJ* ; Honerkamp, C. (Last author) ; Helias, M. (Last author)FZJ*
Self-consistent formulations for stochastic nonlinear neuronal dynamics
Files Fulltext by OpenAccess repository Fulltext by arXiv.org BibTeX | EndNote: XML, Text | RIS

Preprint Menzel, M. (Corresponding author)FZJ* ; Axer, M.FZJ* ; Amunts, K.FZJ* ; De Raedt, H. ; Michielsen, K.FZJ*
Diattenuation Imaging reveals different brain tissue properties
(2019)2019 Files Fulltext Fulltext by arXiv.org Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Preprint Menzel, M. (Corresponding author)FZJ* ; Axer, M.FZJ* ; De Raedt, H. ; Costantini, I. ; Silvestri, L. ; Pavone, F. S. ; Amunts, K.FZJ* ; Michielsen, K.FZJ*
Finite-Difference Time-Domain simulations of transmission microscopy enable a better interpretation of 3D nerve fiber architectures in the brain
(2018)2018 Files Fulltext Fulltext by OpenAccess repository Fulltext by arXiv.org BibTeX | EndNote: XML, Text | RIS

Journal Article Senk, J. (Corresponding author)FZJ* ; Carde, C. ; Hagen, E. ; Kuhlen, T. W. ; Diesmann, M.FZJ* ; Weyers, B.
VIOLA—A Multi-Purpose and Web-Based Visualization Tool for Neuronal-Network Simulation Output
Frontiers in neuroinformatics 12, 75 (2018) [10.3389/fninf.2018.00075]2018 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Other) Diaz, S. (Corresponding author)FZJ*
Networking for young researchers in the HBP
2018Human Brain Project Summit 2018, MaastrichtMaastricht, Netherlands, 16 Oct 2018 - 18 Oct 20182018-10-162018-10-18 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Other) Diaz, S. (Corresponding author)FZJ* ; Peyser, A.FZJ* ; Klijn, W.FZJ*
Hyperparameter optimization for networks with structural plasticity using L2L
2018Human Brain Project Summit 2018, MaastrichtMaastricht, Netherlands, 16 Oct 2018 - 18 Oct 20182018-10-162018-10-18 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Acar, F. (Corresponding author) ; Seurinck, R. ; Eickhoff, S.FZJ* ; Moerkerke, B.
Assessing robustness against potential publication bias in Activation Likelihood Estimation (ALE) meta-analyses for fMRI
PLOS ONE 13(11), - (2018) [10.1371/journal.pone.0208177]2018 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) Quaglio, P. (Corresponding author)FZJ*
ANALYSIS OF SPATIO-TEMPORAL PATTERNS IN EXPERIMENTAL SPIKE TRAINS WITH SPADE
201813th V4A meeting, FranceFrance, BibTeX | EndNote: XML, Text | RIS

Lecture (Other) Diaz, S. (Corresponding author)FZJ* ; Deepu, R.FZJ* ; Peyser, A.FZJ* ; Klijn, W.FZJ*
Training course "Porting code from Matlab to Python"
2018Lecture at (Jülich, Germany), 8 Oct 2018 - 9 Oct 20182018-10-082018-10-09 Files Fulltext Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Lecture (Other) Trensch, G. (Corresponding author)FZJ* ; Klijn, W.FZJ*
Training course "Software Development in Science"
2018Lecture at Jülich Supercomputing Centre (Jülich, Germany), 19 Nov 2018 - 20 Nov 20182018-11-192018-11-20 BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Invited) Peyser, A. (Corresponding author)FZJ*
Computational Ecosystem in Neuroscience: High Performance Analytics and Computing for the HBP
2018High Performance Computing (HPC) Resources for Parallel Simulations and Data Analysis: NSG and HPAC, satellite symposium at Society for Neuroscience Meeting 2018, San DiegoSan Diego, USA, 3 Nov 2018 - 3 Nov 20182018-11-032018-11-03 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference / Event Majumdar, A. ; Sivagnanam, S. ; Yoshimoto, K. ; Carnevale, T. (Corresponding author) ; Peyser, A. (Corresponding author)FZJ*
High Performance Computing (HPC) Resources for Parallel Simulations and Data Analysis: NSG and HPAC
2018Society for Neuroscience Meeting 2018, San DiegoSan Diego, USA, 3 Nov 2018 - 3 Nov 20182018-11-032018-11-03 BibTeX | EndNote: XML, Text | RIS

Poster (Other) Ritter, P. (Corresponding author) ; Peyser, A. (Collaboration author)FZJ* ; Diaz, S. (Collaboration author)FZJ*
Co-Design Project 8 The Virtual Brain (TVB): Interfacing The Virtual Brain with HBP Platforms
2018Human Brain Project Summit, MaastrichtMaastricht, Netherlands, 16 Oct 2018 - 18 Oct 20182018-10-162018-10-18 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (Other) Wang, H. E. ; Woodman, M. M. ; Hashemi, M. ; Peyser, A.FZJ* ; Diaz, S.FZJ* ; Kusch, L. ; Jirsa, V. K. (Corresponding author)
The Virtual Epileptic Patient Workflow
2018Human Brain Project Summit, MaastrichtMaastricht, Netherlands, 16 Oct 2018 - 18 Oct 20182018-10-162018-10-18 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (Other) Peyser, A. (Corresponding author)FZJ* ; Diaz, S.FZJ* ; Klijn, W.FZJ*
"Learning-2-Learn" on HPC
2018Human Brain Project Summit, MaastrichtMaastricht, Netherlands, 16 Oct 2018 - 18 Oct 20182018-10-162018-10-18 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (Other) Cumming, B. (Corresponding author) ; Yates, S. ; Abi Akar, N. ; Küsters, A.FZJ* ; Klijn, W.FZJ* ; Peyser, A. (Corresponding author)FZJ*
Arbor: A morphologically detailed neural network simulation library for modern high performance computer architectures
2018Human Brain Project Summit, MaastrichtMaastricht, Netherlands, 15 Oct 2018 - 18 Oct 20182018-10-152018-10-18 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Blundell, I.FZJ* ; Brette, R. ; Cleland, T. A. ; Close, T. G. ; Coca, D. ; Davison, A. P. ; Diaz, S.FZJ* ; Fernandez Musoles, C. ; Gleeson, P. ; Goodman, D. F. M. ; Hines, M. ; Hopkins, M. W. ; Kumbhar, P. ; Lester, D. R. ; Marin, B. ; Morrison, A.FZJ* ; Müller, E. ; Nowotny, T. ; Peyser, A.FZJ* ; Plotnikov, D.FZJ* ; Richmond, P. ; Rowley, A. ; Rumpe, B. ; Stimberg, M. ; Stokes, A. B. ; Tomkins, A. ; Trensch, G.FZJ* ; Woodman, M. ; Eppler, J. M. (Corresponding author)FZJ*
Code Generation in Computational Neuroscience: A Review of Tools and Techniques
Frontiers in neuroinformatics 12, 68 (2018) [10.3389/fninf.2018.00068]2018 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Hardwick, R. M. (Corresponding author) ; Caspers, S.FZJ* ; Eickhoff, S.FZJ* ; Swinnen, S. P.
Neural correlates of action: Comparing meta-analyses of imagery, observation, and execution
Neuroscience & biobehavioral reviews 94, 31 - 44 (2018) [10.1016/j.neubiorev.2018.08.003]2018 Files BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Yegenoglu, A. (Corresponding author)FZJ* ; Gutzen, R.FZJ* ; Denker, M.FZJ* ; Grün, S.FZJ*
Utilizing the Elephant and NetworkUnit frameworks within the Collaboratory for an HPC-enabled workflow
2018Human Brain Project Summit 2018, MaastrichtMaastricht, Netherlands, 15 Oct 2018 - 18 Oct 20182018-10-152018-10-18 BibTeX | EndNote: XML, Text | RIS

Journal Article Schuecker, J. (Corresponding author)FZJ* ; Goedeke, S.FZJ* ; Helias, M.FZJ*
Optimal Sequence Memory in Driven Random Networks
Physical review / X 8(4), 041029 (2018) [10.1103/PhysRevX.8.041029]2018 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Software Akar, N. A. ; Biddiscombe, J. ; Cumming, B. (Corresponding author) ; Kabic, M. ; Karakasis, V. ; Klijn, W.FZJ* ; Küsters, A.FZJ* ; Martinez, I. ; Peyser, A. (Corresponding author)FZJ* ; Yates, S.
arbor-sim/arbor: Version 0.1: First release
Fulltext BibTeX | EndNote: XML, Text | RIS

Talk (non-conference) (Invited) Dahmen, D. (Corresponding author)FZJ*
Neural Networks and Reservoir Computing
2018Seminar, OetzOetz, Austria, 4 Jun 2018 - 8 Jun 20182018-06-042018-06-08 BibTeX | EndNote: XML, Text | RIS

Poster (Other) Stapmanns, J. (Corresponding author)FZJ*RWTH* ; Kühn, T.FZJ* ; Dahmen, D.FZJ* ; Honerkamp, C. (Last author)RWTH* ; Helias, M. (Last author)FZJ*
Field Theory for Nonlinear Stochastic Rate Neurons
2018Bernstein Conference 2018, BerlinBerlin, Germany, 25 Sep 2018 - 28 Sep 20182018-09-252018-09-28 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (Panel discussion) Sprenger, J. (Corresponding author)FZJ* ; Yegenoglu, A.FZJ* ; Denker, M.FZJ* ; Grün, S.FZJ*
Reproducible data analysis of activity data using open-source software toolsNeo & Elephant
2018Bernstein Conference 2018, BCCN 2018, BerlinBerlin, Germany, 25 Sep 2018 - 29 Sep 20182018-09-252018-09-29 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) von Papen, M. (Corresponding author)FZJ* ; Voges, N.FZJ* ; Dabrowska, P.FZJ* ; Senk, J.FZJ* ; Hagen, E. ; Diesmann, M.FZJ* ; Dahmen, D.FZJ* ; Helias, M.FZJ* ; Brochier, T. ; Riehle, A.FZJ* ; Grün, S.FZJ*
Quantitative comparison of a mesocircuit model with resting state activity in the macaque motor cortex
2018Bernstein Conference 2018, BerlinBerlin, Germany, 26 Sep 2018 - 28 Sep 20182018-09-262018-09-28 BibTeX | EndNote: XML, Text | RIS

Abstract Senk, J. (Corresponding author)FZJ* ; Hagen, E. ; van Albada, S.FZJ* ; Diesmann, M.FZJ*
A mesoscopic layered cortical network model for spiking activity and local field potentials
2018Bernstein Conference 2018, BerlinBerlin, Germany, 26 Sep 2018 - 28 Sep 20182018-09-262018-09-28 Fulltext BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Senk, J. (Corresponding author)FZJ* ; Hagen, E. ; van Albada, S.FZJ* ; Diesmann, M.FZJ*
A mesoscopic layered cortical network model for spiking activity and local field potentials
2018Bernstein Conference 2018, BerlinBerlin, Germany, 26 Sep 2018 - 28 Sep 20182018-09-262018-09-28 Fulltext BibTeX | EndNote: XML, Text | RIS

Abstract Dahmen, D. (Corresponding author)FZJ* ; Grün, S.FZJ* ; Diesmann, M.FZJ* ; Helias, M.FZJ*
A second type of criticality in the brain uncovers rich multiple-neuron dynamics
2018Bernstein Conference, BerlinBerlin, Germany, 25 Sep 2018 - 28 Sep 20182018-09-252018-09-28 BibTeX | EndNote: XML, Text | RIS

Poster (After Call) Dahmen, D. (Corresponding author)FZJ* ; Grün, S.FZJ* ; Diesmann, M.FZJ* ; Helias, M.FZJ*
A second type of criticality in the brain uncovers rich multiple-neuron dynamics
2018Bernstein Conference, RWTH AachenBerlin, RWTH Aachen, Germany, 25 Sep 2018 - 28 Sep 20182018-09-252018-09-28 BibTeX | EndNote: XML, Text | RIS

Contribution to a conference proceedings Jordan, J. (Corresponding author)FZJ* ; Dold, D. ; Petrovici, M. A. ; Bytschok, I. ; Breitwieser, O. ; Kungl, A. F. ; Baumbach, A. ; Schemmel, J. ; Meier, K. ; Diesmann, M.FZJ* ; Tetzlaff, T.FZJ*
There is no noise: Bayesian computation with networks of deterministic neurons
2018Bernstein Conference 2018, BerlinBerlin, Germany, 25 Sep 2018 - 28 Sep 20182018-09-252018-09-28 W 38 (2018) [10.12751/nncn.bc2018.0056]2018 BibTeX | EndNote: XML, Text | RIS

Poster (Other) Mochalski, L. (Corresponding author)FZJ* ; Camilleri, J.FZJ* ; Eickhoff, S.FZJ*
Structural correlates of visuospatial and verbal working memory
2018Synapsium, NijmegenNijmegen, The Netherlands, 9 Jun 2018 - 9 Jun 20182018-06-092018-06-09 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Poster (Other) Mochalski, L. (Corresponding author)FZJ* ; Camilleri, J.FZJ* ; Eickhoff, S.FZJ*
Structural correlates of visuospatial and verbal working memory
20186th North Sea Laterality, DundeeDundee, Great Britain, 22 Aug 2018 - 24 Aug 20182018-08-222018-08-24 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Conference Presentation (After Call) Quaglio, P. (Corresponding author)FZJ*

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