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  • Schwarten M, Weiergräber OH, Petrović D, Strodel B, Willbold D 
    Structural Studies of Autophagy-Related Proteins 
    Methods Mol Biol. 1880, 17-56 (2019) 
    https://link.springer.com/protocol/10.1007%2F978-1-4939-8873-0_2  
  • Uluca B, Viennet T, Petrovic D, Shaykhalishahi H, Weirich F, Gönülalan A, Strodel B, Etzkorn M, Hoyer W, Heise H 
    DNP-Enhanced MAS NMR: A Tool to Snapshot Conformational Ensembles of α-Synuclein in Different States 
    Biophys. J. 114, 1614-1623 (2018) 
    https://doi.org/10.1016/j.bpj.2018.02.011  
  • Viennet T, Wördehoff MW, Uluca B, Poojari C, Shaykhalishahi H, Willbold D, Strodel B, Heise H, Buell AK, Hoyer W, Etzkorn M: 
    Structural insights from lipid-bilayer nanodiscs link α-Synuclein membrane-binding modes to amyloid fibril formation 
    Commun. Biol. 1, 44 (2018) 
    https://doi.org/10.1038/s42003-018-0049-z  
  • Weiergräber OH, Schwarten M, Strodel B, Willbold D.  
    Investigating Structure and Dynamics of Atg8 Family Proteins. 
    Methods Enzymol. 587, 115-142 (2017) 
  • Wolff M, Zhang-Haagen B, Decker C, Barz B, Schneider M, Biehl R, Radulescu A, Strodel B, Willbold D, Nagel-Steger L 
    Aβ42 pentamers/hexamers are the smallest detectable oligomers in solution 
    Sci Rep 7, 2493 (2017) 
    http://dx.doi.org/10.1038/s41598-017-02370-3  
  • Barz B and Strodel B 
    Understanding Amyloid-β oligomerization at the molecular level: the role of the fibril surface. 
    Chem. Eur. J. 22, 8768-8772 (2016) 
  • Carballo-Pacheco M and Strodel B 
    Advances in the Simulation of Protein Aggregation at the Atomistic Scale 
    J. Phys. Chem. B 120, 2991–2999 (2016) 
  • Kovacic F, Mandrysch A, Poojari C, Strodel B, Jaeger KE 
    Structural features determining thermal adaptation of esterases 
    Protein Eng. Des. Sel. 29, 65-76 (2016) 
  • Kynast P, Derreumaux P and Strodel B 
    Evaluation of the coarse-grained OPEP force field for protein-protein docking 
    BMC Biophysics 9, 4 (2016) 
  • Nagel-Steger L, Owen MC, and Strodel B 
    An account of amyloid oligomers: facts and figures obtained from experiments and simulations 
    ChemBioChem 17, 657-676 (2016) 
    http://dx.doi.org/10.1002/cbic.201500623  
  • Owen MC, Strodel B, Csizmadia IG & Viskolcz B 
    Radical Formation Initiates Solvent-Dependent Unfolding and β-Sheet Formation in a Model Helical Peptide 
    J. Phys. Chem. B 120, 4878-4889 (2016) 
  • Wallin C, Kulkarni YS, Abelein A, Jarvet J, Liao Q, Strodel B, Olsson L, Luo J, Abrahams JP, Sholts SB, Roos PM, Kamerlin SCL, Gräslund A, Wärmländer SKTS 
    Characterization of Mn(II) ion Binding to the Amyloid-β Peptide in Alzheimer’s Disease 
    J Trace Elem Med Biol , (2016) 
    http://www.sciencedirect.com/science/article/pii/S0946672X1630030X  
  • Ma P, Schillinger O, Schwarten M, Lecher J, Hartmann R, Stoldt M, Mohrlüder J, Olubiyi O, Strodel B, Willbold D, Weiergräber OH 
    Conformational polymorphism in the autophagy-related protein GATE-16 
    Biochemistry 54, 5469-5479 (2015) 
  • Olubiyi OO, Frenzel D, Bartnik D, Glück JM, Brener O, Nagel-Steger L, Funke SA, Willbold D, Strodel B 
    Amyloid aggregation inhibitory mechanism of arginine-rich D-peptides 
    Curr. Med. Chem. 21, 1448-1457 (2014) 
  • Ma P, Schwarten M, Schneider L, Boeske A, Henke N, Lisak D, Weber S, Mohrlüder J, Stoldt M, Strodel B, Methner A, Hoffmann S, Weiergräber OH, Willbold D 
    Interaction of Bcl-2 with the autophagy-related GABAA receptor-associated protein (GABARAP): Biophysical characterization and functional implications 
    J Biol Chem 288, 37204-37215 (2013) 
  • Bauer MS, Strodel B, Fejer SN, Koslover EF, Wales DJ 
    Interpolation Schemes for Peptide Rearrangements. 
    J. Chem. Phys. 132, (2010) 
  • Klenin K, Strodel B, Wales DJ, Wenzel W 
    Modelling Proteins: Conformational Sampling and Reconstruction of Folding Kinetics 
    BBA-Proteins and Proteomics, in press , (2010) 
  • Malolepsza E, Strodel B, Khalili M, Trygubenko S, Fejer S, Wales DJ 
    Symmetrisation of the AMBER and CHARMM Force Fields. 
    J. Comp. Chem., 31, 1402-1409 (2010) 
  • Strodel B, Lee JWL, Whittleston CS, Wales DJ 
    Transmembrane structures for Alzheimer's Aβ1-42 oligomers. 
    J. Am. Chem. Soc. , (2010) 
  • Wales DJ, Carr JM, Khalili M, de Souza V, Strodel B, Whittleston CS 
    Pathways and Rates for Structural Transformations of Peptides and Proteins. In Energy Flow in Proteins. 
    edited by D.Leitner and J.Straub, Taylor and Francis/CRC Press , 315-340 (2009) 
  • Strodel B, Fitzpatrick AW, Vendruscolo M, Dobson CM, Wales DJ 
    Characterising the first steps of amyloid formation for the ccβ peptide. 
    J. Phys. Chem. B 112, 9998-10004 (2008) 
  • Strodel B, Wales DJ 
    Implicit solvent models and the energy landscape for aggregation of the amyloidogenic KFFE peptide. 
    J. Chem. Theo. Comp. 4, 657-672 (2008) 
  • Strodel B, Wales DJ 
    Frontiers Article: Free Energy Surfaces from an Extended Harmonic Superposition Approach and Kinetics for Alanine Dipeptide. 
    Chem. Phys. Lett., 466, 105-115 (2008) 
  • Strodel B, Whittleston CS, Wales DJ 
    Thermodynamics and Kinetics of Aggregation for the GNNQQNY Peptide 
    J. Am. Chem. Soc. 129, 16005-16014 (2007) 
  • Strodel B, Stock G 
    Quantum modeling of transient infrared spectra reflecting photoinduced electron-transfer dynamics. 
    J. Chem. Phys. 124, (2006) 
  • Uspenskiy I, Strodel B, Stock G 
    Classical description of the dynamics and time-resolved spectroscopy of nonadiabatic cis-trans photoisomerizations. 
    Chem. Phys. 329:, 109-117 (2006) 
  • Uspenskiy I, Strodel B, Stock G 
    Classical calculation of transient absorption spectra monitoring ultrafast electron transfer processes. 
    J. Chem. Theo. Comp. 2, 1605-1617 (2006) 

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