Publications 2019
Journal Article
Autophagy-Related Proteins GABARAP and LC3B Label Structures of Similar Size but Different Shape in Super-Resolution Imaging
Molecules 24(9), 1833 - (2019) [10.3390/molecules24091833]
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Journal Article
An engineered monomer binding-protein for α-synuclein efficiently inhibits the proliferation of amyloid fibrils
eLife 8, e46112 (2019) [10.7554/eLife.46112]
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Journal Article
Molecular adaptations of NADP-malic enzyme for its function in C4 photosynthesis in grasses
Nature plants 5(7), 755 - 765 (2019) [10.1038/s41477-019-0451-7]
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Journal Article
Large-scale, dynamin-like motions of the human guanylate binding protein 1 revealed by multi-resolution simulations
PLoS Computational Biology 15(10), e1007193 - (2019) [10.1371/journal.pcbi.1007193]
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Journal Article
C-terminal Modulators of Heat Shock Protein of 90 kDa (HSP90): State of Development and Modes of Action
Bioorganic & medicinal chemistry 27(21), 115080 (2019) [10.1016/j.bmc.2019.115080]
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Journal Article
Pseudomonas aeruginosa esterase PA2949, a bacterial homolog of the human membrane esterase ABHD6: expression, purification and crystallization
Acta crystallographica / F Structural biology communications Section F F75(4), 270 - 277 (2019) [10.1107/S2053230X19002152]
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Journal Article
Posttranslational modification of the NADP-malic enzyme involved in C4 photosynthesis fine-tunes the enzymatic activity during the day
The plant cell 31(10), 2525-2539 (2019) [10.1105/tpc.19.00406]
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Journal Article
Automated and Optimally FRET-Assisted Structural Modeling
Biophysical journal 116(3, Suppl 1) 333a - (2019) [10.1016/j.bpj.2018.11.1815]
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Journal Article
Converging a Knowledge-Based Scoring Function: DrugScore2018
Journal of chemical information and modeling 59(1), 509–521 (2019) [10.1021/acs.jcim.8b00582]
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Journal Article
Nutrient exchange in arbuscular mycorrhizal symbiosis from a thermodynamic point of view
The new phytologist 222(2), 1043-1053 (2019) [10.1111/nph.15646]
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Journal Article
Metabolic resistance of the D-peptide RD2 developed for direct elimination of amyloid-β oligomers
Scientific reports 9(1), 5715 (2019) [10.1038/s41598-019-41993-6]
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Journal Article
α-Synuclein-derived lipoparticles in the study of α-Synuclein amyloid fibril formation
Chemistry and physics of lipids 220, 57 - 65 (2019) [10.1016/j.chemphyslip.2019.02.009]
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Journal Article
Unique structure and function of viral rhodopsins
Nature Communications 10(1), 4939 (2019) [10.1038/s41467-019-12718-0]
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Journal Article
Smad7 in intestinal CD4 + T cells determines autoimmunity in a spontaneous model of multiple sclerosis
Proceedings of the National Academy of Sciences of the United States of America 116(51), 25860 - 25869 (2019) [10.1073/pnas.1905955116]
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Journal Article
Partially inserted nascent chain unzips the lateral gate of the Sec translocon
EMBO reports 20, e48191 (2019) [10.15252/embr.201948191]
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Journal Article
Calcium-promoted interaction between the C2-domain protein EHB1 and metal transporter IRT1 inhibits Arabidopsis iron acquisition
Plant physiology 180(3), 1564-1581 (2019) [10.1104/pp.19.00163]
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Journal Article
Phosphorylated tyrosine 93 of hepatitis C virus nonstructural protein 5A is essential for interaction with host c-Src and efficient viral replication
The journal of biological chemistry 294, 7388-7402 (2019) [10.1074/jbc.RA119.007656]
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Journal Article
Isoform-specific Inhibition of N-methyl-D-aspartate Receptors by Bile Salts
Scientific reports 9(1), 10068 (2019) [10.1038/s41598-019-46496-y]
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Journal Article
Hyperpolarized MAS NMR of unfolded and misfolded proteins
Solid state nuclear magnetic resonance 98, 1-11 (2019) [10.1016/j.ssnmr.2018.12.003]
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Journal Article
Solution structure of the autophagy-related protein LC3C reveals a polyproline II motif on a mobile tether with phosphorylation site
Scientific reports 9(1), 14167 (2019) [10.1038/s41598-019-48155-8]
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Journal Article
Synthesis of peptoid-based class I selective histone deacetylase inhibitors with chemosensitizing properties
Journal of medicinal chemistry 62(24), 11260-11279 (2019) [10.1021/acs.jmedchem.9b01489]
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Journal Article
Structure of the SLy1 SAM homodimer reveals a new interface for SAM domain self-association
Scientific reports 9(1), 54 (2019) [10.1038/s41598-018-37185-3]
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Journal Article
Biochemical and structural characterization of murine GBP7, a guanylate binding protein with an elongated C-terminal tail
Biochemical journal 476(21), 3161 - 3182 (2019) [10.1042/BCJ20190364]
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Journal Article
N 6 -modified cAMP derivatives that activate protein kinase A also act as full agonists of murine HCN2 channels
The journal of biological chemistry 294, 17978-17987 (2019) [10.1074/jbc.RA119.010246]
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Journal Article
JAK2 p.G571S in B-cell precursor acute lymphoblastic leukemia: a synergizing germline susceptibility
Leukemia 33, 2331–2335 (2019) [10.1038/s41375-019-0459-z]
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Journal Article
Oral and intravenous transmission of α-synuclein fibrils to mice
Acta neuropathologica 138(4), 515 - 533 (2019) [10.1007/s00401-019-02037-5]
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Journal Article
Enantioselective total synthesis of altersolanol A and N
Bioorganic & medicinal chemistry 27(13), 2991 - 2997 (2019) [10.1016/j.bmc.2019.04.033]
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Journal Article
Integrated NMR, Fluorescence, and Molecular Dynamics Benchmark Study of Protein Mechanics and Hydrodynamics
The journal of physical chemistry <Washington, DC> / B B, Condensed matter, materials, surfaces, interfaces & biophysical 123(7), 1453 - 1480 (2019) [10.1021/acs.jpcb.8b08903]
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Journal Article
Co-culture of the fungus Fusarium tricinctum with Streptomyces lividans induces production of cryptic naphthoquinone dimers
RSC Advances 9(3), 1491 - 1500 (2019) [10.1039/C8RA09067J]
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Journal Article
A thermostable flavin-based fluorescent protein from Chloroflexus aggregans : a framework for ultra-high resolution structural studies
Photochemical & photobiological sciences 18(7), 1793 - 1805 (2019) [10.1039/C9PP00067D]
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Journal Article
GI infections are associated with an increased risk of Parkinson’s disease
Gut 69(6), (2019) [10.1136/gutjnl-2019-318822]
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Journal Article
Rational Drug Design of Peptide-Based Therapies for Sickle Cell Disease
Molecules 24(24), 4551 - (2019) [10.3390/molecules24244551]
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Journal Article
Novel Fluorescent Cyclic Nucleotide Derivatives to Study CNG and HCN Channel Function
Biophysical journal 116(12), 2411-2422 (2019) [10.1016/j.bpj.2019.05.006]
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Journal Article
A FRET-based biosensor for the quantification of glucose in culture supernatants of mL scale microbial cultivations
Microbial cell factories 18(1), 143 (2019) [10.1186/s12934-019-1193-y]
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Journal Article
Effects of in vivo conditions on amyloid aggregation
Chemical Society reviews 48(14), 3946 - 3996 (2019) [10.1039/C8CS00034D]
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Journal Article
Mechanism of Fibril and Soluble Oligomer Formation in Amyloid Beta and Hen Egg White Lysozyme Proteins
The journal of physical chemistry <Washington, DC> / B B, Condensed matter, materials, surfaces, interfaces & biophysical 123(27), 5678 - 5689 (2019) [10.1021/acs.jpcb.9b02338]
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Journal Article
Structural Insights into Curli CsgA Cross-β Fibril Architecture Inspire Repurposing of Anti-amyloid Compounds as Anti-biofilm Agents
PLoS pathogens 15(8), e1007978 - (2019) [10.1371/journal.ppat.1007978]
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Journal Article
Small-molecule inhibitors of nisin resistance protein NSR from the human pathogen Streptococcus agalactiae
Bioorganic & medicinal chemistry 27(20), 115079 (2019) [10.1016/j.bmc.2019.115079]
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Journal Article
Biallelic mutation of human SLC6A6 encoding the taurine transporter TAUT is linked to early retinal degeneration
The FASEB journal 33(10), 11507–11527 (2019) [10.1096/fj.201900914RR]
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Journal Article
Fluorescent analogs of peptoid-based HDAC inhibitors: Synthesis, biological activity and cellular uptake kinetics
Bioorganic & medicinal chemistry 27(19), 115039 - (2019) [10.1016/j.bmc.2019.07.055]
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Journal Article
Design, Synthesis and Biological Evaluation of β-Peptoid-Capped HDAC Inhibitors with Anti-Neuroblastoma and Anti-Glioblastoma Activity
MedChemComm 10(7), 1109-1115 (2019) [10.1039/C8MD00454D]
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Journal Article
Atomic structure of PI3-kinase SH3 amyloid fibrils by cryo-electron microscopy
Nature Communications 10(1), 3754 (2019) [10.1038/s41467-019-11320-8]
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Journal Article
Novel 3,4-Dihydroisocoumarins Inhibit Human P-gp and BCRP in Multidrug Resistant Tumors and Demonstrate Substrate Inhibition of Yeast Pdr5
Frontiers in pharmacology 10, 400 (2019) [10.3389/fphar.2019.00400]
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Journal Article
The Relevance of Conformational Entropy for Protein Ligand Interactions: the Case of Biotin and Streptavidin
Biophysical journal 116(3), 151a - (2019) [10.1016/j.bpj.2018.11.840]
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Journal Article
Aβ Oligomer Elimination Restores Cognition in Transgenic Alzheimer’s Mice with Full-blown Pathology
Molecular neurobiology 56(3), 2211-2223 (2019) [10.1007/s12035-018-1209-3]
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Journal Article
Deceleration of the neurodegenerative phenotype in pyroglutamate-Aβ accumulating transgenic mice by oral treatment with the Aβ oligomer eliminating compound RD2
Neurobiology of disease 124, 36-45 (2019) [10.1016/j.nbd.2018.10.021]
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Journal Article
Cosolvent-enhanced Sampling and Unbiased Identification of Cryptic Pockets Suitable for Structure-based Drug Design
Journal of chemical theory and computation 15(5), 3331–3343 (2019) [10.1021/acs.jctc.8b01295]
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Journal Article
PACKMOL-Memgen: A Simple-To-Use, Generalized Workflow for Membrane-Protein–Lipid-Bilayer System Building
Journal of chemical information and modeling 59(6), 2522-2528 (2019) [10.1021/acs.jcim.9b00269]
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Journal Article
Structural Model of the ETR1 Ethylene Receptor Transmembrane Sensor Domain
Scientific reports 9(1), 8869 (2019) [10.1038/s41598-019-45189-w]
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Contribution to a book
Structural Studies of Autophagy-Related Proteins
Autophagy / Ktistakis, Nicholas (Editor) Chapter 2 ; ISSN: 1064-3745=1940-6029 ; ISBN: 978-1-4939-8872-3=978-1-4939-8873-0 ; doi:10.1007/978-1-4939-8873-0
New York, NY : Springer New York, Methods in Molecular Biology 1880, 17 - 56 (2019) [10.1007/978-1-4939-8873-0_2]
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Journal Article
Automated Markov state models for molecular dynamics simulations of aggregation and self-assembly
The journal of chemical physics 150(11), 115101 - (2019) [10.1063/1.5083915]
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Journal Article
The highly GABARAP specific rat monoclonal antibody 8H5 visualizes GABARAP in immunofluorescence imaging at endogenous levels
Scientific reports 9(1), 526 (2019) [10.1038/s41598-018-36717-1]
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Journal Article
Author Correction: The highly GABARAP specific rat monoclonal antibody 8H5 visualizes GABARAP in immunofluorescence imaging at endogenous levels
Scientific reports 9(1), 19221 (2019) [10.1038/s41598-019-55814-3]
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Journal Article
Proton exchange in aqueous urea solutions measured by water‐exchange (WEX) NMR spectroscopy and chemical exchange saturation transfer (CEST) imaging in vitro
Magnetic resonance in medicine 82(3), 935-947 (2019) [10.1002/mrm.27778]
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Journal Article
Transition Metal Ion Interactions with Disordered Amyloid-β Peptides in the Pathogenesis of Alzheimer’s Disease: Insights from Computational Chemistry Studies
Journal of chemical information and modeling 59(5), 1782 - 1805 (2019) [10.1021/acs.jcim.8b00983]
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Journal Article
FK506 resistance of Saccharomyces cerevisiae Pdr5 and Candida albicans Cdr1 involves mutations in the transmembrane domains and extracellular loops
Antimicrobial agents and chemotherapy 63(1), e01146-18 (2019) [10.1128/AAC.01146-18]
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Journal Article
Evidence for bidirectional and trans-synaptic parasympathetic and sympathetic propagation of alpha-synuclein in rats
Acta neuropathologica 138(4), 535 - 550 (2019) [10.1007/s00401-019-02040-w]
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Journal Article
Reconstitution and NMR Characterization of the Ion-Channel Accessory Subunit Barttin in Detergents and Lipid-Bilayer Nanodiscs
Frontiers in molecular biosciences 6, 13 (2019) [10.3389/fmolb.2019.00013]
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Journal Article
Unusual features of the c-ring of F1FO ATP synthases
Scientific reports 9(1), 18547 (2019) [10.1038/s41598-019-55092-z]
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Journal Article
The tetrahydroxanthone-dimer phomoxanthone A is a strong inducer of apoptosis in cisplatin-resistant solid cancer cells
Bioorganic & medicinal chemistry 27(19), 115044 (2019) [10.1016/j.bmc.2019.115044]
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Journal Article
Interaction of carbohydrate-binding modules with poly(ethylene terephthalate)
Applied microbiology and biotechnology 103(12), 4801 - 4812 (2019) [10.1007/s00253-019-09760-9]
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Journal Article
Surprising Non-Additivity of Methyl-Groups in Drug-Kinase Interaction
ACS chemical biology 14(12), 2585-2594 (2019) [10.1021/acschembio.9b00476]
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Journal Article
Basal Histamine H4 Receptor Activation: Agonist Mimicry by the Diphenylalanine Motif
Chemistry - a European journal 25(64), 14613-14624 (2019) [10.1002/chem.201902801]
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Journal Article
Do We Need Anti-Prion Compounds to Treat Alzheimer’s Disease?
Molecules 24(12), 2237 - (2019) [10.3390/molecules24122237]
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Journal Article
Interference with Amyloid-β Nucleation by Transient Ligand Interaction
Molecules 24(11), 2129 - (2019) [10.3390/molecules24112129]
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Journal Article
Solution-Based Determination of Dissociation Constants for the Binding of Aβ42 to Antibodies
ChemistryOpen 8(7), 989 - 994 (2019) [10.1002/open.201900167]
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Journal Article
Toward the Mode of Action of the Clinical Stage All- d -Enantiomeric Peptide RD2 on Aβ42 Aggregation
ACS chemical neuroscience 10(12), 4800 - 4809 (2019) [10.1021/acschemneuro.9b00458]
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Journal Article
Amperometric Aptasensor for Amyloid-β Oligomer Detection by Optimized Stem-Loop Structures with an Adjustable Detection Range
ACS sensors 4(11), 3042 - 3050 (2019) [10.1021/acssensors.9b01630]
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