Institute of Biological Information Processing (IBI)

Structural Biochemistry (IBI-7)

Publications 2006

Ataka, K. ; Richter, B. ; Heberle, J.
Orientational control on the physiological reaction of cytochrome c oxidase tethered to a gold electrode
The journal of physical chemistry <Washington, DC> / B 110, 9339 - 9347 (2006) [10.1021/jp0534131]2006 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Ataka, K. ; Heberle, J.
Use of Surface Enhanced Infrared Absorption Spectroscopy (SEIRA) to probe the functionality of a protein monolayer
Biopolymers 82, 415 - 419 (2006) [10.1002/bip.20501]2006 BibTeX | EndNote: XML, Text | RIS

Badura, A. ; Esper, B. ; Ataka, K. ; Grunwald, A. ; Wöll, C. ; Kuhlmann, J. ; Heberle, J. ; Rögner, M.
Light-driven water splitting for (bio-)hydrogen production: photosystem 2 as the central part of a bioelectrochemical device
Photochemistry and photobiology 82, 1385 - 1390 (2006) [10.1562/2006-07-14-RC-969]2006 BibTeX | EndNote: XML, Text | RIS

Batra-Safferling, R. ; Abarca-Heidemann, K. ; Körschen, H. G. ; Tziatzios, C. ; Stoldt, M. ; Budyak, I. ; Willbold, D. ; Schwalbe, H. ; Klein-Seetharaman, J. ; Kaupp, U. B.
Glutamic acid-rich proteins of rod photoreceptors are natively unfolded
The journal of biological chemistry 281, 1449 - 1460 (2006) [10.1074/jbcM505012200]2006 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Budyak, I. L. ; Pipich, V. ; Mironova, O. S. ; Schlesinger, R. ; Zaccai, G. ; Klein-Seetharaman, J.
Shape and oligomerization state of the cytoplasmic domain of the phototaxis transducer II from Natronobacterium pharaonis
Proceedings of the National Academy of Sciences of the United States of America 103, 15428 - 15433 (2006) [10.1073/pnas.0607201103]2006 Files Fulltext by Pubmed Central Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Duy, C. ; Fitter, J.
How aggregation and conformational scrambling of unfolded states govern fluorescence emission spectra
Biophysical journal 90, 3704 - 3711 (2006) [10.1529/biophysj.105.078980]2006 Files Fulltext by Pubmed Central Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Efremov, R. ; Gordeliy, V. I. ; Heberle, J. ; Büldt, G.
Time-resolved microscopy on a single crystal of bacteriorhodopsin reveals lattice induced differences in the photocycle kinetics
Biophysical journal 91, 1441 - 1451 (2006) [10.1529/biophysj.106.083345]2006 Files Fulltext by OpenAccess repository Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

Granzin, J. ; Eckhoff, A. ; Weiergräber, O. H.
Crystal structure of a multi-domain immunophilin from Arabidopsis thaliana: A paradigm for regulation of plan ABC transporters
Journal of molecular biology 364, 799 - 809 (2006) [10.1016/j.jmb.2006.09.052]2006 BibTeX | EndNote: XML, Text | RIS

Haenel, K. ; Stangler, T. ; Stoldt, M. ; Willbold, D.
Solution structure of the X4 protein coded by the SARS related coronavirus reveals an immunoglobulin like fold and suggests a binding activity to integrin I domains
Journal of biomedical science 13, 281 - 293 (2006) [10.1007/s11373-005-9043-9]2006 BibTeX | EndNote: XML, Text | RIS

Hrabakova, J. ; Ataka, K. ; Heberle, J. ; Hildebrandt, P. ; Murgida, D.
Long distance electron transfer in cytochrome c oxidase immobilised on electrodes. A surface enhanced resonance Raman spectroscopic study
Physical Chemistry Chemical Physics 8, 759 - 766 (2006) [10.1039/b513379n]2006 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Iannaccone, A. ; Man, D. ; Waseem, N. ; Jennings, B. J. ; Ganapathiraju, M. ; Gallaher, K. ; Reese, E. ; Bhattacharya, S. S. ; Klein-Seetharaman, J.
Retinitis Pigmentosa Asssociated with Rhodopsin Mutations: Correlation between Phenotypic Variability and Molecular Effects.
Vision research 46, 4556 - 4567 (2006) [10.1016/j.visres.2006.08.018]2006 BibTeX | EndNote: XML, Text | RIS

Isin, B. ; Rader, A. J. ; Dhiman, H. K. ; Klein-Seetharaman, J. ; Bahar, I.
Predisposition of the Three-Dimensional Dark State Structure of Rhodopsin for Functional Conformational Changes
Proteins 65, 970 - 983 (2006) [10.1002/prot.21158]2006 BibTeX | EndNote: XML, Text | RIS

Klare, J. P. ; Bordignon, E. ; Doebber, M. ; Fitter, J. ; Kriegsmann, J. ; Chizhov, I. ; Steinhoff, H.-J. ; Engelhard, M.
Effects of Solubilization on the Structure and Function of the Sensory Rhodopsin II/Transducer Complex
Journal of molecular biology 356, 1207 - 1221 (2006) [10.1016/j.jmb.2005.12.015]2006 BibTeX | EndNote: XML, Text | RIS

Kottke, T. ; Ahmad, M. ; Batschauer, A. ; Heberle, J.
Blue-Light-Induced Changes in Arabidopsis Cryptochrome 1 Probed by FTIR Difference Spectroscopy
Biochemistry 45, 2472 - 2479 (2006) [10.1021/bi051964b]2006 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Kottke, T. ; Hegemann, P. ; Dick, B. ; Heberle, J.
The photochemistry of the light-, oxygen-, and voltage sensitive domains in the algal blue light receptor phot
Biopolymers 82, 373 - 378 (2006) [10.1002/bip.20510]2006 BibTeX | EndNote: XML, Text | RIS

Lechner, R. E. ; Fitter, J. ; Dencher, N. A. ; Hauss, T.
Low-Energy Dynamics and Biological Function
Physica / B 385-386, 835 - 837 (2006) [10.1016/j.physb.2006.05.119]2006 BibTeX | EndNote: XML, Text | RIS

Lemaitre, V. ; Wray, V. ; Willbold, D. ; Watts, A. ; Fischer, W. B.
Full length Vpu from HIV-1: Combining molecular dynamics simulations with NMR spectroscopy
Journal of biomolecular structure & dynamics 23, 485 - 496 (2006)2006 BibTeX | EndNote: XML, Text | RIS

Moukhametzianov, R. ; Klare, J. P. ; Efremov, R. ; Baeken, C. ; Göppner, A. ; Labahn, J. ; Engelhard, M. ; Büldt, G. ; Gordeliy, V. I.
Development of the signal in sensory rhodopsin and its transfer to the cognate transducer
Nature <London> 440, 115 - 119 (2006) [10.1038/nature04520]2006 BibTeX | EndNote: XML, Text | RIS

Mulkidjanian, A. Y. ; Heberle, J. ; Cherepanov, D. A.
Protons @ interfaces: implications for biological energy conversion
Biochimica et biophysica acta / Bioenergetics 1757, 913 - 930 (2006) [10.1016/j.bbabio.2006.02.015]2006 BibTeX | EndNote: XML, Text | RIS

Murugova, T. N. ; Gordeliy, V. I. ; Kuklin, A. I. ; Kovalev, J. S. ; Iurkov, V. I. ; Nürenberg, A. ; Islamov, A. K. ; Iaguzhinskiy, L. S.
Detection of new two-membrane structures in native mitochondria by the method of small-angle scattering of neutrons
Biofizika 51, 1001 - 1007 (2006)2006 BibTeX | EndNote: XML, Text | RIS

Pereira, M. M. ; Sousa, F. L. ; Teixeira, M. ; Nyquist, R. M. ; Heberle, J.
A tyrosine residue deprotonates during oxygen reduction by the caa3 reductase from Rhodothermus marinus
FEBS letters 580, 1350 - 1354 (2006) [10.1016/j.febslet.2006.01.055]2006 BibTeX | EndNote: XML, Text | RIS

Psurek, A. ; Feuerstein, S. E. ; Willbold, D. ; Scriba, G. K. E.
Nonaqueous versus aqueous capillary electrophoresis of alpha-helical polypeptides: Effect of secondary structure on separation selectivity
Electrophoresis 27, 1768 - 1775 (2006) [10.1002/elps.200500673]2006 BibTeX | EndNote: XML, Text | RIS

Schenkl, S. ; van Mourik, F. ; Friedman, N. ; Sheves, M. ; Schlesinger, R. ; Haacke, S. ; Chergui, M.
Insights into excited-state and isomerization dynamics of bacteriorhodopsin from ultrafast transient UV absorption
Proceedings of the National Academy of Sciences of the United States of America 103, 4101 - 4106 (2006) [10.1073/pnas.0506303103]2006 Files Fulltext by OpenAccess repository Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

Stangler, T. ; Hartmann, R. ; Willbold, D. ; Koenig, B. W.
Modern high resolution NMR for the study of structure, dynamics and interactions of biological macromolecules
Zeitschrift für Physikalische Chemie 220, 567 - 613 (2006) [10.1524/zpch.2006.220.5.567]2006 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Uspenskiy, I. ; Strodel, B. ; Stock, G. (Corresponding author)
Classical calculation of transient absorption spectra monitoring ultrafast electron transfer processes
Journal of chemical theory and computation 2(6), 1605 - 1617 (2006) [10.1021/ct6002127]2006 Files BibTeX | EndNote: XML, Text | RIS

Uspenskiy, I. ; Strodel, B. ; Stock, G. (Corresponding author)
Classical description of the dynamics and time-resolved spectroscopy of nonadiabatic cis-trans photoisomerizations.
Chemical physics 329(1-3), 109 - 117 (2006) [10.1016/j.chemphys.2006.07.047]2006 Files BibTeX | EndNote: XML, Text | RIS

Weiergräber, O. ; Eckhoff, A. ; Granzin, J.
Crystal structure of a plant immunophilin domain involved in regulation of MDR-type ABC transporters
FEBS letters 580, 251 - 255 (2006) [10.1016/j.febslet.2005.12.007]2006 BibTeX | EndNote: XML, Text | RIS

Weiergräber, O. H. ; Senin, I. I. ; Zernii, E. Y. ; Churumova, V. A. ; Kovaleva, N. A. ; Nazipova, A. A. ; Permyakov, S. E. ; Permyakov, E. A. ; Philippov, P. P. ; Granzin, J. ; Koch, K. W.
Tuning of a neuronal calcium sensor
The journal of biological chemistry 281, 37594 - 37602 (2006) [10.1074/jbc.M603700200]2006 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Last Modified: 25.05.2022