Bangun, A., Baumeister, P. F., Clausen, A., Weber, D., & Dunin-Borkowski, R. E. (2023, March). Wigner Distribution Deconvolution Adaptation for Live Ptychography Reconstruction. Microscopy and Microanalysis, 29, 994–1008. doi:10.1093/micmic/ozad021
Bangun, A., Melnyk, O., Marz, B., Diederichs, B., Clausen, A., Weber, D., . . . Muller-Caspary, K. (2022). Inverse Multislice Ptychography by Layer-Wise Optimisation and Sparse Matrix Decomposition. IEEE Transactions on Computational Imaging, 8, 996–1011. doi:10.1109/tci.2022.3218993
Bladt, E., Pivak, Y., Park, J., Weber, D., Jo, J., Basak, S., . . . Sun, H. (2023, July). Metal Electroplating/Stripping and 4D STEM Analysis Revealed by Liquid Phase Transmission Electron Microscopy. Microscopy and Microanalysis, 29, 1304–1305. doi:10.1093/micmic/ozad067.667
Clausen, A., Bryan, M., Pilipp, V., & Weber, D. (2021 – 2023). LiberTEM/LiberTEM-live: 0.1 – 0.2.1. LiberTEM/LiberTEM-live: 0.1 – 0.2.1. Zenodo. doi:10.5281/ZENODO.4916315
Clausen, A., Weber, D., Bryan, M., Ruzaeva, K., Migunov, V., Dagenborg, S., . . . Dunin-Borkowski, R. E. (2018 – 2024). LiberTEM/LiberTEM: 0.1 – 0.14.1. LiberTEM/LiberTEM: 0.1 – 0.14.1. Zenodo. doi:10.5281/ZENODO.1477847
Clausen, A., Weber, D., Ruzaeva, K., Bryan, M., Müller-Caspary, K., & Dunin-Borkowski, R. E. (2020 – 2024). LiberTEM/LiberTEM-blobfinder: 0.4 – 0.6.1. LiberTEM/LiberTEM-blobfinder: 0.4 – 0.6.1. Zenodo. doi:10.5281/ZENODO.3663436
Clausen, A., Weber, D., Ruzaeva, K., Migunov, V., Baburajan, A., Bahuleyan, A., . . . Dunin-Borkowski, R. (2020, June). LiberTEM: Software platform for scalable multidimensional data processing in transmission electron microscopy. Journal of Open Source Software, 5, 2006. doi:10.21105/joss.02006
Landers, D., Clancy, I., Dunin-Borkowski, R. E., Weber, D., & Stewart, A. (2023, August). TEMGYM Advanced: Software for electron lens aberrations and parallelised electron ray tracing. Ultramicroscopy, 250, 113738. doi:10.1016/j.ultramic.2023.113738
Landers, D., Clancy, I., Dunin-Borkowski, R. E., Weber, D., & Stewart, A. A. (2023, June). TEMGYM Advanced – NanoMi lens characterisation. Micron, 169, 103450. doi:10.1016/j.micron.2023.103450
Landers, D., Clancy, I., Weber, D., Dunin-Borkowski, R. E., & Stewart, A. (2023, July). TEMGYM Basic: transmission electron microscopy simulation software for teaching and training of microscope operation. Journal of Applied Crystallography, 56, 1267–1276. doi:10.1107/s1600576723005174
Oberaigner, M., Clausen, A., Weber, D., Kothleitner, G., Dunin-Borkowski, R. E., & Knez, D. (2023, January). Online Thickness Determination with Position Averaged Convergent Beam Electron Diffraction using Convolutional Neural Networks. Microscopy and Microanalysis, 29, 427–436. doi:10.1093/micmic/ozac050
Park, J., Dutta, S., Sun, H., Jo, J., Karanth, P., Weber, D., . . . Eichel, R.‐A. (2024, April). Toward Quantitative Electrodeposition via In Situ Liquid Phase Transmission Electron Microscopy: Studying Electroplated Zinc Using Basic Image Processing and 4D STEM. Small Methods, 8. doi:10.1002/smtd.202400081
Rosi, P., Clausen, A., Weber, D., Tavabi, A. H., Frabboni, S., Tiemeijer, P., . . . Grillo, V. (2023, January). Automatic Alignment of an Orbital Angular Momentum Sorter in a Transmission Electron Microscope Using a Convolutional Neural Network. Microscopy and Microanalysis, 29, 408–417. doi:10.1017/s143192762201248x
Strauch, A., Clausen, A., Weber, D., & Müller-Caspary, K. (2021). High-resolution 4D STEM dataset of SrTiO3 along the [1 0 0] axis at high magnification. High-resolution 4D STEM dataset of SrTiO3 along the [1 0 0] axis at high magnification. Zenodo. doi:10.5281/ZENODO.5113449
Strauch, A., Weber, D., Clausen, A., & Müller-Caspary, K. (2021). Synthetic 4D STEM dataset based on a SrTiO3 supercell with two additional artificial spatial frequencies. Synthetic 4D STEM dataset based on a SrTiO3 supercell with two additional artificial spatial frequencies. Zenodo. doi:10.5281/ZENODO.5113235
Strauch, A., Weber, D., Clausen, A., Lesnichaia, A., Bangun, A., März, B., . . . Müller-Caspary, K. (2021, August). Live Processing of Momentum-Resolved STEM Data for First Moment Imaging and Ptychography. Microscopy and Microanalysis, 27, 1078–1092. doi:10.1017/s1431927621012423
Weber, D., Clausen, A., & Dunin-Borkowski, R. E. (2020, March). Next-Generation Information Technology Systems for Fast Detectors in Electron Microscopy. In Handbook on Big Data and Machine Learning in the Physical Sciences (pp. 83–120). World Scientific. doi:10.1142/9789811204579_0005
Weber, D., Ehrig, S., Schropp, A., Clausen, A., Achilles, S., Hoffmann, N., . . . Schroer, C. G. (2024, February). Live Iterative Ptychography. Microscopy and Microanalysis, 30, 103–117. doi:10.1093/mam/ozae004
Weber, D., Landers, D., Huang, C., Liberti, E., Poghosyan, E., Bryan, M., . . . Dunin-Borkowski, R. E. (2024). Calibrating coordinate system alignment in a scanning transmission electron microscope using a digital twin. Calibrating coordinate system alignment in a scanning transmission electron microscope using a digital twin. arXiv. doi:10.48550/ARXIV.2403.08538
Weber, D., Lesnichaia, A., Strauch, A., Clausen, A., Bangun, A., Melnyk, O., . . . Müller-Caspary, K. (2021). Ptychography 4.0: 0.1.0. Ptychography 4.0: 0.1.0. Zenodo. doi:10.5281/ZENODO.5055126