Alina Bazarova's publications

Journal Article Flöge, K. ; Udayakumar, S. ; Sommer, J. ; Piraud, M. ; Kesselheim, S.FZJ* ; Fortuin, V. ; Günnemann, S. ; van der Weg, K. J. ; Gohlke, H.FZJ* ; Merdivan, E. ; Bazarova, A. (Corresponding author)FZJ*
OneProt: Towards multi-modal protein foundation models via latent space alignment of sequence, structure, binding sites and text encoders
PLoS Computational Biology 21(11), e1013679 (2025) [10.1371/journal.pcbi.1013679]2025 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Raseta, M. (Corresponding author)FZJ* ; Silver, S. D. ; Bazarova, A.FZJ*
Phase Transitions in an Ising Model of Agent Expectations in Financial Markets: Analytics and Numerical Results in One and Two-Dimensional Network Topologies
IEEE access 13, 181336 - 181348 (2025) [10.1109/ACCESS.2025.3623946]2025 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Master Thesis Piroozeh, Z. (Corresponding author)FZJ* ; Bazarova, A. (Thesis advisor)FZJ* ; Kalinina, O. V. (Thesis advisor)
Unravelling DNA Base Composition Behind Budding Yeast DNA Replication Origins Using Large Language Models
66 pp. (2025) [10.34734/FZJ-2026-00950]2025 = Masterarbeit, Saarland University, 2025 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Muzakka, K. F. (Corresponding author)FZJ* ; Möller, S.FZJ* ; Kesselheim, S.FZJ* ; Ebert, J.FZJ* ; Bazarova, A.FZJ* ; Hoffmann, H. ; Starke, S. ; Finsterbusch, M.FZJ*
Analysis of Rutherford backscattering spectra with CNN-GRU mixture density network
Scientific reports 14(1), 16983 (2024) [10.1038/s41598-024-67629-y]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Iacucci, M. (Corresponding author) ; Bonovas, S. ; Bazarova, A.FZJ* ; et al
Validation of a new optical diagnosis training module to improve dysplasia characterization in inflammatory bowel disease: a multicenter international study
Gastrointestinal endoscopy 99(5), 756 - 766.e4 (2024) [10.1016/j.gie.2023.11.018]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Raseta, M. ; Bazarova, A. (Corresponding author)FZJ*
On the restricted maximum likelihood estimation in a two-arm randomized clinical trial for binary endpoints
Brazilian journal of probability and statistics 38(4), 463-478 (2024) [10.1214/24-BJPS613]2024 Files BibTeX | EndNote: XML, Text | RIS

Journal Article Silver, S. D. (Corresponding author) ; Raseta, M. ; Bazarova, A.FZJ*
Stochastic resonance in the recovery of signal from agent price expectations
Chaos, solitons & fractals 174, 113718 (2023) [10.1016/j.chaos.2023.113718]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Taubert, O. ; von der Lehr, F. ; Bazarova, A.FZJ* ; Faber, C.FZJ* ; Knechtges, P. ; Weiel, M. ; Debus, C. ; Coquelin, D. ; Basermann, A. ; Streit, A. ; Kesselheim, S.FZJ* ; Götz, M. ; Schug, A. (Corresponding author)FZJ*
RNA contact prediction by data efficient deep learning
Communications biology 6(1), 913 (2023) [10.1038/s42003-023-05244-9]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Bazarova, A. (Corresponding author)FZJ* ; Raseta, M.
CARRoT: R-package for predictive modelling by means of regression, adjusted for multiple regularisation methods
PLOS ONE 18(10), e0292597 (2023) [10.1371/journal.pone.0292597]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Iacucci, M. (Corresponding author) ; Parigi, T. L. ; Bazarova, A.FZJ* ; Ghosh, S. ; Villanacci, V. ; Gui, X.
Response to: Correspondence on 'PICaSSO Histologic Remission Index (PHRI) in ulcerative colitis: development of a novel simplified histological score for monitoring mucosal healing and predicting clinical outcomes and its applicability in an artificial intelligence system' by Wong et al
Gut 72(4), 807-808 (2023) [10.1136/gutjnl-2022-327980]2023 Files BibTeX | EndNote: XML, Text | RIS

Last Modified: 04.10.2025