Publications of VSR Projects 2025
auf der Heiden, Franca ; Axer, Markus ; Amunts, Katrin ; Menzel, Miriam
		   Scattering polarimetry enables correlative nerve fiber imaging and multimodal analysis
		   Scientific Reports 15, 
		      18493 (2025), 10.1038/s41598-025-02762-w		
Bagchi, Mahasweta ; Rüßmann, Philipp ; Bihlmayer, Gustav ; Blügel, Stefan ; Ando, Yoichi ; Brede, Jens
		   Quasiparticle interference on the surface of Bi2Se3-terminated (PbSe)5(Bi2Se3)6
		   Physical Review B 112, 
		       (2025), 10.1103/h8v9-sl53		
Buffat, Jim ; Pato, Miguel ; Alonso, Kevin ; Auer, Stefan ; Carmona, Emiliano ; Maier, Stefan ; Müller, Rupert ; Rademske, Patrick ; Siegmann, Bastian ; Rascher, Uwe ; Scharr, Hanno
		   A multi-layer perceptron approach for SIF retrieval in the O_2-A absorption band from hyperspectral imagery of the HyPlant airborne sensor system
		   Remote Sensing of Environment 318, 
		      114596 (2025), 10.1016/j.rse.2024.114596		
Clark, L. ; McKinnon, B. ; Ireland, D. G. ; Glazier, D. I. ; Livingston, K. ; Rönchen, D. ; Acar, A. G. ; Achenbach, P. ; Alvarado, J. S. ; Amaryan, M. J. ; Armstrong, W. R. ; Atac, H. ; Baashen, L. ; Barion, L. ; Battaglieri, M. ; Benkel, B. ; Benmokhtar, F. ; Bianconi, A. ; Biselli, A. S. ; Booth, W. A. ; Bossù, F. ; Brinkmann, K.-Th. ; Briscoe, W. J. ; Brooks, W. K. ; Bueltmann, S. ; Cao, T. ; Capobianco, R. ; Carman, D. S. ; Celentano, A. ; Chatagnon, P. ; Ciullo, G. ; Cole, P. L. ; Contalbrigo, M. ; D'Angelo, A. ; Dashyan, N. ; De Vita, R. ; Defurne, M. ; Deur, A. ; Diehl, S. ; Djalali, C. ; Dugger, M. ; Dupre, R. ; Egiyan, H. ; El Alaoui, A. ; El Fassi, L. ; Eugenio, P. ; Fegan, S. ; Ferguson, R. F. ; Filippi, A. ; Fogler, C. ; Gates, K. ; Gavalian, G. ; Gilfoyle, G. P. ; Golubenko, A. A. ; Gothe, R. W. ; Guidal, M. ; Hakobyan, H. ; Hattawy, M. ; Hauenstein, F. ; Hayward, T. B. ; Heddle, D. ; Hobart, A. ; Holtrop, M. ; Isupov, E. L. ; Jenkins, D. ; Jiang, H. ; Jo, H. S. ; Keller, D. ; Khandaker, M. ; Kim, W. ; Klein, F. J. ; Klimenko, V. ; Kripko, A. ; Kubarovsky, V. ; Lanza, L. ; Lenisa, P. ; Li, X. ; MacGregor, I. J. D. ; Marchand, D. ; Mascagna, V. ; Matamoros, D. ; Migliorati, S. ; Mokeev, V. ; Munoz Camacho, C. ; Nadel-Turonski, P. ; Neupane, K. ; Niccolai, S. ; Niculescu, G. ; Osipenko, M. ; Pandey, P. ; Paolone, M. ; Pappalardo, L. L. ; Paremuzyan, R. ; Pasyuk, E. ; Paul, S. J. ; Phelps, W. ; Pilleux, N. ; Pokhrel, M. ; Polcher Rafael, S. ; Prok, Y. ; Reed, T. ; Richards, J. ; Ripani, M. ; Ritchie, B. G. ; Ritman, J. ; Rosner, G. ; Salgado, C. ; Schadmand, S. ; Schmidt, A. ; Schumacher, R. A. ; Sharabian, Y. G. ; Shirokov, E. V. ; Shrestha, U. ; Sokhan, D. ; Sparveris, N. ; Spreafico, M. ; Stepanyan, S. ; Strakovsky, I. I. ; Strauch, S. ; Tan, J. A. ; Tenorio, M. ; Trotta, N. ; Tyson, R. ; Ungaro, M. ; Venturelli, L. ; Voskanyan, H. ; Voutier, E. ; Watts, D. P. ; Wei, X. ; Williams, R. ; Xu, L. ; Zachariou, N. ; Zhao, Z. W. ; Zurek, M. ; The CLAS Collaboration
		   Photoproduction of the Σ+ hyperon using linearly polarized photons with CLAS
		   Physical Review C 111, 
		       (2025), 10.1103/PhysRevC.111.025204		
Jennings, Dylan ; Weber, Moritz L. ; Meise, Ansgar ; Binninger, Tobias ; Price, Conor J. ; Kindelmann, Moritz ; Reimanis, Ivar ; Matsumoto, Hiroaki ; Cao, Pengfei ; Dittmann, Regina ; Kowalski, Piotr M. ; Heggen, Marc ; Guillon, Olivier ; Mayer, Joachim ; Gunkel, Felix ; Rheinheimer, Wolfgang
		   Direct atomic-scale investigation of the coarsening mechanisms of exsolved catalytic Ni nanoparticles
		   Nature Communications 16, 
		       (2025), 10.1038/s41467-025-61971-z		
Jung, Kyesam ; Wischnewski, Kevin J. ; Eickhoff, Simon B. ; Popovych, Oleksandr V.
		   Effective workflow from multimodal MRI data to model-based prediction
		   Scientific Reports 15, 
		       (2025), 10.1038/s41598-025-04511-5		
Karyofylli, Violeta ; Raman, K. Ashoke ; Hammacher, Linus ; Danner, Yannik ; Kungl, Hans ; Karl, André ; Jodat, Eva ; Eichel, Rüdiger‐A.
		   Elucidating Parasitic Currents in Proton‐Exchange‐Membrane Electrolytic Cells via Physics‐Based and Data‐Driven Modeling
		   Electrochemical Science Advances 5, 
		       (2025), 10.1002/elsa.70000		
Kerkmann, David ; Korf, Sascha ; Nguyen, Khoa ; Abele, Daniel ; Schengen, Alain ; Gerstein, Carlotta ; Göbbert, Jens Henrik ; Basermann, Achim ; Kühn, Martin J. ; Meyer-Hermann, Michael
		   Agent-based modeling for realistic reproduction of human mobility and contact behavior to evaluate test and isolation strategies in epidemic infectious disease spread
		   Computers in Biology and Medicine 193, 
		      110269 (2025), 10.1016/j.compbiomed.2025.110269		
Knispel, Timo ; Tseplyaev, Vasily ; Bihlmayer, Gustav ; Blügel, Stefan ; Michely, Thomas ; Fischer, Jeison
		   Atomic-scale Dzyaloshinskii-Moriya-modified Yoshimori spirals in an Fe double layer on Ir(110)
		   Physical Review B 111, 
		       (2025), 10.1103/PhysRevB.111.L020405		
Kostritskii, Andrei Y. ; Kostritskaia, Yulia ; Dmitrieva, Natalia ; Stauber, Tobias ; Machtens, Jan-Philipp
		   Calcium-activated chloride channel TMEM16A opens via pi-helical transition in transmembrane segment 4
		   Proceedings of the National Academy of Sciences 122, 
		      e2421900122 (2025), 10.1073/pnas.2421900122		
Kostritskii, Andrei Y. ; Kostritskaia, Yulia ; Dmitrieva, Natalia ; Stauber, Tobias ; Machtens, Jan-Philipp
		   Calcium-activated chloride channel TMEM16A opens via pi-helical transition in transmembrane segment 4
		   Proceedings of the National Academy of Sciences 122, 
		       (2025), 10.1073/pnas.2421900122		
Le, Hoai ; Haidenbauer, Johann ; Kamada, Hiroyuki ; Kohno, Michio ; Meißner, Ulf-G. ; Miyagawa, Kazuya ; Nogga, Andreas
		   Benchmarking ΛNN three-body forces and first predictions for A=3−5 hypernuclei
		   The European Physical Journal A 61, 
		      21 (2025), 10.1140/epja/s10050-024-01474-5		
Melnikov, Nataly ; Junglas, Benedikt ; Halbi, Gal ; Nachmias, Dikla ; Zerbib, Erez ; Gueta, Noam ; Upcher, Alexander ; Zalk, Ran ; Sachse, Carsten ; Bernheim-Groswasser, Anne ; Elia, Natalie
		   The Asgard archaeal ESCRT-III system forms helical filaments and remodels eukaryotic-like membranes
		   The EMBO Journal 44, 
		      665-681 (2025), 10.1038/s44318-024-00346-4		
Morizumi, Takefumi ; Kim, Kyumhyuk ; Li, Hai ; Nag, Probal ; Dogon, Tal ; Sineshchekov, Oleg A. ; Wang, Yumei ; Brown, Leonid S. ; Hwang, Songhwan ; Sun, Han ; Bondar, Ana-Nicoleta ; Schapiro, Igor ; Govorunova, Elena G. ; Spudich, John L. ; Ernst, Oliver P.
		   Structural insights into light-gating of potassium-selective channelrhodopsin
		   Nature Communications 16, 
		       (2025), 10.1038/s41467-025-56491-9		
Othman, Sameh ; Midya, Jiarul ; Auth, Thorsten ; Gompper, Gerhard
		   Phase behavior and dynamics of active Brownian particles in an alignment field
		   Physical Review E 111, 
		      015425 (2025), 10.1103/PhysRevE.111.015425		
Overberg, Florian A. ; Jamshidi Khameneh, Narges ; Krüger, Timothy ; Engstler, Markus ; Gompper, Gerhard ; Fedosov, Dmitry A.
		   Modelling motility of Trypanosoma brucei
		   PLOS Computational Biology 21, 
		      e1013111 (2025), 10.1371/journal.pcbi.1013111		
Pandeya, Ram Prakash ; Shchukin, Konstantin P. ; Falke, Yannic ; Mussler, Gregor ; Jalil, Abdur Rehman ; Atodiresei, Nicolae ; Hasdeo, Eddwi H. ; Fedorov, Alexander ; Senkovskiy, Boris V. ; Jansen, Daniel ; Di Santo, Giovanni ; Petaccia, Luca ; Grüneis, Alexander
		   Molecular Order Induced Charge Transfer in a C60-Topological Insulator Moiré Heterostructure
		   Nano Letters 25, 
		      1220-1225 (2025), 10.1021/acs.nanolett.4c06294		
Poppe Terán, Christian ; Naz, Bibi S. ; Vereecken, Harry ; Baatz, Roland ; Fisher, Rosie A. ; Hendricks Franssen, Harrie-Jan
		   Systematic underestimation of type-specific ecosystem process variability in the Community Land Model v5 over Europe
		   Geoscientific Model Development 18, 
		      287-317 (2025), 10.5194/gmd-18-287-2025		
Raman, K. Ashoke ; Hammacher, Linus ; Kungl, Hans ; Karl, André ; Jodat, Eva ; Eichel, Rüdiger-A. ; Karyofylli, Violeta
		   Data-driven surrogate modeling for performance prediction and sensitivity analysis of transport properties in proton exchange membrane water electrolyzers
		   Applied Energy 386, 
		      125529 (2025), 10.1016/j.apenergy.2025.125529		
Rauland, Amelie ; Jung, Kyesam ; Satterthwaite, Theodore D. ; Cieslak, Matthew ; Reetz, Kathrin ; Eickhoff, Simon B. ; Popovych, Oleksandr V.
		   Weak and unstable prediction of personality from the structural connectome
		   Imaging Neuroscience 3, 
		       (2025), 10.1162/imag_a_00416		
Sangelantoni, L. ; Sobolowski, S. P. ; Soares, P. M. M. ; Goergen, K. ; Cardoso, R. M. ; Adinolfi, M. ; Dobler, A. ; Katragkou, E. ; Scoccimarro, E. ; Ferretti, R. ; Tölle, M. ; Feldmann, H.
		   Heatwave Future Changes From an Ensemble of Km‐Scale Regional Climate Simulations Within CORDEX‐FPS Convection
		   Geophysical Research Letters 52, 
		      e2024GL111147 (2025), 10.1029/2024GL111147		
Santoso, Ryan ; Guignon, Lisa ; Deissmann, Guido ; Poonoosamy, Jenna
		   Investigating the metastability of amorphous calcium carbonate by droplet microfluidics experiments using machine learning
		   Scientific Reports 15, 
		       (2025), 10.1038/s41598-025-05984-0		
Schönnenbeck, Philipp ; Junglas, Benedikt ; Sachse, Carsten
		   CryoVIA: An image analysis toolkit for the quantification of membrane structures from cryo-EM micrographs
		   Structure 33, 
		      808-819.e4 (2025), 10.1016/j.str.2025.01.013		
Sciortino, Alfredo ; Faizi, Hammad A. ; Fedosov, Dmitry A. ; Frechette, Layne ; Vlahovska, Petia M. ; Gompper, Gerhard ; Bausch, Andreas R.
		   Active membrane deformations of a minimal synthetic cell
		   Nature Physics 21, 
		      799-807 (2025), 10.1038/s41567-025-02839-3		
Skaar, Jan-Eirik Welle ; Haug, Nicolai ; Plesser, Hans Ekkehard
		   A simplified model of NMDA-receptor-mediated dynamics in leaky integrate-and-fire neurons
		   Journal of Computational Neuroscience 53, 
		      475-487 (2025), 10.1007/s10827-025-00911-8		
Wischnewski, Kevin J. ; Jarre, Florian ; Eickhoff, Simon B. ; Popovych, Oleksandr V.
		   Exploring dynamical whole-brain models in high-dimensional parameter spaces
		   PLOS One 20, 
		      e0322983 (2025), 10.1371/journal.pone.0322983		
Witzler, Christian ; Guimarães, Filipe Souza Mendes ; Mira, Daniel ; Anzt, Hartwig ; Göbbert, Jens Henrik ; Frings, Wolfgang ; Bode, Mathis
		   JuMonC: A RESTful tool for enabling monitoring and control of simulations at scale
		   Future Generation Computer Systems 164, 
		      107541 (2025), 10.1016/j.future.2024.107541		
Wu-Zhang, Bohan ; Zhang, Peixin ; Baillou, Renaud ; Lindner, Anke ; Clement, Eric ; Gompper, Gerhard ; Fedosov, Dmitry A.
		   Run-and-tumble dynamics of Escherichia coli is governed by its mechanical properties
		   Journal of The Royal Society Interface 22, 
		       (2025), 10.1098/rsif.2025.0035		
Xie, Song ; Zuo, Ke ; De Rubeis, Silvia ; Bonollo, Giorgio ; Colombo, Giorgio ; Ruggerone, Paolo ; Carloni, Paolo
		   Impact of Genetic Variants Associated with Neurodevelopmental Disorders on the WAVE Regulatory Complex
		   Journal of Chemical Information and Modeling 65, 
		      7399-7405 (2025), 10.1021/acs.jcim.5c01162		
Yu, Jun Ho ; Köster, Konstantin ; Voronina, Natalia ; Kim, Sungkyu ; Shin, Hyeon-Ji ; Kim, Kyung Sun ; Ihm, Kyuwook ; Kim, Hyungsub ; Jung, Hun-Gi ; Yazawa, Koji ; Guillon, Olivier ; Gargiani, Pierluigi ; Simonelli, Laura ; Kaghazchi, Payam ; Myung, Seung-Taek
		   Elevating Li-ion battery paradigms: sophisticated ionic architectures in lithium-excess layered oxides for unprecedented electrochemical performance
		   eScience , 
		      100376 (2025), 10.1016/j.esci.2025.100376		
Zhang, Guoren ; Hadipour, Hanif ; Pavarini, Eva
		   Nature of the high-pressure insulating state in Sr2IrO4: Mott picture
		   Physical Review B 111, 
		       (2025), 10.1103/PhysRevB.111.L121101		
Zhang, Shufei ; Jung, Kyesam ; Langner, Robert ; Florin, Esther ; Eickhoff, Simon B. ; Popovych, Oleksandr V.
		   Predicting response speed and age from task-evoked effective connectivity
		   Network Neuroscience 9, 
		      591-614 (2025), 10.1162/netn_a_00447