http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Klasen, D. (Corresponding author)FZJ* ; Fischbach, A.FZJ* ; Sydoruk, V.FZJ* ; Kochs, J. ; Bühler, J.FZJ* ; Koller, R.FZJ* ; Huber, G. (Corresponding author)FZJ*
Seed-to-plant-tracking: automated phenotyping of seeds and corresponding plants of Arabidopsis
Frontiers in Functional Plant Ecology 16, 1539424 (2025) [10.3389/fpls.2025.1539424]2025   OpenAccess BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Emonet, A. ; Pérez-Antón, M. ; Neumann, U. ; Dunemann, S. ; Huettel, B. ; Koller, R.FZJ* ; Hay, A. (Corresponding author)
Amphicarpic development in Cardamine chenopodiifolia
The new phytologist 244(3), 1041 - 1056 (2024) [10.1111/nph.19965]2024   OpenAccess BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Streun, M. (Corresponding author)FZJ* ; Eguzo, C.FZJ* ; Gorke, H.FZJ* ; Heil, R.FZJ* ; Hinz, C.FZJ* ; Keßel, D.FZJ* ; Koller, R.FZJ* ; Metzner, R.FZJ* ; Pflugfelder, D.FZJ* ; Scheins, J.FZJ* ; Scherer, B.FZJ* ; Wüstner, P.FZJ* ; van Waasen, S.FZJ*
The data acquisition system of phenoPET
Journal of Instrumentation 19(11), C11015 - (2024) [10.1088/1748-0221/19/11/C11015]2024   OpenAccess BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Yu, P. (Corresponding author) ; Li, C. ; Li, M. ; He, X. ; Wang, D. ; Li, H. ; Marcon, C. ; Li, Y. ; Perez-Limón, S. ; Chen, X. ; Delgado-Baquerizo, M. ; Koller, R.FZJ* ; Metzner, R.FZJ* ; van Dusschoten, D.FZJ* ; Pflugfelder, D.FZJ* ; Borisjuk, L. ; Plutenko, I. ; Mahon, A. ; Resende, M. F. R. ; Salvi, S. ; Akale, A. ; Abdalla, M. ; Ahmed, M. A. ; Bauer, F. M.FZJ* ; Schnepf, A.FZJ* ; Lobet, G. ; Heymans, A. ; Suresh, K. ; Schreiber, L. ; McLaughlin, C. M. ; Li, C. ; Mayer, M. ; Schön, C.-C. ; Bernau, V. ; von Wirén, N. ; Sawers, R. J. H. ; Wang, T. ; Hochholdinger, F.
Seedling root system adaptation to water availability during maize domestication and global expansion
Nature genetics 56(6), 1245 - 1256 (2024) [10.1038/s41588-024-01761-3]2024   Restricted Restricted Restricted Restricted Restricted BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Hinz, C. (Corresponding author)FZJ* ; Jahnke, S.FZJ* ; Metzner, R.FZJ* ; Pflugfelder, D.FZJ* ; Scheins, J.FZJ* ; Streun, M.FZJ* ; Koller, R. (Last author)FZJ*
Setup and characterisation according to NEMA NU 4 of the <i>pheno</i>PET scanner, a PET system dedicated for plant sciences
Physics in medicine and biology 69(5), 055019 - (2024) [10.1088/1361-6560/ad22a2]2024   OpenAccess OpenAccess OpenAccess OpenAccess OpenAccess BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Huntenburg, K. (Corresponding author) ; Pflugfelder, D.FZJ* ; Koller, R.FZJ* ; Dodd, I. C. ; van Dusschoten, D.FZJ*
Diurnal water fluxes and growth patterns in potato tubers under drought stress
Plant and soil 0, 0 (2023) [10.1007/s11104-023-06108-1]2023   OpenAccess BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Han, Y. ; Georgii, E. ; Priego-Cubero, S. ; Wurm, C. J. ; Hüther, P. ; Huber, G.FZJ* ; Koller, R.FZJ* ; Becker, C. ; Durner, J. ; Lindermayr, C. (Corresponding author)
Arabidopsis histone deacetylase HD2A and HD2B regulate seed dormancy by repressing DELAY OF GERMINATION 1
Frontiers in Functional Plant Ecology 14, 1124899 (2023) [10.3389/fpls.2023.1124899]2023   OpenAccess OpenAccess OpenAccess OpenAccess OpenAccess BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Metzner, R. (Corresponding author)FZJ* ; Chlubek, A.FZJ* ; Bühler, J. ; Pflugfelder, D.FZJ* ; Schurr, U.FZJ* ; Huber, G.FZJ* ; Koller, R.FZJ* ; Jahnke, S.FZJ*
In Vivo Imaging and Quantification of Carbon Tracer Dynamics in Nodulated Root Systems of Pea Plants
Plants 11(5), 632 - (2022) [10.3390/plants11050632]2022   OpenAccess Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Pflugfelder, D. (Corresponding author)FZJ* ; Kochs, J.FZJ* ; Koller, R.FZJ* ; Jahnke, S.FZJ* ; Mohl, C.FZJ* ; Pariyar, S.FZJ* ; Fassbender, H.FZJ* ; Nagel, K. A.FZJ* ; Watt, M.FZJ* ; van Dusschoten, D.FZJ*
The root system architecture of wheat establishing in soil is associated with varying elongation rates of seminal roots: quantification using 4D magnetic resonance imaging
The journal of experimental botany 73(7), 2050–2060 (2022) [10.1093/jxb/erab551]2022   Fulltext Published on 2022-04-05. Available in OpenAccess from 2023-04-05. Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Bonkowski, M. (Corresponding author) ; Tarkka, M. ; Razavi, B. S. ; Schmidt, H. ; Blagodatskaya, E. ; Koller, R.FZJ* ; Yu, P. ; Knief, C. ; Hochholdinger, F. ; Vetterlein, D.
Spatiotemporal Dynamics of Maize (Zea mays L.) Root Growth and Its Potential Consequences for the Assembly of the Rhizosphere Microbiota
Frontiers in microbiology 12, 619499 (2021) [10.3389/fmicb.2021.619499]2021   OpenAccess Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Bridging Microbial Functional Traits With Localized Process Rates at Soil Interfaces
Frontiers in microbiology 12, 625697 (2021) [10.3389/fmicb.2021.625697]2021   OpenAccess Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Kirschner, G. K. ; Rosignoli, S. ; Guo, L. ; Vardanega, I. ; Imani, J. ; Altmüller, J. ; Milner, S. G. ; Balzano, R. ; Nagel, K. A.FZJ* ; Pflugfelder, D.FZJ* ; Forestan, C. ; Bovina, R. ; Koller, R.FZJ* ; Stöcker, T. G. ; Mascher, M. ; Simmonds, J. ; Uauy, C. ; Schoof, H. ; Tuberosa, R. ; Salvi, S. (Corresponding author) ; Hochholdinger, F. (Corresponding author)
ENHANCED GRAVITROPISM 2 encodes a STERILE ALPHA MOTIF–containing protein that controls root growth angle in barley and wheat
Proceedings of the National Academy of Sciences of the United States of America 118(35), e2101526118 - (2021) [10.1073/pnas.2101526118]2021   OpenAccess OpenAccess OpenAccess Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Earthworms modulate the effects of climate warming on the taxon richness of soil meso- and macrofauna in an agricultural system
Agriculture, ecosystems & environment 278, 72 - 80 (2019) [10.1016/j.agee.2019.03.004]2019 BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Hünninghaus, M. ; Dibbern, D. ; Kramer, S. ; Koller, R.FZJ* ; Pausch, J. ; Schloter-Hai, B. ; Urich, T. ; Kandeler, E. ; Bonkowski, M. ; Lueders, T. (Corresponding author)
Disentangling carbon flow across microbial kingdoms in the rhizosphere of maize
Soil biology & biochemistry 134, 122 - 130 (2019) [10.1016/j.soilbio.2019.03.007]2019 BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Nabel, M. ; Schrey, S.FZJ* ; Poorter, H.FZJ* ; Koller, R.FZJ* ; Nagel, K.FZJ* ; Temperton, V. M. ; Dietrich, C. ; Briese, C. ; Jablonowski, N. D. (Corresponding author)FZJ*
Coming Late for Dinner: Localized Digestate Depot Fertilization for Extensive Cultivation of Marginal Soil With Sida hermaphrodita
Frontiers in plant science 9, 1095 (2018) [10.3389/fpls.2018.01095] special issue: "Options for Transition of Land Towards Intensive and Sustainable Agricultural Systems"2018   Fulltext Fulltext Fulltext Fulltext Fulltext OpenAccess OpenAccess OpenAccess OpenAccess OpenAccess OpenAccess Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Pflugfelder, D. (Corresponding author)FZJ* ; Metzner, R.FZJ* ; van Dusschoten, D.FZJ* ; Reichel, R.FZJ* ; Jahnke, S.FZJ* ; Koller, R.FZJ*
Non-invasive imaging of plant roots in different soils using magnetic resonance imaging (MRI)
Plant methods 13(1), 102 (2017) [10.1186/s13007-017-0252-9]2017   OpenAccess OpenAccess OpenAccess OpenAccess OpenAccess OpenAccess Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Nabel, M.FZJ* ; Schrey, S.FZJ* ; Poorter, H.FZJ* ; Koller, R.FZJ* ; Jablonowski, N. D. (Corresponding author)FZJ*
Effects of digestate fertilization on Sida hermaphrodita : Boosting biomass yields on marginal soils by increasing soil fertility
Biomass and bioenergy 107, 207 - 213 (2017) [10.1016/j.biombioe.2017.10.009]2017   OpenAccess OpenAccess OpenAccess OpenAccess OpenAccess OpenAccess Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Hünninghaus, M. ; Koller, R.FZJ* ; Kramer, S. ; Marhan, S. ; Kandeler, E. ; Bonkowski, M. (Corresponding author)
Changes in bacterial community composition and soil respiration indicate rapid successions of protist grazers during mineralization of maize crop residues
Pedobiologia 62, 1 - 8 (2017) [10.1016/j.pedobi.2017.03.002]2017   Restricted Restricted Restricted Restricted Restricted Restricted BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Van Hoesel, W. ; Tiefenbacher, A. ; König, N. ; Dorn, V. M. ; Hagenguth, J. F. ; Prah, U. ; Widhalm, T. ; Wiklicky, V. ; Koller, R.FZJ* ; Bonkowski, M. ; Lagerlöf, J. ; Ratzenböck, A. ; Zaller, J. G. (Corresponding author)
Single and Combined Effects of Pesticide Seed Dressings and Herbicides on Earthworms, Soil Microorganisms, and Litter Decomposition
Frontiers in Functional Plant Ecology 8, 215 (2017) [10.3389/fpls.2017.00215]2017   OpenAccess OpenAccess OpenAccess OpenAccess OpenAccess OpenAccess Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Geisen, S. (Corresponding author) ; Mitchell, E. A. D. ; Wilkinson, D. M. ; Adl, S. ; Bonkowski, M. ; Brown, M. W. ; Fiore-Donno, A. M. ; Heger, T. J. ; Jassey, V. E. J. ; Krashevska, V. ; Lahr, D. J. G. ; Marcisz, K. ; Mulot, M. ; Payne, R. ; Singer, D. ; Anderson, O. R. ; Charman, D. J. ; Ekelund, F. ; Griffiths, B. S. ; Rønn, R. ; Smirnov, A. ; Bass, D. ; Belbahri, L. ; Berney, C. ; Blandenier, Q. ; Chatzinotas, A. ; Clarholm, M. ; Dunthorn, M. ; Feest, A. ; Fernández, L. D. ; Foissner, W. ; Fournier, B. ; Gentekaki, E. ; Hájek, M. ; Helder, J. ; Jousset, A. ; Koller, R.FZJ* ; Kumar, S. ; La Terza, A. ; Lamentowicz, M. ; Mazei, Y. ; Santos, S. S. ; Seppey, C. V. W. ; Spiegel, F. W. ; Walochnik, J. ; Winding, A. ; Lara, E.
Soil protistology rebooted: 30 fundamental questions to start with
Soil biology & biochemistry 111, 94 - 103 (2017) [10.1016/j.soilbio.2017.04.001]2017   Restricted Restricted Restricted Restricted Restricted Restricted Published on 2017-04-13. Available in OpenAccess from 2019-04-13. Published on 2017-04-13. Available in OpenAccess from 2019-04-13. Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Geisen, S. (Corresponding author)Extern* ; Koller, R.FZJ* ; Hünninghaus, M. ; Dumack, K. ; Urich, T. ; Bonkowski, M.
The soil food web revisited: Diverse and widespread mycophagous soil protists
Soil biology & biochemistry 94, 10 - 18 (2016) [10.1016/j.soilbio.2015.11.010]2016   Restricted Restricted Restricted Restricted Restricted Restricted BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Dumack, K. (Corresponding author) ; Koller, R.FZJ* ; Weber, B. ; Bonkowski, M.
Estimated abundance and diversity of heterotrophic protists in South African biocrusts
South African journal of science 112(7/8), 1-5 (2016) [10.17159/sajs.2016/20150302]2016   OpenAccess OpenAccess OpenAccess OpenAccess OpenAccess OpenAccess Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Pesticide seed dressings can affect the activity of various soil organisms and reduce decomposition of plant material
BMC ecology 16(1), 37 (2016) [10.1186/s12898-016-0092-x]2016   OpenAccess OpenAccess OpenAccess OpenAccess OpenAccess OpenAccess Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Kramer, S. ; Dibbern, D. ; Moll, J. ; Huenninghaus, M. ; Koller, R.FZJ* ; Krueger, D. ; Marhan, S. ; Urich, T. ; Wubet, T. ; Bonkowski, M. ; Buscot, F. ; Lueders, T. (Corresponding author) ; Kandeler, E.
Resource Partitioning between Bacteria, Fungi, and Protists in the Detritusphere of an Agricultural Soil
Frontiers in microbiology 7, 1524 (2016) [10.3389/fmicb.2016.01524]2016   OpenAccess OpenAccess OpenAccess OpenAccess OpenAccess OpenAccess Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Geisen, S. (Corresponding author) ; Rosengarten, J.FZJ* ; Koller, R.FZJ* ; Mulder, C. ; Urich, T. ; Bonkowski, M.
Pack hunting by a common soil amoeba on nematodes
Environmental microbiology 17(11), 4538–4546 (2015) [10.1111/1462-2920.12949]2015 BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Weidner, S. (Corresponding author) ; Koller, R.FZJ* ; Latz, E. ; Kowalchuk, G. ; Bonkowski, M. ; Scheu, S. ; Jousset, A.
Bacterial diversity amplifies nutrient-based plant-soil feedbacks
Functional ecology 29(10), 1341 - 1349 (2015) [10.1111/1365-2435.12445]2015   Fulltext BibTeX | EndNote: XML, Text | RIS