Publications

Publications SDL Neuroscience

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Contribution to a book  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;
Phenomenological Modeling of Diverse and Heterogeneous Synaptic Dynamics at Natural Density
New Aspects in Analyzing the Synaptic Organization of the Brain / Lübke, Joachim H.R. (Editor) ; New York, NY : Springer US, 2024, Chapter 15 ; ISSN: 0893-2336=1940-6045 ; ISBN: 978-1-0716-4018-0=978-1-0716-4019-7 ; doi:10.1007/978-1-0716-4019-7 New York, NY : Springer US, Neuromethods 212, 277 - 321 () [10.1007/978-1-0716-4019-7_15] OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Poster (Other)  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;
Virtual Brain Twins in EBRAINS
EDITH-CSA Ecosystem Meeting​, AmsterdamAmsterdam, Netherlands, 15 Jul 2024 - 16 Jul 20242024-07-152024-07-16 [10.34734/FZJ-2024-05114] OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Impact of quantum and neuromorphic computing on biomolecular simulations: Current status and perspectives
Current opinion in structural biology 87, 102817 () [10.1016/j.sbi.2024.102817] OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Modeling and simulating spiking neurons and synaptic plasticity with NESTML on SpiNNaker
International Conference on Neuromorphic Computing and Engineering (ICNCE), AachenAachen, Germany, 3 Jun 2024 - 6 Jun 20242024-06-032024-06-06 BibTeX | EndNote: XML, Text | RIS

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Multiscale co-simulation design pattern for neuroscience applications
Frontiers in neuroinformatics 18, 1156683 () [10.3389/fninf.2024.1156683] OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Vast Parameter Space Exploration of the Virtual Brain: A Modular Framework for Accelerating the Multi-Scale Simulation of Human Brain Dynamics
Applied Sciences 14(5), 2211 () [10.3390/app14052211] OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Emergent communication enhances foraging behavior in evolved swarms controlled by spiking neural networks
Swarm intelligence 18, 1-28 () [10.1007/s11721-023-00231-6] OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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PyDapsys: an open-source library for accessing electrophysiology data recorded with DAPSYS
Frontiers in neuroinformatics 17, 1250260 () [10.3389/fninf.2023.1250260] OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Interplay between homeostatic synaptic scaling and homeostatic structural plasticity maintains the robust firing rate of neural networks
eLife 12, RP88376 () [10.7554/eLife.88376.1]   Download fulltextFulltext BibTeX | EndNote: XML, Text | RIS

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Enhanced simulations of whole-brain dynamics using hybrid resting-state structural connectomes
Frontiers in computational neuroscience 17, 1295395 () [10.3389/fncom.2023.1295395] OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Heat: accelerating massive data processing in Python
CS & Physics Meet-Up by Lamarr & B3D, TU DortmundTU Dortmund, Germany, 29 Nov 2023 - 1 Dec 20232023-11-292023-12-01 BibTeX | EndNote: XML, Text | RIS

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Accelerating massive data processing in Python with Heat
Artificial Intelligence Symposium on Theory, Application and Research 2023, AI STAR#2023, ESOC, DarmstadtESOC, Darmstadt, Germany, 27 Sep 2023 - 28 Sep 20232023-09-272023-09-28 BibTeX | EndNote: XML, Text | RIS

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European Human Brain Project Celebrates Successful Conclusion
Innovatives Supercomputing in Deutschland 32-2, 28-29 ()   Download fulltextFulltext BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Poster (After Call)  ;  ;  ;
Modeling and simulating spiking neurons and synaptic plasticity with NESTML
JSC's End-of-Year Colloquium 2023, JülichJülich, Germany, 5 Dec 2023 - 5 Dec 20232023-12-052023-12-05 BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Poster (After Call)
Adjoint MPI for Non-Additive Separable Loss Functions
ISC High Performance 2023, HamburgHamburg, Germany, 21 May 2023 - 25 May 20232023-05-212023-05-25 BibTeX | EndNote: XML, Text | RIS

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EBRAINS Computing Services
Human Brain Project Summit 2023, MarseilleMarseille, France, 28 Mar 2023 - 31 Mar 20232023-03-282023-03-31 BibTeX | EndNote: XML, Text | RIS

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Simulation and Data Lab Neuroscience - Bridging Neuroscience and HPC
Bernstein Conference for Computational Neuroscience, BerlinBerlin, Germany, 27 Sep 2023 - 29 Sep 20232023-09-272023-09-29 BibTeX | EndNote: XML, Text | RIS

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Simulation and Data Lab Neuroscience - Bridging Neuroscience and HPC
International Conference for High Performance Computing, Networking, Storage, and Analysis, SC23, DenverDenver, USA, 12 Nov 2023 - 17 Nov 20232023-11-122023-11-17 BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Book/Dissertation / PhD Thesis
Gradient-Free Optimization of Artificial and Biological Networks using Learning to Learn
Jülich : Forschungszentrum Jülich GmbH Zentralbibliothek, Verlag, Schriften des Forschungszentrums Jülich IAS Series 55, 149 pp. () [10.34734/FZJ-2023-03569] = Dissertation, RWTH Aachen University, 2023 OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Gradient free optimization of neuroscience models at different scales with L2L
HBP Summit 2023, MarseilleMarseille, France, 27 Mar 2023 - 31 Mar 20232023-03-272023-03-31 [10.34734/FZJ-2023-02678] OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Microscale connectivity estimation from spiking activity in macaque visuomotor cortices
SMHB General Assembly, JuelichJuelich, Germany, 4 Apr 2023 - 5 Apr 20232023-04-042023-04-05 BibTeX | EndNote: XML, Text | RIS

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The World of EBRAINS Tools & Services
HBP Summit 2023, MarseilleMarseille, France, 28 Mar 2023 - 31 Mar 20232023-03-282023-03-31 BibTeX | EndNote: XML, Text | RIS

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The World of EBRAINS Tools & Services
NWG Göttingen, GöttingenGöttingen, Germany, 22 Mar 2023 - 24 Mar 20232023-03-222023-03-24 BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Poster (After Call)  ;  ;  ;
Modeling and simulating spiking neurons and synaptic plasticity with NESTML
HBP Summit 2023, MarseilleMarseille, France, 27 Mar 2023 - 31 Mar 20232023-03-272023-03-31 BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Poster (After Call)  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;
Estimation of microscale connectivity from spiking activity of macaque visuomotor cortices
7th HBP students conference, MadridMadrid, Spain, 18 Jan 2023 - 20 Jan 20232023-01-182023-01-20 BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Poster (After Call)  ;  ;  ;  ;  ;  ;  ;
Gradient free optimization of neuroscience models at different scales with L2L
CASA Kick off, JuelichJuelich, Germany, 26 Jan 2023 - 26 Jan 20232023-01-262023-01-26 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Poster (After Call)  ;  ;  ;  ;
Emergent self-coordination in simulated swarms steered by Spiking Neural Networks
HBP Student Conference 2023, Rey Juan Carlos UniversityMadrid, Rey Juan Carlos University, Spain, 18 Jan 2023 - 20 Jan 20232023-01-182023-01-20 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Vast TVB parameter space exploration: A Modular Framework for Accelerating the Multi-Scale Simulation of Human Brain Dynamics
JSC's End-of-Year Colloquium 2023, JülichJülich, Germany, 5 Dec 2023 - 5 Dec 20232023-12-052023-12-05 BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Bachelor Thesis
Implementation of a Spiking Neural Network Model with Biologically Plausible Connectivity Characteristics for Neuromorphic Benchmarking
65 p. () = Bachelorarbeit, RWTH Aachen, 2022  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Poster (After Call)  ;  ;
The Scientific Liaison Unit of EBRAINS - Our support for you!
6th HBP Student Conference on Interdisciplinary Brain Research, onlineonline, Austria, 22 Feb 2022 - 25 Feb 20222022-02-222022-02-25 BibTeX | EndNote: XML, Text | RIS

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SLU can help bring your research to EBRAINS infrastructure
Bernstein Conference 2022, BerlinBerlin, Germany, 13 Sep 2022 - 17 Sep 20222022-09-132022-09-17 BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Poster (After Call)  ;  ;
The Scientific Liaison Unit of EBRAINS - Our support for you!
Young Researchers Event 2022: EBRAINS – a digital European Infrastructure for next generation basic & clinical neuroscience, CopenhagenCopenhagen, Denmark, 16 May 2022 - 16 May 20222022-05-162022-05-16 BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Master Thesis
An applied waveform relaxation method for distributed gap junctions in the Arbor simulation library
48 pp. () = Masterarbeit, RWTH Aachen, 2022 BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Poster (Other)  ;
A System-on-Chip Based Hybrid Neuromorphic Compute (HNC) Node Architecture for Reproducible Hyper-Real-Time Simulations of Spiking Neural Networks
ACA farewell meeting, JülichJülich, Germany, 19 Sep 2022 - 20 Sep 20222022-09-192022-09-20 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Proceedings  ;  ;  ;  ;  ;
6th HBP Student Conference on Interdisciplinary Brain Research
6th HBP Student Conference on Interdisciplinary Brain Research, Virtual eventVirtual event, Germany, 22 Feb 2022 - 25 Feb 20222022-02-222022-02-25 Frontiers Media SA () [10.3389/978-2-88971-014-0] BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Poster (After Call)
RateML: a code generation tool for BrainNetwork Models
6th HBP Student Conference on Interdisciplinary Brain Research, Innsbruck, OnlineInnsbruck, Online, Austria, 22 Feb 2022 - 25 Feb 20222022-02-222022-02-25 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Poster (After Call)
RateML: A Code Generation Tool for Brain Network Model
From Cortical Microcircuits to Consciousness, Corticon, ParisParis, France, 11 Apr 2022 - 13 Apr 20222022-04-112022-04-13 OpenAccess  Download fulltext Files  Download fulltextFulltext Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Poster (After Call)
RateML: A Code Generation Tool for Brain Network Models
Association of Scientific Studies of Consciousness Meeting, ASSC25, AmsterdamAmsterdam, Netherlands, 12 Jul 2022 - 15 Jul 20222022-07-122022-07-15 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Master Thesis
Parallelization and optimization of measures in Network Neuroscience
107 p. () = Masterarbeit, FH Aachen Campus Jülich, 2022 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article  ;  ;  ;  ;  ;  ;  ;  ;  ;
Exploring Parameter and Hyper-Parameter Spaces of Neuroscience Models on High Performance Computers With Learning to Learn
Frontiers in computational neuroscience 16, 885207 () [10.3389/fncom.2022.885207] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Brain signal predictions from multi-scale networks using a linearized framework
PLoS Computational Biology 18(8), e1010353 () [10.1371/journal.pcbi.1010353] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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A System-on-Chip Based Hybrid Neuromorphic Compute Node Architecture for Reproducible Hyper-Real-Time Simulations of Spiking Neural Networks
Frontiers in neuroinformatics 16, 884033 () [10.3389/fninf.2022.884033] special issue: "Neuroscience, Computing, Performance, and Benchmarks: Why It Matters to Neuroscience How Fast We Can Compute" OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Deploying and Optimizing Embodied Simulations of Large-Scale Spiking Neural Networks on HPC Infrastructure
Frontiers in neuroinformatics 16, 884180 () [10.3389/fninf.2022.884180] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article  ;  ;  ;  ;  ;  ;
RateML: A Code Generation Tool for Brain Network Models
Frontiers in network physiology 2, 826345 () [10.3389/fnetp.2022.826345] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;
Brain simulation as a cloud service: The Virtual Brain on EBRAINS
NeuroImage 251, 118973 - () [10.1016/j.neuroimage.2022.118973] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article  ;  ;  ;  ;  ;  ;  ;  ;  ;
ConGen a simulator-agnostic visual language for definition and generation of connectivity in large and multiscale neural networks
Frontiers in neuroinformatics 15, 766697 () [10.3389/fninf.2021.766697] special issue: "Neuroscience, Computing, Performance, and Benchmarks: Why It Matters to Neuroscience How Fast We Can Compute" OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Poster (Other)
Hodgkin-Huxley Sensitivity Analysis with Arbor
HBP Summit 2021: Pushing the Boundaries of Brain Research, BrusselsBrussels, Belgium, 10 Oct 2021 - 15 Oct 20212021-10-102021-10-15 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Poster (Other)
Hodgkin-Huxley Sensitivity Analysis with Arbor
Bernstein Conference 2021, Berlin / onlineBerlin / online, Germany, 21 Sep 2021 - 23 Sep 20212021-09-212021-09-23 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Bachelor Thesis
Evolving autonomous agents with simulated brains using L2L and Netlogo
Jülich 76 p () = Bachelorarbeit, RWTH Aachen, 2021 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Master Thesis
Deep learning for segmentation of 3D-PLI images
60 pp. () = Masterarbeit, RWTH Aachen, 2021 BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article  ;  ;
Long-Term Desynchronization by Coordinated Reset Stimulation in a Neural Network Model With Synaptic and Structural Plasticity
Frontiers in physiology 12, 716556 () [10.3389/fphys.2021.716556] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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On the influence of prior information evaluated by fully Bayesian criteria in a personalized whole-brain model of epilepsy spread
PLoS Computational Biology 17(7), e1009129 - () [10.1371/journal.pcbi.1009129] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Master Thesis
Investigating self-supervised learning for diffusion MRI-based microstructure imaging
63 pages () = Masterarbeit, FH Aachen, 2021 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Contribution to a conference proceedings/Contribution to a book  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;
JUWELS Booster – A Supercomputer for Large-Scale AI Research
High Performance Computing / Jagode, Heike (Editor)
ISC High Performance 2021, ISC21, DigitalDigital, Germany, 24 Jun 2021 - 2 Jul 20212021-06-242021-07-02
Lecture Notes in Computer Science 12761, 453 - 468 () [10.1007/978-3-030-90539-2_31] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Poster (After Call)  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;
Hyper-parameter space exploration of neuroscience models on high performance computers with the Learning to Learn framework
HBP Summit 2021, VirtualVirtual, Belgium, 12 Oct 2021 - 15 Oct 20212021-10-122021-10-15 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Structural plasticity as a connectivity generation and optimization algorithm in neural networks
Jülich : Forschungszentrum Jülich GmbH Zentralbibliothek, Verlag, Schriften des Forschungszentrums Jülich IAS Series 47, 167 pp. () = Dissertation, RWTH Aachen University, 2021 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Contribution to a conference proceedings/Contribution to a book  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;
Fenix: Distributed e-Infrastructure Services for EBRAINS
Brain-Inspired Computing / Amunts, Katrin (Editor) [https://orcid.org/0000-0001-5828-0867] ; Cham : Springer International Publishing, 2021, Chapter 6 ; ISSN: 0302-9743=1611-3349 ; ISBN: 978-3-030-82426-6=978-3-030-82427-3 ; doi:10.1007/978-3-030-82427-3
BrainComp 2019 - Workshop on Brain-Inspired Computing, BrainComp 2019, CetraroCetraro, Italy, 15 Jul 2019 - 19 Jul 20192019-07-152019-07-19
Cham : Springer International Publishing, Lecture Notes in Computer Science 12339, 81 - 89 () [10.1007/978-3-030-82427-3_6] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article  ;  ;  ;  ;  ;  ;  ;
Inter-subject and inter-parcellation variability of resting-state whole-brain dynamical modeling
NeuroImage 236, 118201 - () [10.1016/j.neuroimage.2021.118201] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Modular Supercomputing for Neuroscience
Brain-Inspired Computing / Amunts, Katrin (Editor) [https://orcid.org/0000-0001-5828-0867] ; Cham : Springer International Publishing, 2021, Chapter 5 ; ISSN: 0302-9743=1611-3349 ; ISBN: 978-3-030-82426-6=978-3-030-82427-3 ; doi:10.1007/978-3-030-82427-3
BrainComp 2019 - Workshop on Brain-Inspired Computing, CetraroCetraro, Italy, 15 Jul 2019 - 19 Jul 20192019-07-152019-07-19
Cham : Springer International Publishing, Lecture Notes in Computer Science 12339, 63-80 () [10.1007/978-3-030-82427-3_5] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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RateML, a spin-off of the NeuroML and LEMS Domain Specific Languages, tailored to generate rate-based-models suited for simulators such as the Virtual Brain (TVB) featuring high performance computing and parameter sweep capabilities.
Bernstein Conference, OnlineOnline, Germany, 29 Sep 2020 - 1 Oct 20202020-09-292020-10-01 [10.12751/NNCN.BC2020.0272] BibTeX | EndNote: XML, Text | RIS

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HeAT – a Distributed and GPU-accelerated Tensor Framework for Data Analytics
2020 IEEE International Conference on Big Data (Big Data), AtlantaAtlanta, GA, 10 Dec 2020 - 13 Dec 20202020-12-102020-12-13 IEEE 276-287 () [10.1109/BigData50022.2020.9378050] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Archival Data Repository Services to Enable HPC and Cloud Workflows in a Federated Research e-Infrastructure
2020 IEEE/ACM International Workshop on Interoperability of Supercomputing and Cloud Technologies (SuperCompCloud), AtlantaAtlanta, GA, 11 Nov 2020 - 11 Nov 20202020-11-112020-11-11 IEEE 39-44 () [10.1109/SuperCompCloud51944.2020.00012] BibTeX | EndNote: XML, Text | RIS

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Processing capacity of recurrent spiking networks
Organisation For Computational Neuroscience - 29th Annual Computational Neuroscience Meeting, CNS2020, OnlineOnline, Online, 18 Jul 2020 - 23 Jul 20202020-07-182020-07-23 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Ensemble Kalman Filter Optimizing Deep Neural Networks: An Alternative Approach to Non-performing Gradient Descent
Machine Learning, Optimization, and Data Science
The Sixth International Conference on Machine Learning, Optimization, and Data Science, LOD2020, SienaSiena, Italy, 19 Jul 2020 - 22 Jul 20202020-07-192020-07-22
Cham : Springer, Lecture Notes in Computer Science 12566, : 5th ed., 78-92 () [10.1007/978-3-030-64580-9_7] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Analytical and fast Fiber Orientation Distribution reconstruction in 3D-Polarized Light Imaging
Medical image analysis 65, 101760 () [10.1016/j.media.2020.101760] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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NEST3 and NESTML: You'll love the new NEST user experience
Human Brain Project Summit 2020, AthensAthens, Greece, 4 Feb 2020 - 6 Feb 20202020-02-042020-02-06 BibTeX | EndNote: XML, Text | RIS

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Staged deployment of interactive multi-application HPC workflows
The 2019 International Conference on High Performance Computing & Simulation, HPCS 2019, DublinDublin, Ireland, 15 Jul 2019 - 19 Jul 20192019-07-152019-07-19 IEEE 305-311 () [10.1109/HPCS48598.2019.9188104] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Untersuchung räumlicher Muster in meteorologischen Modellen für die Ensemble-Kalibrierung mittels tiefer neuronaler Netze
64 pages () = Bachelorarbeit, FH Aachen, 2019 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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In Transit Coupling of Neuroscientific Simulation and Analysis on High Performance Computing Systems
61 p. () = Masterarbeit, FH Aachen, 2019 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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ICEI: HPC Centres Delivering Federated E-Infrastructure Services
34th International Conference, ISC High Performance 2019, ISC 2019, Frankfurt am MainFrankfurt am Main, Germany, 21 Jun 2019 - 25 Jun 20192019-06-212019-06-25 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Neuroscience Students Introduced to the World of HPC at HPC for Neuroscience Workshop
Innovatives Supercomputing in Deutschland 17(2), 30 ()   Download fulltextFulltext BibTeX | EndNote: XML, Text | RIS

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Performance Comparison for Neuroscience Application Benchmarks
Lecture Notes in Computer Science
ISC High Performance 2019, ISC, FrankfurtFrankfurt, Germany, 16 Jun 2019 - 20 Jun 20192019-06-162019-06-20
Heidelberg : Springer, Lecture Notes in Computer Science 11887, () [10.1007/978-3-030-34356-9_31] special issue: "High Performance Computing" (978-3-030-34356-9) Embargoed OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Das Helmholtz Analytics Toolkit (HeAT) - Eine High Performance Computing (HPC) Programmbibliothek für wissenschaftliche Big Data Analytik / The Helmholtz Analytics Toolkit (HeAT) - A High Performance Computing (HPC) Library for Scientific Big Data Analytics
Jülich : Bernstein Koordinationsstelle (BCOS) -, 32-33 () special issue: "Bernstein Feature 2019" OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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The Helmholtz Analytics Toolkit (HeAT) - A Scientific Big Data Library for HPC -
Proceedings
Extreme Data Workshop 2018, JülichJülich, Germany, 18 Sep 2018 - 19 Sep 20182018-09-182018-09-19
Jülich : Forschungszentrum Jülich GmbH Zentralbibliothek, IAS Series 40, 57-60 () OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Spiking Neural Networks that Learn to Learn / Gepulste Neuronale Netze lernen zu lernen
Jülich : Bernstein Koordinationsstelle (BCOS) -, 8-9 () special issue: "Bernstein Feature 2019" OpenAccess  Download fulltext Files  Download fulltextFulltext Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Learning to Learn on High Performance Computing
Society for Neuroscience Meeting 2019, ChicagoChicago, USA, 19 Oct 2019 - 23 Oct 20192019-10-192019-10-23 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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NESTML: An extensible modeling language for biologically plausible neural networks
NEST Conference 2019: A Forum for Users and Developers, AasAas, Norway, 24 Jun 2019 - 25 Jun 20192019-06-242019-06-25 BibTeX | EndNote: XML, Text | RIS

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Impact of brain parcellation on parameter optimization of the whole-brain dynamical models
Organization for Human Brain Mapping 2019, OHBM 2019, RomeRome, Italy, 9 Jun 2019 - 13 Jun 20192019-06-092019-06-13 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Impact of brain parcellation on parameter optimization of the whole-brain dynamical models
CNS*2019, BarcelonaBarcelona, Spain, 13 Jul 2019 - 17 Jul 20192019-07-132019-07-17 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Editorial: Linking experimental and computational connectomics
Network neuroscience 3(4), 902-904 () [10.1162/netn_e_00108] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Learning to Learn on High Performance Computing
OCNS2019, BarcelonaBarcelona, Spain, 13 Jul 2019 - 17 Jul 20192019-07-132019-07-17 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Tracing of Nerve Fibers Through Brain Regions of Fiber Crossings in Reconstructed 3D-PLI Volumes
Bildverarbeitung für die Medizin 2019
Bildverarbeitung für die Medizin, LübeckLübeck, Germany, 17 Mar 2019 - 19 Mar 20192019-03-172019-03-19
Berlin, Heidelberg : Springer 62 - 67 () [10.1007/978-3-658-25326-4_17] BibTeX | EndNote: XML, Text | RIS

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Arbor — A Morphologically-Detailed Neural Network Simulation Library for Contemporary High-Performance Computing Architectures
2019 27th Euromicro International Conference on Parallel, Distributed and Network-Based Processing (PDP), PaviaPavia, Italy, 13 Feb 2019 - 15 Feb 20192019-02-132019-02-15 IEEE 274-282 () [10.1109/EMPDP.2019.8671560] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Quantitative Three-Dimensional Reconstructions of Excitatory Synaptic Boutons in Layer 5 of the Adult Human Temporal Lobe Neocortex: A Fine-Scale Electron Microscopic Analysis
Cerebral cortex 29(7), 2797–2814 () [10.1093/cercor/bhy146]  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Streaming Live Neuronal Simulation Data into Visualization and Analysis
High Performance Computing / Yokota, Rio (Editor) [0000-0001-7573-7873] ; Cham : Springer International Publishing, 2018, Chapter 18 ; ISSN: 0302-9743=1611-3349 ; ISBN: 978-3-030-02464-2=978-3-030-02465-9 ; doi:10.1007/978-3-030-02465-9
ISC High Performance 2018, FrankfurtFrankfurt, Germany, 24 Jun 2018 - 28 Jun 20182018-06-242018-06-28
Cham : Springer International Publishing, Lecture Notes in Computer Science 11203, 258 - 272 () [10.1007/978-3-030-02465-9_18] Embargoed OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Reproducible Neural Network Simulations: Statistical Methods for Model Validation on the Level of Network Activity Data
Frontiers in neuroinformatics 12, 90 () [10.3389/fninf.2018.00090] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Rigorous Neural Network Simulations: A Model Substantiation Methodology for Increasing the Correctness of Simulation Results in the Absence of Experimental Validation Data
Frontiers in neuroinformatics 12, 81 () [10.3389/fninf.2018.00081] special issue: "Reproducibility and Rigour in Computational Neuroscience" OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Automatically generating HPC-optimized code for simulations using neural mass models in The Virtual Brain
Society for Neuroscience Meeting 2018, San DiegoSan Diego, USA, 3 Nov 2018 - 7 Nov 20182018-11-032018-11-07 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Co-Design Project 8 The Virtual Brain (TVB): Interfacing The Virtual Brain with HBP Platforms
Human Brain Project Summit, MaastrichtMaastricht, Netherlands, 16 Oct 2018 - 18 Oct 20182018-10-162018-10-18 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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The Virtual Epileptic Patient Workflow
Human Brain Project Summit, MaastrichtMaastricht, Netherlands, 16 Oct 2018 - 18 Oct 20182018-10-162018-10-18 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Arbor: A morphologically detailed neural network simulation library for modern high performance computer architectures
Human Brain Project Summit, MaastrichtMaastricht, Netherlands, 15 Oct 2018 - 18 Oct 20182018-10-152018-10-18 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Code Generation in Computational Neuroscience: A Review of Tools and Techniques
Frontiers in neuroinformatics 12, 68 () [10.3389/fninf.2018.00068] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Automatically Selecting a Suitable Integration Scheme for Systems of Differential Equations in Neuron Models
Frontiers in neuroinformatics 12, 50 () [10.3389/fninf.2018.00050] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Fenix Consortium to build a Federated Data and Computing Infrastructure for the Human Brain Project and other communities
Innovatives Supercomputing in Deutschland 16(1), 26-28 () OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Human Brain Project Successfully Enters the Next Phase
Innovatives Supercomputing in Deutschland 16(1), 17-19 () OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Modular Science: Towards Online Multi Application Coordination on Inhomogeneous High Performance Computing and Neuromorphic Hardware Systems
27th Annual Computational Neuroscience Meeting, CNS 2018, SeattleSeattle, USA, 13 Jul 2018 - 18 Jul 20182018-07-132018-07-18 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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From MRI data to the whole-brain dynamical models: a work-flow of the Virtula Brain platform
INM-ICS Retreat 2018, JülichJülich, Germany, 27 Jun 2018 - 28 Jun 20182018-06-272018-06-28 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Toward Rigorous Parameterization of Underconstrained Neural Network Models Through Interactive Visualization and Steering of Connectivity Generation
Frontiers in neuroinformatics 12, 32 () [10.3389/fninf.2018.00032] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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NESTML - die domänenspezifische Sprache für den NEST-Simulator neuronaler Netzwerke im Human Brain Project
Aachen : Shaker Verlag, Aachener Informatik-Berichte, Software Engineering 33, 254 pp. () = Dissertation, RWTH Aachen, 2017 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Generating Neural Network Connectivity from a Visual Representation
64 pp. () = Masterarbeit, Ruhr-Universität Bochum, 2017 OpenAccess  Download fulltext Files  Download fulltextFulltext Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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A scalable algorithm for simulating the structural plasticity of the brain
Journal of parallel and distributed computing 120, 251-266 () [10.1016/j.jpdc.2017.11.019]  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Full dynamic brain simulation using GATE in a high-performance computer
2017 IEEE Nuclear Science Symposium and Medical Imaging Conference, IEEE NPSS, Atlanta,Georgia,U.S.A.Atlanta,Georgia,U.S.A., U.S.A, 21 Oct 2017 - 28 Oct 20172017-10-212017-10-28 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Using structural plasticity to study the relationship between structure and function in the brain
SMHB General Assembly 2017, JülichJülich, Germany, 7 Nov 2017 - 8 Nov 20172017-11-072017-11-08 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Arbor: A morphologically detailed neural network simulator for modern high performance computer architectures
HBP summit 2017, GlasgowGlasgow, England, 17 Oct 2017 - 20 Oct 20172017-10-172017-10-20 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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NestMC: A morphologically detailed neural network simulator for modern high performance computer architectures
HBP student conference 2017, ViennaVienna, Austria, 8 Feb 2017 - 10 Feb 20172017-02-082017-02-10 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Arbor: A morphologically detailed neural network simulator for modern high performance computer architectures
Neuroscience 2017: Society for Neuroscience, Washington, DCWashington, DC, United States, 15 Nov 2017 - 15 Nov 20172017-11-152017-11-15 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Using structural plasticity to study the relationship between structure and function in the brain
HBP Summit 2017, GlasgowGlasgow, Scotland, 17 Oct 2017 - 20 Oct 20172017-10-172017-10-20 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Visual exploration and generation of connectivity in neural networks: bridging the gap between empirical data and theoretical model definition.
Bernstein Conference 2017, GöttingenGöttingen, Germany, 12 Sep 2017 - 15 Sep 20172017-09-122017-09-15 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Automatically generating HPC-optimized code for simulations using neural mass models
26th Computational Neuroscience Meeting, CNS 2017, AntwerpAntwerp, Belgium, 25 Jul 2017 - 25 Jul 20172017-07-252017-07-25 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Arbor: A morphologically detailed neural network simulator for modern high performance computer architectures
26th Computational Neuroscience Meeting, CNS 2017, University of AntwerpAntwerp, University of Antwerp, Belgium, 15 Jul 2017 - 20 Jul 20172017-07-152017-07-20 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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The NEST Dry-Run Mode: Efficient Dynamic Analysis of Neuronal Network Simulation Code
Frontiers in neuroinformatics 11, 40 () [10.3389/fninf.2017.00040] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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NestMC: A new multi-compartment neuronal network simulator
JUQUEEN Extreme Scaling Workshop 2017
Seminar, JülichJülich, Germany, 23 Jan 2017 - 25 Jan 20172017-01-232017-01-25
Jülich : Forschungszentrum Jülich Jülich Supercomputing Centre, JSC Internal Report FZJ-JSC-IB-2017-01, 31-36 () OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Pre-Commercial Procurement  of the Human Brain Project Completed
Innovatives Supercomputing in Deutschland 15(1), 27-28 () OpenAccess  Download fulltext Files  Download fulltextFulltext Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Constructing Neuronal Network Models in Massively Parallel Environments
Frontiers in neuroinformatics 11, 30 () [10.3389/fninf.2017.00030] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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A Collaborative Simulation-Analysis Workflow for Computational Neuroscience Using HPC
High-Performance Scientific Computing / Di Napoli, Edoardo (Editor) ; Cham : Springer International Publishing, 2017, Chapter 21 ; ISSN: 0302-9743=1611-3349 ; ISBN: 978-3-319-53861-7=978-3-319-53862-4 ; doi:10.1007/978-3-319-53862-4
Jülich Aachen Research Alliance (JARA) High-Performance Computing Symposium, JHPCS '16, AachenAachen, Germany, 4 Oct 2016 - 5 Oct 20162016-10-042016-10-05
Cham : Springer International Publishing, Lecture Notes in Computer Science 10164, 243 - 256 () [10.1007/978-3-319-53862-4_21]  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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NESTML: a modeling language for spiking neurons
Modellierung 2016, KarlsruheKarlsruhe, Germany, 17 Mar 2016 - 19 Mar 20162016-03-172016-03-19 Gesellschaft für Informatik e.V. (GI), Lecture Notes in Informatics (LNI) P-254, 93-108 ()  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Anatomy and Plasticity in Large-Scale Brain Models
Lausanne : Frontiers Media SA, Frontiers Research Topics 173 pp. () BibTeX | EndNote: XML, Text | RIS

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Editorial: Anatomy and Plasticity in Large-Scale Brain Models
Anatomy and Plasticity in Large-Scale Brain Models Lausanne : Frontiers Research Foundation () [10.3389/fnana.2016.00108] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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A Scalable Algorithm for Simulating the Structural Plasticity of the Brain
2016 28th International Symposium on Computer Architecture and High Performance Computing (SBAC-PAD), Los AngelesLos Angeles, CA, USA, 26 Oct 2016 - 28 Oct 20162016-10-262016-10-28 IEEE 1-8 () [10.1109/SBAC-PAD.2016.9]  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Including Gap Junctions into Distributed Neuronal Network Simulations
Brain-Inspired Computing / Amunts, Katrin (Editor) ; Cham : Springer International Publishing, 2016, Chapter 4 ; ISSN: 0302-9743=1611-3349 ; ISBN: 978-3-319-50861-0=978-3-319-50862-7 ; doi:10.1007/978-3-319-50862-7
International Workshop on Brain-Inspired Computing, BrainComp 2015, CetraroCetraro, Italy, 6 Jul 2015 - 10 Jul 20152015-07-062015-07-10
Cham : Springer International Publishing, Lecture Notes in Computer Science 10087, 43 - 57 () [10.1007/978-3-319-50862-7_4]  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Multiscale approach to explore the relationships between connectivity and function in whole brain simulations
Bernstein Conference 2016, BerlinBerlin, Germany, 21 Sep 2016 - 21 Sep 20162016-09-212016-09-21 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Nidus by NEST: A morphologically detailed neural network simulator for many core high performance computer architectures
Human Brain Project Summit 2016, FlorenceFlorence, Italy, 12 Oct 2016 - 15 Oct 20162016-10-122016-10-15 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Towards Large-Scale Fiber Orientation Models of the Brain – Automation and Parallelization of a Seeded Region Growing Segmentation of High-Resolution Brain Section Images
Brain-Inspired Computing
International Workshop on Brain-Inspired Computing, BrainComp 2015, CetraroCetraro, Italy, 6 Jul 2015 - 10 Jul 20152015-07-062015-07-10
Cham : Springer International Publishing, Lecture Notes in Computer Science 10087, 28 - 42 () [10.1007/978-3-319-50862-7_3]  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Human Brain Project: Towards a European infrastructure for brain research
Innovatives Supercomputing in Deutschland 14(2), 88-92 () OpenAccess  Download fulltext Files  Download fulltextFulltext Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Multiscale approach to explore the relationships between connectivity and function in whole brain simulations
HBP Summit 2016, FlorenceFlorence, Italy, 12 Oct 2016 - 14 Oct 20162016-10-122016-10-14 [10.12751/nncn.bc2016.0059] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Closed Loop Interactions between Spiking Neural Network and Robotic Simulators Based on MUSIC and ROS
Frontiers in neuroinformatics 10, 31 () [10.3389/fninf.2016.00031] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Automatic Generation of Connectivity for Large-Scale Neuronal Network Models through Structural Plasticity
Frontiers in neuroanatomy 10(57), 1662-5129 () [10.3389/fnana.2016.00057] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Estimating Fiber Orientation Distribution Functions in 3D-Polarized Light Imaging
Frontiers in neuroanatomy 10, 40 () [10.3389/fnana.2016.00040] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Integrating Visualizations into Modeling NEST Simulations
Frontiers in neuroinformatics 9, 29 () [10.3389/fninf.2015.00029] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Dissertation / PhD Thesis
Simulation technology for plastic neuronal networks on high-performance computers
188 pp. () [10.6094/UNIFR/10419] = Dissertation, Universität Freiburg, 2015 BibTeX | EndNote: XML, Text | RIS

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Supercomputing for Neuroscientists: How HPC can help your Neuroscience Projects
Innovatives Supercomputing in Deutschland 13(2), 83-84 () OpenAccess  Download fulltext Files  Download fulltextFulltext Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Preparatory Access to Computing and Support Resources at JSC
Innovatives Supercomputing in Deutschland 13(2), 9 () OpenAccess  Download fulltext Files  Download fulltextFulltext Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Cation Selectivity in Biological Cation Channels Using Experimental Structural Information and Statistical Mechanical Simulation
PLoS one 10(10), e0138679 - () [10.1371/journal.pone.0138679] OpenAccess  Download fulltext Files  Download fulltextFulltext Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Reconstruction of recurrent synaptic connectivity of thousands of neurons from simulated spiking activity
Journal of computational neuroscience 39(1), 77 - 103 () [10.1007/s10827-015-0565-5] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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A unified framework for spiking and gap-junction interactions in distributed neuronal network simulations
Frontiers in computational neuroscience 9(22), 00022 () [10.3389/fninf.2015.00022] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Modeling the I/O behavior of the NEST simulator using a proxy
Conference Proceedings of the YIC GACM 2015 / ed.: Stefanie Elgeti ; Jaan-Willem Simon
3rd ECCOMAS Young Investigators Conference, YIC GACM 2015, AachenAachen, Germany, 20 Jul 2015 - 23 Jul 20152015-07-202015-07-23
RWTh Aachen University 4 p. () OpenAccess  Download fulltext Files  Download fulltextFulltext Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Helmholtz Portfolio Theme "Supercomputing and Modelling for the Human Brain" − General Assembly 2015
Innovatives Supercomputing in Deutschland 13(1), 106-107 () OpenAccess  Download fulltext Files  Download fulltextFulltext Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Performance Evaluation of Scientific Applications on POWER8
High Performance Computing Systems. Performance Modeling, Benchmarking, and Simulation / ; Cham : Springer International Publishing, 2015, Chapter 2 ; ISSN: 0302-9743=1611-3349 ; ISBN: 978-3-319-17247-7=978-3-319-17248-4 ; doi:10.1007/978-3-319-17248-4
5th International Workshop on Performance Modeling, Benchmarking and Simulation of High Performance Computer Systems (held as part of SC14), PMBS 2014, New Orleans, LANew Orleans, LA, USA, 16 Nov 2014 - 16 Nov 20142014-11-162014-11-16
Cham : Springer International Publishing, Lecture Notes in Computer Science 8966, 24 - 45 () [10.1007/978-3-319-17248-4_2] BibTeX | EndNote: XML, Text | RIS

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Effect of Alzheimer disease on the dynamical and computational characteristics of recurrent neural networks
11th Göttingen Meeting of the German Neuroscience Society, GöttingenGöttingen, Germany, 18 Mar 2015 - 28 Mar 20152015-03-182015-03-28 BibTeX | EndNote: XML, Text | RIS

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Supercomputing Infrastructure for Simulations of the Human Brain
Brain-inspired computing : international workshop, BrainComp 2013, Cetraro, Italy, July 8 - 11, 2013 ; revised selected papers / Grandinetti, Lucio ; Lippert, Thomas ; Petkov, Nicolai , Cham [u.a.] : Springer, 2014,
Brain-Inspired Computing, International Workshop, BrainComp 2013, BrainComp 2013, CetraroCetraro, Italy, 8 Jul 2013 - 11 Jul 20132013-07-082013-07-11
Cham [u.a.] : Springer, Lecture notes in computer science 8603, 198 - 212 () [10.1007/978-3-319-12084-3] BibTeX | EndNote: XML, Text | RIS

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Interplay of connectivity and dynamics in recurrent neuronal networks
122 p. () = Dissertation, Albert-Ludwigs-Universität Freiburg im Breisgau, 2014 BibTeX | EndNote: XML, Text | RIS

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Performance Model for Large-Scale Neural Simulations with NEST
Supercomputing 2014, SC14, New OrleansNew Orleans, USA, 16 Nov 2014 - 21 Nov 20142014-11-162014-11-21   Download fulltextFulltext BibTeX | EndNote: XML, Text | RIS

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"Bernstein Network – Simulation Lab Neuroscience" HPC Workshop
Innovatives Supercomputing in Deutschland 12(2), 93-94 () OpenAccess  Download fulltext Files  Download fulltextFulltext Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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JSC Guest Student Programme 2014 – Experience Scientific Computing
Innovatives Supercomputing in Deutschland 12(2), 86-87 () OpenAccess  Download fulltext Files  Download fulltextFulltext Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Spiking network simulation code for petascale computers
Frontiers in neuroinformatics 8, 78 () [10.3389/fninf.2014.00078] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Simulating structural plasticity of large scale networks in NEST
Twenty Third Annual Computational Neuroscience Meeting, CNS*2014, Quebec CityQuebec City, Canada, 26 Jul 2014 - 31 Jul 20142014-07-262014-07-31 OpenAccess  Download fulltext Files  Download fulltextFulltext Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Domain and Interdomain Energetics Underlying Gating in Shaker-Type Kv Channels
Biophysical journal 107(8), 1841 - 1852 () [10.1016/j.bpj.2014.08.015]  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Homeostatic structural plasticity can account for topology changes following deafferentation and focal stroke
Frontiers in neuroanatomy 8, 115 () [10.3389/fnana.2014.00115] special issue: "Quantitative analysis of neuroanatomy" OpenAccess  Download fulltext Files  Download fulltextFulltext Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Integrating brain structure and dynamics on supercomputers
Brain-inspired Computing
1st International Workshop on Brain-inspired Computing, BrainComp 2013, CetraroCetraro, Italy, 8 Jul 2013 - 11 Jul 20132013-07-082013-07-11
Cham Heidelberg New York Dordrecht London : Springer, Lecture Notes in Computer Science 8603, 22-32 () [10.1007/978-3-319-12084-3_3] BibTeX | EndNote: XML, Text | RIS

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Open Dialogue on Pre-Commercial Procurement of Innovative HPC Technology
Innovatives Supercomputing in Deutschland 12(1), 94.95 () OpenAccess  Download fulltext Files  Download fulltextFulltext Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Homeostatic structural plasticity increases the efficiency of small-world networks
Frontiers in synaptic neuroscience 6(7), 14 () [10.3389/fnsyn.2014.00007] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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CyNEST: a maintainable Cython-based interface for the NEST simulator
Frontiers in neuroinformatics 8, 23 () [10.3389/fninf.2014.00023] special issue: "Python in Neuroscience II" OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Hybrid parallelization of a seeded region growing segmentation of brain images for a GPU cluster
ARCS 2014: 27th International Conference on Architecture of Computing Systems - Workshop Proceedings
27th International Conference on Architecture of Computing Systems, ARCS2014, LübeckLübeck, Germany, 25 Feb 2014 - 28 Feb 20142014-02-252014-02-28
Berlin : VDE Verlag 190 pp. () OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Paving the Road towards Pre-Exascale Supercomputing
NIC Symposium 2014 - Proceedings
NIC Symposium 2014, JülichJülich, Germany, 12 Feb 2014 - 13 Feb 20142014-02-122014-02-13
Jülich : John von Neumann Institute for Computing, NIC Series 47, 1-14 () OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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20 years of NEST: a mature brain simulator
INM Retreat 2013, JülichJülich, Germany, 2 Jul 2013 - 3 Jul 20132013-07-022013-07-03 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Neural system prediction and identification challenge
Frontiers in neuroinformatics 7(43), 1-10 () [10.3389/fninf.2013.00043] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Relating Polarized Light Imaging Data Across Scales
Imaging the brain at different scales: How to integrate multi-scale structural information?, AntwerpAntwerp, Belgium, 2 Sep 2013 - 6 Sep 20132013-09-022013-09-06 Frontiers in neuroinformatics 7, 3 () [10.3389/conf.fninf.2013.10.00029] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Relating PLI Data Across Scales
Imaging the brain at different scales: How to integrate multi-scale structural information?, AntwerpAntwerp, Belgium, 2 Sep 2013 - 6 Sep 20132013-09-022013-09-06 OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Jülich Supercomputing Centre contributes to visionary "Human Brain Project"
Innovatives Supercomputing in Deutschland 11(2), 108-109 () OpenAccess  Download fulltext Files  Download fulltextFulltext Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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JSC Guest Student Programme on Scientific Computing 2013
Innovatives Supercomputing in Deutschland 11(2), 104-105 () OpenAccess  Download fulltext Files  Download fulltextFulltext Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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A Simple Rule for Dendritic Spine and Axonal Bouton Formation Can Account for Cortical Reorganization after Focal Retinal Lesions
PLoS Computational Biology 9(10), e1003259 () [10.1371/journal.pcbi.1003259] OpenAccess  Download fulltext Files  Download fulltextFulltext Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Effect of Alzheimer's disease on the dynamical and computational characteristics of recurrent neural networks
Twenty Second Annual Computational Neuroscience Meeting: CNS*2013, ParisParis, France, 13 Jul 2013 - 18 Jul 20132013-07-132013-07-18 14(Suppl 1), 282 pp. () [10.1186/1471-2202-14-S1-P282] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Effect of Alzheimer’s disease on the dynamical and computational characteristics of recurrent neural networks
22nd Annual Computational Neuroscience Meeting, CNS*2013, ParisParis, France, 13 Jul 2013 - 18 Jul 20132013-07-132013-07-18 14(Suppl 1), P282 ()   Download fulltextFulltext BibTeX | EndNote: XML, Text | RIS

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Effect of Alzheimer’s disease on the dynamical and computational characteristics of recurrent neural networks
22nd Annual Computational Neuroscience Meeting, CNS*2013, ParisParis, France, 13 Jul 2013 - 18 Jul 20132013-07-132013-07-18   Download fulltextFulltext BibTeX | EndNote: XML, Text | RIS

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From laptops to supercomputers: a single highly scalable code base for spiking neuronal network simulations
Annual CNS Meeting 2013, ParisParis, France, 13 Jul 2013 - 18 Jul 20132013-07-132013-07-18 BMC neuroscience 14(Suppl 1), P163 - () [10.1186/1471-2202-14-S1-P163] OpenAccess  Download fulltext Files  Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Supercomputers ready for use as discovery machines for neuroscience
Proceedings of the 10th Meeting of the German Neuroscience Society
10th Meeting of the German Neuroscience Society, NWG 2013, GoettingenGoettingen, Germany, 13 Mar 2013 - 16 Mar 20132013-03-132013-03-16
T26-8B ()   Download fulltextFulltext BibTeX | EndNote: XML, Text | RIS

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Supercomputers ready for use as discovery machines for neuroscience
10th Meeting of the German Neuroscience Society, NWG 2013, GoettingenGoettingen, Germany, 13 Mar 2013 - 18 Mar 20132013-03-132013-03-18 BibTeX | EndNote: XML, Text | RIS

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Estimation of fiber orientation distribution functions in 3D-polarized light imaging
19th Annual Meeting of the Organization for Human Brain Mapping, SeattleSeattle, USA, 16 Jun 2013 - 20 Jun 20132013-06-162013-06-20 BibTeX | EndNote: XML, Text | RIS

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Simulation Lab Neuroscience launched
Innovatives Supercomputing in Deutschland 11(1), 100-101 () OpenAccess  Download fulltext Files  Download fulltextFulltext Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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Increasing quality and managing complexity in neuroinformatics software development with continuous integration.
Frontiers in neuroinformatics 6(31), 1-16 () [10.3389/fninf.2012.00031] OpenAccess  Download fulltext Files  Download fulltextFulltext Download fulltextFulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

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