http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Lu, H. (Corresponding author) ; Diaz, S.FZJ* ; Lenz, M. ; Vlachos, A. (Corresponding author)
Interplay between homeostatic synaptic scaling and homeostatic structural plasticity maintains the robust firing rate of neural networks
eLife 12, RP88376 (2025) [10.7554/eLife.88376.1]2025   Files  Fulltext BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Geminiani, A. (Corresponding author) ; Kathrein, J. ; Yegenoglu, A. ; Vogel, F. ; Armendariz, M. ; Ben-Zion, Z. ; Bogdan, P. A. ; Covelo, J. ; Diaz Pier, M.FZJ* ; Grasenick, K. ; Karasenko, V. ; Klijn, W.FZJ* ; Kokan, T. ; Lupascu, C. A. ; Lührs, A.FZJ* ; Mahfoud, T. ; Özden, T. ; Pedersen, J. E. ; Peres, L. ; Reiten, I. ; Simidjievski, N. ; Ulnicane, I. ; van der Vlag, M.FZJ* ; Zehl, L.FZJ* ; Saria, A. (Last author) ; Diaz-Pier, S. (Last author)FZJ* ; Passecker, J. (Corresponding author)
Interdisciplinary and Collaborative Training in Neuroscience: Insights from the Human Brain Project Education Programme
Neuroinformatics 22(4), 657 - 678 (2024) [10.1007/s12021-024-09682-6]2024   Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Diaz-Pier, S. (Corresponding author)FZJ* ; Carloni, P.FZJ*
Impact of quantum and neuromorphic computing on biomolecular simulations: Current status and perspectives
Current opinion in structural biology 87, 102817 (2024) [10.1016/j.sbi.2024.102817]2024   Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Kusch, L. (Corresponding author) ; Diaz, S.FZJ* ; Klijn, W.FZJ* ; Sontheimer, K.FZJ* ; Bernard, C. ; Morrison, A.FZJ* ; Jirsa, V. (Corresponding author)
Multiscale co-simulation design pattern for neuroscience applications
Frontiers in neuroinformatics 18, 1156683 (2024) [10.3389/fninf.2024.1156683]2024   Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article van der Vlag, M. (Corresponding author)FZJ* ; Kusch, L. ; Destexhe, A. ; Jirsa, V. ; Diaz, S.FZJ* ; Goldman, J. S.
Vast Parameter Space Exploration of the Virtual Brain: A Modular Framework for Accelerating the Multi-Scale Simulation of Human Brain Dynamics
Applied Sciences 14(5), 2211 (2024) [10.3390/app14052211]2024   Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Jimenez-Romero, C.FZJ* ; Yegenoglu, A. (Corresponding author)FZJ* ; Pérez Martín, A.FZJ* ; Diaz, S.FZJ* ; Morrison, A.FZJ*
Emergent communication enhances foraging behavior in evolved swarms controlled by spiking neural networks
Swarm intelligence 18, 1-28 (2024) [10.1007/s11721-023-00231-6]2024   Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Manos, T. (Corresponding author) ; Diaz, S.FZJ* ; Fortel, I. ; Driscoll, I. ; Zhan, L. ; Leow, A.
Enhanced simulations of whole-brain dynamics using hybrid resting-state structural connectomes
Frontiers in computational neuroscience 17, 1295395 (2023) [10.3389/fncom.2023.1295395]2023   Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Yegenoglu, A. (Corresponding author)FZJ* ; Subramoney, A. ; Hater, T.FZJ* ; Jimenez-Romero, C.FZJ* ; Klijn, W.FZJ* ; Pérez Martín, A.FZJ* ; van der Vlag, M.FZJ* ; Herty, M. ; Morrison, A.FZJ* ; Diaz, S.FZJ*
Exploring Parameter and Hyper-Parameter Spaces of Neuroscience Models on High Performance Computers With Learning to Learn
Frontiers in computational neuroscience 16, 885207 (2022) [10.3389/fncom.2022.885207]2022   Files  Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article van der Vlag, M. (Corresponding author)FZJ* ; Woodman, M.AMU* ; Fousek, J.AMU* ; Diaz, S.FZJ* ; Pérez Martín, A.FZJ* ; Jirsa , V.AMU* ; Morrison, A.FZJ*
RateML: A Code Generation Tool for Brain Network Models
Frontiers in network physiology 2, 826345 (2022) [10.3389/fnetp.2022.826345]2022   Files  Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Pieperhoff, P. (Corresponding author)FZJ* ; Südmeyer, M. ; Dinkelbach, L. ; Hartmann, C. J. ; Ferrea, S. ; Moldovan, A. S. ; Minnerop, M.FZJ* ; Diaz-Pier, S.FZJ* ; Schnitzler, A. ; Amunts, K.FZJ*
Regional changes of brain structure during progression of idiopathic Parkinson's disease – A longitudinal study using deformation based morphometry
Cortex 151, 188 - 210 (2022) [10.1016/j.cortex.2022.03.009]2022   Files  Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Schirner, M. (Corresponding author) ; Domide, L. ; Perdikis, D. ; Triebkorn, P. ; Stefanovski, L. ; Pai, R. ; Prodan, P. ; Valean, B. ; Palmer, J. ; Langford, C. ; Blickensdörfer, A. ; van der Vlag, M.FZJ* ; Diaz-Pier, S.FZJ* ; Peyser, A.FZJ* ; Klijn, W.FZJ* ; Pleiter, D.FZJ* ; Nahm, A.FZJ* ; Schmid, O. ; Woodman, M. ; Zehl, L.FZJ* ; Fousek, J. ; Petkoski, S. ; Kusch, L. ; Hashemi, M. ; Marinazzo, D. ; Mangin, J.-F. ; Flöel, A. ; Akintoye, S. ; Stahl, B. C. ; Cepic, M. ; Johnson, E. ; Deco, G. ; McIntosh, A. R. ; Hilgetag, C. C. ; Morgan, M. ; Schuller, B.FZJ* ; Upton, A. ; McMurtrie, C. ; Dickscheid, T.FZJ* ; Bjaalie, J. G. ; Amunts, K.FZJ* ; Mersmann, J. ; Jirsa, V. ; Ritter, P.
Brain simulation as a cloud service: The Virtual Brain on EBRAINS
NeuroImage 251, 118973 - (2022) [10.1016/j.neuroimage.2022.118973]2022   Files  Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Herbers, P.FZJ* ; Calvo, I. ; Diaz, S. (Corresponding author)FZJ* ; Robles Sanchez, O. D. ; Mata, S. ; Toharia, P. ; Pastor, L. ; Peyser, A.FZJ* ; Morrison, A.FZJ* ; Klijn, W. (Corresponding author)FZJ*
ConGen a simulator-agnostic visual language for definition and generation of connectivity in large and multiscale neural networks
Frontiers in neuroinformatics 15, 766697 (2022) [10.3389/fninf.2021.766697] special issue: "Neuroscience, Computing, Performance, and Benchmarks: Why It Matters to Neuroscience How Fast We Can Compute"2022   Files  Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Manos, T. (Corresponding author) ; Diaz, S. (Corresponding author)FZJ* ; Tass, P. A.
Long-Term Desynchronization by Coordinated Reset Stimulation in a Neural Network Model With Synaptic and Structural Plasticity
Frontiers in physiology 12, 716556 (2021) [10.3389/fphys.2021.716556]2021   Files  Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Hashemi, M. (Corresponding author) ; Vattikonda, A. N. ; Sip, V. ; Diaz-Pier, S.FZJ* ; Peyser, A.FZJ* ; Wang, H. ; Guye, M. ; Bartolomei, F. ; Woodman, M. M. ; Jirsa, V. K. (Corresponding author)
On the influence of prior information evaluated by fully Bayesian criteria in a personalized whole-brain model of epilepsy spread
PLoS Computational Biology 17(7), e1009129 - (2021) [10.1371/journal.pcbi.1009129]2021   Files  Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Book/Dissertation / PhD Thesis Diaz, S. (Corresponding author)FZJ*
Structural plasticity as a connectivity generation and optimization algorithm in neural networks
Jülich : Forschungszentrum Jülich GmbH Zentralbibliothek, Verlag, Schriften des Forschungszentrums Jülich IAS Series 47, 167 pp. (2021)2021 = Dissertation, RWTH Aachen University, 2021   Files  Fulltext by OpenAccess repository Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Contribution to a conference proceedings/Contribution to a book Yegenoglu, A. (Corresponding author)FZJ* ; Krajsek, K.FZJ* ; Diaz, S.FZJ* ; Herty, M.
Ensemble Kalman Filter Optimizing Deep Neural Networks: An Alternative Approach to Non-performing Gradient Descent
2020Machine Learning, Optimization, and Data Science
The Sixth International Conference on Machine Learning, Optimization, and Data Science, LOD2020, SienaSiena, Italy, 19 Jul 2020 - 22 Jul 20202020-07-192020-07-22 Cham : Springer, Lecture Notes in Computer Science 12566, : 5th ed., 78-92 (2020) [10.1007/978-3-030-64580-9_7]2020   Files  Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Contribution to a conference proceedings Klijn, W. (Corresponding author)FZJ* ; Diaz, S.FZJ* ; Morrison, A.FZJ* ; Peyser, A.FZJ*
Staged deployment of interactive multi-application HPC workflows
2020The 2019 International Conference on High Performance Computing & Simulation, HPCS 2019, DublinDublin, Ireland, 15 Jul 2019 - 19 Jul 20192019-07-152019-07-19 IEEE 305-311 (2020) [10.1109/HPCS48598.2019.9188104]2020   Files  Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Peyser, A. (Corresponding author)FZJ* ; Diaz, S.FZJ* ; Klijn, W.FZJ* ; Morrison, A.FZJ* ; Triesch, J.
Editorial: Linking experimental and computational connectomics
Network neuroscience 3(4), 902-904 (2019) [10.1162/netn_e_00108]2019   Files  Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Blundell, I.FZJ* ; Brette, R. ; Cleland, T. A. ; Close, T. G. ; Coca, D. ; Davison, A. P. ; Diaz, S.FZJ* ; Fernandez Musoles, C. ; Gleeson, P. ; Goodman, D. F. M. ; Hines, M. ; Hopkins, M. W. ; Kumbhar, P. ; Lester, D. R. ; Marin, B. ; Morrison, A.FZJ* ; Müller, E. ; Nowotny, T. ; Peyser, A.FZJ* ; Plotnikov, D.FZJ* ; Richmond, P. ; Rowley, A. ; Rumpe, B. ; Stimberg, M. ; Stokes, A. B. ; Tomkins, A. ; Trensch, G.FZJ* ; Woodman, M. ; Eppler, J. M. (Corresponding author)FZJ*
Code Generation in Computational Neuroscience: A Review of Tools and Techniques
Frontiers in neuroinformatics 12, 68 (2018) [10.3389/fninf.2018.00068]2018   Files  Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Nowke, C. (Corresponding author) ; Diaz, S.FZJ* ; Weyers, B. ; Hentschel, B. ; Morrison, A.FZJ* ; Kuhlen, T. W. ; Peyser, A.FZJ*
Toward Rigorous Parameterization of Underconstrained Neural Network Models Through Interactive Visualization and Steering of Connectivity Generation
Frontiers in neuroinformatics 12, 32 (2018) [10.3389/fninf.2018.00032]2018   Files  Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Diaz, S. (Corresponding author)FZJ* ; Naveau, M. ; Butz-Ostendorf, M. ; Morrison, A.FZJ*
Automatic Generation of Connectivity for Large-Scale Neuronal Network Models through Structural Plasticity
Frontiers in neuroanatomy 10(57), 1662-5129 (2016) [10.3389/fnana.2016.00057]2016   Files  Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS