Publikationen

Journal Article Leitner, D. (Corresponding author)FZJ* ; Schnepf, A.FZJ* ; Vanderborght, J.FZJ*
From hydraulic root architecture models to efficient macroscopic sink terms including perirhizal resistance: quantifying accuracy and computational speed
Hydrology and earth system sciences 29(6), 1759 - 1782 (2025) [10.5194/hess-29-1759-2025]2025 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Sircan, A. (Corresponding author)FZJ* ; Streck, T. ; Schnepf, A.FZJ* ; Giraud, M.FZJ* ; Lattacher, A. ; Kandeler, E. ; Poll, C. ; Pagel, H.FZJ*
Trait-based modeling of microbial interactions and carbon turnover in the rhizosphere
Soil biology & biochemistry 202, 109698 - (2025) [10.1016/j.soilbio.2024.109698]2025 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Fichtl, L. (Corresponding author) ; Leitner, D.FZJ* ; Schnepf, A.FZJ* ; Schmidt, D. ; Kahlen, K. ; Friedel, M.
A Field-to-Parameter Pipeline for Analyzing and Simulating Root System Architecture of Woody Perennials: Application to Grapevine Rootstocks
Plant phenomics 6, 0280 (2024) [10.34133/plantphenomics.0280]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Nguyen, T. H. (Corresponding author) ; Gaiser, T. ; Vanderborght, J.FZJ* ; Schnepf, A.FZJ* ; Bauer, F.FZJ* ; Klotzsche, A.FZJ* ; Lärm, L.FZJ* ; Hüging, H. ; Ewert, F.
Responses of field-grown maize to different soil types, water regimes, and contrasting vapor pressure deficit
Biogeosciences 21(23), 5495 - 5515 (2024) [10.5194/bg-21-5495-2024]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article - Online First Bauer, F. M.FZJ* ; Baker, D. N.FZJ* ; Giraud, M.FZJ* ; Baca Cabrera, J. C.FZJ* ; Vanderborght, J.FZJ* ; Lobet, G. ; Schnepf, A.FZJ*
Root System Architecture Reorganization Under Decreasing Soil Phosphorus Lowers Root System Conductance of Zea mays
Annals of botany 0, mcae198 (2024) [10.1093/aob/mcae198]2024 BibTeX | EndNote: XML, Text | RIS

Journal Article - Online First Wacker, T. S. (Corresponding author) ; van der Bom, F. ; Delory, B. M. ; Vetterlein, D. ; Postma, J. A.FZJ* ; Nagel, K. A.FZJ* ; Schnepf, A.FZJ* ; Dresbøll, D. B.
Back to the roots: standardizing root length density terminology
Plant and soil -, - (2024) [10.1007/s11104-024-07075-x]2024 BibTeX | EndNote: XML, Text | RIS

Journal Article Nguyen, T. H. (Corresponding author)Extern* ; Lopez, G. ; Seidel, S. J. ; Lärm, L.FZJ* ; Bauer, F. M.FZJ* ; Klotzsche, A.FZJ* ; Schnepf, A.FZJ* ; Gaiser, T. ; Hüging, H. ; Ewert, F.
Multi-year aboveground data of minirhizotron facilities in Selhausen
Scientific data 11(1), 674 (2024) [10.1038/s41597-024-03535-2]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Vanderborght, J. (Corresponding author)FZJ* ; Couvreur, V. ; Javaux, M.FZJ* ; Leitner, D.FZJ* ; Schnepf, A.FZJ* ; Vereecken, H.FZJ*
Mechanistically derived macroscopic root water uptake functions: The α and ω of root water uptake functions
Vadose zone journal 23(4), e20333 (2024) [10.1002/vzj2.20333]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Vogel, H.-J. (Corresponding author) ; Amelung, W.FZJ* ; Baum, C. ; Bonkowski, M. ; Blagodatsky, S. ; Grosch, R. ; Herbst, M.FZJ* ; Kiese, R. ; Koch, S. ; Kuhwald, M. ; König, S. ; Leinweber, P. ; Lennartz, B. ; Müller, C. W. ; Pagel, H.FZJ* ; Rillig, M. C. ; Rüschhoff, J. ; Russell, D. ; Schnepf, A.FZJ* ; Schulz, S. ; Siebers, N.FZJ* ; Vetterlein, D. ; Wachendorf, C. ; Weller, U. ; Wollschläger, U.
How to adequately represent biological processes in modeling multifunctionality of arable soils
Biology and fertility of soils 60(3), 263 - 306 (2024) [10.1007/s00374-024-01802-3]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article George, T. S. ; Bulgarelli, D. ; Carminati, A. ; Chen, Y. ; Jones, D. ; Kuzyakov, Y. ; Schnepf, A.FZJ* ; Wissuwa, M. ; Roose, T. (Corresponding author)
Bottom-up perspective – The role of roots and rhizosphere in climate change adaptation and mitigation in agroecosystems
Plant and soil 500, 297-323 (2024) [10.1007/s11104-024-06626-6]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Bauke, S. L. (Corresponding author) ; Seidel, S. J. ; Athmann, M. ; Berns, A. E.FZJ* ; Braun, M. ; Gocke, M. I. ; Guigue, J. ; Kautz, T. ; Kögel-Knabner, I. ; Ohan, J. ; Rillig, M. ; Schloter, M. ; Schmittmann, O. ; Schulz, S. ; Uhlig, D.FZJ* ; Schnepf, A.FZJ* ; Amelung, W.FZJ*
Short-term effects of subsoil management by strip-wise loosening and incorporation of organic material
Soil & tillage research 236, 105936 (2024) [10.1016/j.still.2023.105936]2024 Embargoed OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Helmrich, D. N.FZJ* ; Bauer, F. M.FZJ* ; Giraud, M.FZJ* ; Schnepf, A. (Corresponding author)FZJ* ; Göbbert, J. H.FZJ* ; Scharr, H.FZJ* ; Hvannberg, E. Þ. ; Riedel, M.FZJ*
A scalable pipeline to create synthetic datasets from functional–structural plant models for deep learning
In silico plants 6(1), diad022 (2024) [10.1093/insilicoplants/diad022]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Lärm, L. (Corresponding author)FZJ* ; Bauer, F.FZJ* ; van der Kruk, J.FZJ* ; Vanderborght, J.FZJ* ; Morandage, S. ; Vereecken, H.FZJ* ; Schnepf, A.FZJ* ; Klotzsche, A. (Last author)FZJ*
Linking horizontal crosshole GPR variability with root image information for maize crops
Vadose zone journal 23(1), e20293 (2024) [10.1002/vzj2.20293]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Vanderborght, J. (Corresponding author)FZJ* ; Leitner, D.FZJ* ; Schnepf, A.FZJ* ; Couvreur, V. ; Vereecken, H.FZJ* ; Javaux, M.FZJ*
Combining root and soil hydraulics in macroscopic representations of root water uptake
Vadose zone journal 23(3), e20273 (2024) [10.1002/vzj2.20273]2024 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Lärm, L. (Corresponding author)FZJ* ; Bauer, F. M. (Corresponding author)FZJ* ; Hermes, N.FZJ* ; van der Kruk, J.FZJ* ; Vereecken, H.FZJ* ; Vanderborght, J.FZJ* ; Nguyen, T. H. ; Lopez, G. ; Seidel, S. J. ; Ewert, F. ; Schnepf, A.FZJ* ; Klotzsche, A. (Last author)FZJ*
Multi-year belowground data of minirhizotron facilities in Selhausen
Scientific data 10(1), 672 (2023) [10.1038/s41597-023-02570-9]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Giraud, M. (Corresponding author)FZJ* ; Le Gall, S.FZJ* ; Harings, M.FZJ* ; Javaux, M.FZJ* ; Leitner, D.FZJ* ; Meunier, F.FZJ* ; Rothfuss, Y.FZJ* ; van Dusschoten, D.FZJ* ; Vanderborght, J.FZJ* ; Vereecken, H.FZJ* ; Lobet, G.FZJ* ; Schnepf, A.FZJ*
CPlantBox: a fully coupled modelling platform for the water and carbon fluxes in the soil–plant–atmosphere continuum
In silico plants 5(2), diad009 (2023) [10.1093/insilicoplants/diad009]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Zhou, X.FZJ* ; Schnepf, A.FZJ* ; Vanderborght, J.FZJ* ; Leitner, D.FZJ* ; Vereecken, H.FZJ* ; Lobet, G. (Corresponding author)FZJ*
Phloem anatomy restricts root system architecture development: theoretical clues from in silico experiments
In silico plants 5(2), diad012 (2023) [10.1093/insilicoplants/diad012]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Schnepf, A. (Corresponding author)FZJ* ; Black, C. K. ; Couvreur, V. ; Delory, B. M. ; Doussan, C. ; Heymans, A. ; Javaux, M.FZJ* ; Khare, D.FZJ* ; Koch, A. ; Koch, T. ; Kuppe, C. W.FZJ* ; Landl, M.FZJ* ; Leitner, D.FZJ* ; Lobet, G.FZJ* ; Meunier, F. ; Postma, J. A.FZJ* ; Schäfer, E. D. ; Selzner, T.FZJ* ; Vanderborght, J.FZJ* ; Vereecken, H.FZJ*
Collaborative benchmarking of functional-structural root architecture models: Quantitative comparison of simulated root water uptake
In silico plants 5(1), diad005 (2023) [10.1093/insilicoplants/diad005]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Selzner, T. (Corresponding author)FZJ* ; Horn, J. ; Landl, M.FZJ* ; Pohlmeier, A.FZJ* ; Helmrich, D.FZJ* ; Huber, K. ; Vanderborght, J.FZJ* ; Vereecken, H.FZJ* ; Behnke, S. ; Schnepf, A.FZJ*
3D U-Net Segmentation Improves Root System Reconstruction from 3D MRI Images in Automated and Manual Virtual Reality Work Flows
Plant phenomics 5, 0076 (2023) [10.34133/plantphenomics.0076]2023 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Espinoza, G. M. L. (Corresponding author) ; Ahmadi, S. H. ; Amelung, W.FZJ* ; Athmann, M. ; Ewert, F. ; Gaiser, T. ; Gocke, M. ; Kautz, T. ; Postma, J. A.FZJ* ; Rachmilevitch, S. ; Schaaf, G. ; Schnepf, A.FZJ* ; Stoschus, A. ; Watt, M. ; Peng, Y.FZJ* ; Seidel, S.
Nutrient deficiency effects on root architecture and root-to-shoot ratio in arable crops
Frontiers in plant science 13, 1067498 (2023) [10.3389/fpls.2022.1067498]2023 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Vetterlein, D. ; Carminati, A. ; Schnepf, A.FZJ*
Special issue: Rhizosphere spatiotemporal organisation: an integrated approach linking above and belowground
Plant and soil 478(1-2), 1 - 4 (2022) [10.1007/s11104-022-05716-7]2022 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Bauke, S. L. (Corresponding author) ; Amelung, W.FZJ* ; Bol, R.FZJ* ; Brandt, L. ; Brüggemann, N.FZJ* ; Kandeler, E. ; Meyer, N. ; Or, D. ; Schnepf, A.FZJ* ; Schloter, M. ; Schulz, S. ; Siebers, N.FZJ* ; von Sperber, C. ; Vereecken, H.FZJ*
Soil water status shapes nutrient cycling in agroecosystems from micrometer to landscape scales
Journal of plant nutrition and soil science 185(6), 773 - 792 (2022) [10.1002/jpln.202200357]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Morandage, S. ; Schnepf, A.FZJ* ; Leitner, D.FZJ* ; Javaux, M.FZJ* ; Vereecken, H.FZJ* ; Vanderborght, J.FZJ*
Correction to: Parameter sensitivity analysis of a root system architecture model based on virtual field sampling
Plant and soil 477(1-2), 849 - 850 (2022) [10.1007/s11104-021-05089-3]2022 Files BibTeX | EndNote: XML, Text | RIS

Journal Article Bauer, F. M. (Corresponding author)FZJ* ; Lärm, L.FZJ* ; Morandage, S. ; Lobet, G.FZJ* ; Vanderborght, J.FZJ* ; Vereecken, H.FZJ* ; Schnepf, A.FZJ*
Development and Validation of a Deep Learning Based Automated Minirhizotron Image Analysis Pipeline
Plant phenomics 2022, 1 - 14 (2022) [10.34133/2022/9758532]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Schnepf, A. (Corresponding author)FZJ* ; Leitner, D.FZJ* ; Bodner, G. ; Javaux, M.FZJ*
Editorial: Benchmarking 3D-Models of Root Growth, Architecture and Functioning
Frontiers in plant science 13, 902587 (2022) [10.3389/fpls.2022.902587]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Seidel, S. J. (Corresponding author) ; Gaiser, T. ; Srivastava, A. K. ; Leitner, D.FZJ* ; Schmittmann, O. ; Athmann, M. ; Kautz, T. ; Guigue, J. ; Ewert, F. ; Schnepf, A.FZJ*
Simulating Root Growth as a Function of Soil Strength and Yield With a Field-Scale Crop Model Coupled With a 3D Architectural Root Model
Frontiers in plant science 13, 865188 (2022) [10.3389/fpls.2022.865188]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Phalempin, M. (Corresponding author) ; Landl, M.FZJ* ; Wu, G.-M. ; Schnepf, A.FZJ* ; Vetterlein, D. ; Schlüter, S.
Maize root-induced biopores do not influence root growth of subsequently grown maize plants in well aerated, fertilized and repacked soil columns
Soil & tillage research 221, 105398 - (2022) [10.1016/j.still.2022.105398]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Kuppe, C. W. (Corresponding author)FZJ* ; Schnepf, A.FZJ* ; von Lieres, E.FZJ* ; Watt, M. ; Postma, J. A.FZJ*
Rhizosphere models: their concepts and application to plant-soil ecosystems
Plant and soil 474(1-2), 17 - 55 (2022) [10.1007/s11104-021-05201-7]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Khare, D. (Corresponding author)FZJ* ; Selzner, T. (Corresponding author)FZJ* ; Leitner, D.FZJ* ; Vanderborght, J.FZJ* ; Vereecken, H.FZJ* ; Schnepf, A.FZJ*
Root System Scale Models Significantly Overestimate Root Water Uptake at Drying Soil Conditions
Frontiers in Functional Plant Ecology 13, 798741 (2022) [10.3389/fpls.2022.798741]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Schnepf, A. (Corresponding author)FZJ* ; Carminati, A. ; Ahmed, M. A. ; Ani, M. ; Benard, P. ; Bentz, J.FZJ* ; Bonkowski, M. ; Knott, M. ; Diehl, D. ; Duddek, P. ; Kröner, E.FZJ* ; Javaux, M.FZJ* ; Landl, M.FZJ* ; Lehndorff, E. ; Lippold, E. ; Lieu, A. ; Mueller, C. W. ; Oburger, E. ; Otten, W. ; Portell, X. ; Phalempin, M. ; Prechtel, A. ; Schulz, R. ; Vanderborght, J.FZJ* ; Vetterlein, D.
Linking rhizosphere processes across scales: Opinion
Plant and soil 478, 5-42 (2022) [10.1007/s11104-022-05306-7]2022 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Beroueg, A. ; Buck-Sorlin, G. ; Couvreur, V. ; Danjon, F. ; Delory, B. M. ; Doussan, C. ; Swaef, T. D. ; Draye, X. ; Jean-Louis Drouet ; Dupuy, L. ; Garre, S. ; Gérard, F. ; Heymans, A. ; Hinsinger, P. ; Javaux, M.FZJ* ; Koch, A. ; Landl, M.FZJ* ; Lecompte, F. ; Lobet, G. (Corresponding author)FZJ* ; Lynch, J. ; Martre, P. ; Meredieu, C. ; Meunier, F. ; Mollier, A. ; Nguyen, C. ; Picon-Cochard, C. ; Postma, J. A.FZJ* ; Pradal, C. ; Rees, F. ; Richard-Molard, C. ; Roose, T. ; Saint-Cast, C. ; Schnepf, A.FZJ* ; Thaler, P. ; Vanderborght, J.FZJ* ; Wu, L. ; Zhou, X.FZJ*
Loïc Pagès, founding scientist in root ecology and modelling
In silico plants 3(2), diab035 (2021) [10.1093/insilicoplants/diab035]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Vanderborght, J. (Corresponding author)FZJ* ; Couvreur, V. ; Meunier, F. ; Schnepf, A.FZJ* ; Vereecken, H.FZJ* ; Bouda, M. ; Javaux, M.FZJ*
From hydraulic root architecture models to macroscopic representations of root hydraulics in soil water flow and land surface models
Hydrology and earth system sciences 25(9), 4835 - 4860 (2021) [10.5194/hess-25-4835-2021]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Flores, O. (Corresponding author) ; Deckmyn, G. ; Curiel Yuste, J. ; Javaux, M.FZJ* ; Uvarov, A. ; van der Linde, S. ; De Vos, B. ; Vereecken, H.FZJ* ; Jiménez, J. ; Vinduskova, O. ; Schnepf, A.FZJ*
KEYLINK: towards a more integrative soil representation for inclusion in ecosystem scale models—II: model description, implementation and testing
PeerJ 9, e10707 - (2021) [10.7717/peerj.10707]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Bauke, S. L. (Corresponding author) ; Schnepf, A.FZJ* ; Sperber, C. ; Orlowski, N. ; Lewandowski, H. ; Selzner, T.FZJ* ; Tamburini, F. ; Amelung, W.FZJ*
Tracing uptake and translocation of phosphorus in wheat using oxygen isotopes and mathematical modelling
The new phytologist 230(5), 1883 - 1895 (2021) [10.1111/nph.17307]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Jorda, H. (Corresponding author)FZJ* ; Huber, K. ; Kunkel, A. ; Vanderborght, J.FZJ* ; Javaux, M.FZJ* ; Oberdörster, C. ; Hammel, K. ; Schnepf, A.FZJ*
Mechanistic modeling of pesticide uptake with a 3D plant architecture model
Environmental science and pollution research 28(39), 55678 - 55689 (2021) [10.1007/s11356-021-14878-3]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Morandage, S. ; Laloy, E. ; Schnepf, A.FZJ* ; Vereecken, H.FZJ* ; Vanderborght, J. (Corresponding author)FZJ*
Bayesian inference of root architectural model parameters from synthetic field data
Plant and soil 467(1-2), 67 - 89 (2021) [10.1007/s11104-021-05026-4]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Landl, M. (Corresponding author)FZJ* ; Haupenthal, A.FZJ* ; Leitner, D.FZJ* ; Kroener, E. ; Vetterlein, D. ; Bol, R.FZJ* ; Vereecken, H.FZJ* ; Vanderborght, J.FZJ* ; Schnepf, A.FZJ*
Simulating rhizodeposition patterns around growing and exuding root systems
In silico plants 3(2), diab028 (2021) [10.1093/insilicoplants/diab028]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Morandage, S. (Corresponding author) ; Vanderborght, J.FZJ* ; Zörner, M. ; Cai, G. ; Leitner, D.FZJ* ; Vereecken, H.FZJ* ; Schnepf, A.FZJ*
Root architecture development in stony soils
Vadose zone journal 20(4), e20133 (2021) [10.1002/vzj2.20133]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Schnepf, A. (Corresponding author)FZJ* ; He, X.
Rhizosphere 5 - shining light on the world beneath our feet
Plant and soil 461, 1-4 (2021) [10.1007/s11104-021-04942-9]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Landl, M. (Corresponding author)FZJ* ; Phalempin, M. ; Schlüter, S. ; Vetterlein, D. ; Vanderborght, J.FZJ* ; Kroener, E. ; Schnepf, A.FZJ*
Modeling the Impact of Rhizosphere Bulk Density and Mucilage Gradients on Root Water Uptake
Frontiers in agronomy 3, 622367 (2021) [10.3389/fagro.2021.622367]2021 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Moraes, M. T. d. (Corresponding author) ; Debiasi, H. ; Franchini, J. C. ; Mastroberti, A. A. ; Levien, R. ; Leitner, D. ; Schnepf, A.FZJ*
Soil compaction impacts soybean root growth in an Oxisol from subtropical Brazil
Soil & tillage research 200, 104611 - (2020) [10.1016/j.still.2020.104611]2020 Embargoed OpenAccess Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Wolff, J. (Corresponding author) ; Hofmann, D.FZJ* ; Koch, M. ; Bol, R.FZJ* ; Schnepf, A.FZJ* ; Amelung, W.FZJ*
Bioavailability and -accessibility of subsoil allocated 33P-labelled hydroxyapatite to wheat under different moisture supply
Scientific reports 10(1), 17140 (2020) [10.1038/s41598-020-74225-3]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Deckmyn, G. (Corresponding author) ; Flores, O. ; Mayer, M. ; Domene, X. ; Schnepf, A.FZJ* ; Kuka, K. ; Van Looy, K. ; Rasse, D. P. ; Briones, M. J. I. ; Barot, S. ; Berg, M. ; Vanguelova, E. ; Ostonen, I. ; Vereecken, H.FZJ* ; Suz, L. M. ; Frey, B. ; Frossard, A. ; Tiunov, A. ; Frouz, J. ; Grebenc, T. ; Öpik, M. ; Javaux, M.FZJ* ; Uvarov, A. ; Vindušková, O. ; Henning Krogh, P. ; Franklin, O. ; Jiménez, J. ; Curiel Yuste, J.
KEYLINK: towards a more integrative soil representation for inclusion in ecosystem scale models. I. review and model concept
PeerJ 8, e9750 - (2020) [10.7717/peerj.9750]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article De Bauw, P. (Corresponding author) ; Mai, T. H. ; Schnepf, A.FZJ* ; Merckx, R. ; Smolders, E. ; Vanderborght, J.FZJ*
A functional–structural model of upland rice root systems reveals the importance of laterals and growing root tips for phosphate uptake from wet and dry soils
Annals of botany 126(4), 789–806 (2020) [10.1093/aob/mcaa120]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Vetterlein, D. (Corresponding author) ; Carminati, A. ; Kögel-Knabner, I. ; Bienert, G. P. ; Smalla, K. ; Oburger, E. ; Schnepf, A.FZJ* ; Banitz, T. ; Tarkka, M. T. ; Schlüter, S.
Rhizosphere Spatiotemporal Organization–A Key to Rhizosphere Functions
Frontiers in agronomy 2, 8 (2020) [10.3389/fagro.2020.00008]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Schnepf, A. (Corresponding author)FZJ* ; Black, C. K. ; Couvreur, V. ; Delory, B. M. ; Doussan, C. ; Koch, A. ; Koch, T. ; Javaux, M.FZJ* ; Landl, M.FZJ* ; Leitner, D. ; Lobet, G.FZJ* ; Mai, T. H. ; Meunier, F. ; Petrich, L. ; Postma, J. A.FZJ* ; Priesack, E. ; Schmidt, V. ; Vanderborght, J.FZJ* ; Vereecken, H.FZJ* ; Weber, M.
Call for Participation: Collaborative Benchmarking of Functional-Structural Root Architecture Models. The Case of Root Water Uptake
Frontiers in Functional Plant Ecology 11, 316 (2020) [10.3389/fpls.2020.00316]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Zhou, X.-R.FZJ* ; Schnepf, A.FZJ* ; Vanderborght, J.FZJ* ; Leitner, D. ; Lacointe, A. ; Vereecken, H.FZJ* ; Lobet, G. (Corresponding author)FZJ*
CPlantBox, a whole plant modelling framework for the simulation of water and carbon related processes
In silico plants 2(1), diaa001 (2020) [10.1093/insilicoplants/diaa001]2020 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article de Moraes, M. T. ; Debiasi, H. ; Franchini, J. C. ; Bonetti, J. d. A. ; Levien, R. ; Schnepf, A. (Corresponding author)FZJ* ; Leitner, D.
Mechanical and Hydric Stress Effects on Maize Root System Development at Different Soil Compaction Levels
Frontiers in plant science 10, 1358 (2019) [10.3389/fpls.2019.01358]2019 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Landl, M. (Corresponding author)FZJ* ; Schnepf, A.FZJ* ; Uteau, D. ; Peth, S. ; Athmann, M. ; Kautz, T. ; Perkons, U. ; Vereecken, H.FZJ* ; Vanderborght, J.FZJ*
Modeling the Impact of Biopores on Root Growth and Root Water Uptake
Vadose zone journal 18(1), 0 - (2019) [10.2136/vzj2018.11.0196]2019 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Morandage, T. S. (Corresponding author)FZJ* ; Schnepf, A.FZJ* ; Javaux, M.FZJ* ; Vereecken, H.FZJ* ; Vanderborght, J.FZJ*
Parameter sensitivity analysis of a root system architecture model based on virtual field sampling
Plant and soil 438(1-2), 101-126 (2019) [10.1007/s11104-019-03993-3]2019 Files BibTeX | EndNote: XML, Text | RIS

Journal Article Mai, T. H. (Corresponding author)FZJ* ; Schnepf, A.FZJ* ; Vereecken, H.FZJ* ; Vanderborght, J.FZJ*
Continuum multiscale model of root water and nutrient uptake from soil with explicit consideration of the 3D root architecture and the rhizosphere gradients1
Plant and soil 439(1-2), 273–292 (2019) [10.1007/s11104-018-3890-4]2019 Files BibTeX | EndNote: XML, Text | RIS

Journal Article Passot, S. ; Couvreur, V. ; Meunier, F. ; Draye, X. ; Javaux, M.FZJ* ; Leitner, D. ; Pagès, L. ; Schnepf, A.FZJ* ; Vanderborght, J.FZJ* ; Lobet, G. (Corresponding author)FZJ*
Connecting the dots between computational tools to analyse soil-root water relations
The journal of experimental botany 70(9), 2345–2357 (2019) [10.1093/jxb/ery361]2019 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article de Sosa, L. L. (Corresponding author) ; Glanville, H. C. ; Marshall, M. R. ; Schnepf, A.FZJ* ; Cooper, D. M. ; Hill, P. W. ; Binley, A. ; Jones, D. L.
Stoichiometric constraints on the microbial processing of carbon with soil depth along a riparian hillslope
Biology and fertility of soils 54(8), 949 - 963 (2018) [10.1007/s00374-018-1317-2]2018 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Schnepf, A. (Corresponding author)FZJ* ; Huber, K.FZJ* ; Landl, M.FZJ* ; Meunier, F. ; Petrich, L. ; Schmidt, V.Extern*
Statistical Characterization of the Root System Architecture Model CRootBox
Vadose zone journal 17(1), (2018) [10.2136/vzj2017.12.0212]2018 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Cai, G. (Corresponding author) ; Morandage, S. ; Vanderborght, J.FZJ* ; Schnepf, A.FZJ* ; Vereecken, H.FZJ*
Erratum to “Construction of Minirhizotron Facilities for Investigating Root Zone Processes” and “Parameterization of Root Water Uptake Models Considering Dynamic Root Distributions and Water Uptake Compensation”
Vadose zone journal 17(1), (2018) [10.2136/vzj2017.11.0201]2018 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Landl, M. (Corresponding author)FZJ* ; Schnepf, A.FZJ* ; Vanderborght, J.FZJ* ; Bengough, A. G. ; Bauke, S. L. ; Lobet, G.FZJ* ; Bol, R.FZJ* ; Vereecken, H.FZJ*
Measuring root system traits of wheat in 2D images to parameterize 3D root architecture models
Plant and soil 425(1-2), 457 - 477 (2018) [10.1007/s11104-018-3595-8]2018 Embargoed OpenAccess Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Cai, G. (Corresponding author) ; Vanderborght, J.FZJ* ; Langensiepen, M. ; Schnepf, A.FZJ* ; Hüging, H. ; Vereecken, H.FZJ*
Root growth, water uptake, and sap flow of winter wheat in response to different soil water conditions
Hydrology and earth system sciences 22(4), 2449 - 2470 (2018) [10.5194/hess-22-2449-2018]2018 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article de Moraes, M. T. (Corresponding author) ; Bengough, A. G. ; Debiasi, H. ; Franchini, J. C. ; Levien, R. ; Schnepf, A.FZJ* ; Leitner, D.
Mechanistic framework to link root growth models with weather and soil physical properties, including example applications to soybean growth in Brazil
Plant and soil 428(1-2), 67-92 (2018) [10.1007/s11104-018-3656-z]2018 Files BibTeX | EndNote: XML, Text | RIS

Journal Article Schnepf, A. (Corresponding author)FZJ* ; Leitner, D. ; Landl, M.FZJ* ; Lobet, G.FZJ* ; Mai, T. H.FZJ* ; Morandage, S.FZJ* ; Sheng, C.FZJ* ; Zörner, M.FZJ* ; Vanderborght, J.FZJ* ; Vereecken, H.FZJ*
CRootBox: a structural–functional modelling framework for root systems
Annals of botany 121(5), 1033 - 1053 (2018) [10.1093/aob/mcx221]2018 Files BibTeX | EndNote: XML, Text | RIS

Report/Conference Presentation (Other) Schnepf, A. (Corresponding author)FZJ* ; Javaux, M.FZJ* ; Vanderborght, J.FZJ*
Comparing root architectural models
2017European Geoscience Union General Assembly 2017, ViennaVienna, Austria, 27 Apr 2017 - 27 Apr 20172017-04-272017-04-27 BibTeX | EndNote: XML, Text | RIS

Journal Article Bauke, S. L. (Corresponding author) ; Landl, M.FZJ* ; Koch, M.FZJ* ; Hofmann, D.FZJ* ; Nagel, K.FZJ* ; Siebers, N.FZJ* ; Schnepf, A.FZJ* ; Amelung, W.FZJ*
Macropore effects on phosphorus acquisition by wheat roots – a rhizotron study
Plant and soil 416(1-2), 67–82 (2017) [10.1007/s11104-017-3194-0]2017 Files BibTeX | EndNote: XML, Text | RIS

Journal Article Landl, M. (Corresponding author)FZJ* ; Huber, K.FZJ* ; Schnepf, A.FZJ* ; Vanderborght, J.FZJ* ; Javaux, M.FZJ* ; Glyn Bengough, A. ; Vereecken, H.FZJ*
A new model for root growth in soil with macropores
Plant and soil 415(1-2), 99–116 (2016) [10.1007/s11104-016-3144-2]2016 Files BibTeX | EndNote: XML, Text | RIS

Journal Article Glanville, H. C. (Corresponding author) ; Hill, P. W. ; Schnepf, A.FZJ* ; Oburger, E. ; Jones, D. L.
Combined use of empirical data and mathematical modelling to better estimate the microbial turnover of isotopically labelled carbon substrates in soil
Soil biology & biochemistry 94, 154 - 168 (2016) [10.1016/j.soilbio.2015.11.016]2016 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Schnepf, A.FZJ* ; Leitner, D. ; Schweiger, P. F. ; Scholl, P. ; Jansa, J.
L-System model for the growth of arbuscular mycorrhizal fungi, both within and outside of their host roots
Interface 13(117), 20160129 - (2016) [10.1098/rsif.2016.0129]2016 BibTeX | EndNote: XML, Text | RIS

Journal Article Vereecken, H. (Corresponding author)FZJ* ; Schnepf, A.FZJ* ; Hopmans, J. W. ; Javaux, M.FZJ* ; Or, D. ; Roose, T. ; Vanderborght, J.FZJ* ; Young, M. H. ; Amelung, W.FZJ* ; Aitkenhead, M. ; Allison, S. D. ; Assouline, S. ; Baveye, P. ; Berli, M. ; Brüggemann, N.FZJ* ; Finke, P. ; Flury, M. ; Gaiser, T. ; Govers, G. ; Ghezzehei, T. ; Hallett, P. ; Hendricks-Franssen, H.-J.FZJ* ; Heppell, J. ; Horn, R. ; Huisman, J. A.FZJ* ; Jacques, D. ; Jonard, F.FZJ* ; Kollet, S.FZJ* ; Lafolie, F. ; Lamorski, K. ; Leitner, D. ; McBratney, A. ; Minasny, B. ; Montzka, C.FZJ* ; Nowak, W. ; Pachepsky, Y. ; Padarian, J. ; Romano, N. ; Roth, K. ; Rothfuss, Y.FZJ* ; Rowe, E. C. ; Schwen, A. ; Šimůnek, J. ; Tiktak, A. ; Van Dam, J. ; van der Zee, S. E. A. T. M. ; Vogel, H. J. ; Vrugt, J. A. ; Wöhling, T. ; Young, I. M.
Modeling Soil Processes: Review, Key Challenges, and New Perspectives
Vadose zone journal 15(5), (2016) [10.2136/vzj2015.09.0131]2016 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Gryndler, M. (Corresponding author) ; Beskid, O. ; Hršelová, H. ; Bukovská, P. ; Hujslová, M. ; Gryndlerová, H. ; Konvalinková, T. ; Schnepf, A.FZJ* ; Sochorová, L. ; Jansa, J.
Mutabilis in mutabili: Spatiotemporal dynamics of a truffle colony in soil
Soil biology & biochemistry 90, 62 - 70 (2015) [10.1016/j.soilbio.2015.07.025]2015 Files BibTeX | EndNote: XML, Text | RIS

Journal Article Lobet, G. ; Pound, M. P. ; Diener, J. ; Pradal, C. ; Draye, X. (Corresponding author) ; Godin, C. ; Javaux, M.FZJ* ; Leitner, D. ; Meunier, F. ; Nacry, P. ; Pridmore, T. P. ; Schnepf, A.FZJ*
Root System Markup Language: Toward a Unified Root Architecture Description Language
Plant physiology 167(3), 617 - 627 (2015) [10.1104/pp.114.253625]2015 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Santner, J. (Corresponding author) ; Kreuzeder, A. ; Schnepf, A.FZJ* ; Wenzel, W. W.
Numerical Evaluation of Lateral Diffusion Inside Diffusive Gradients in Thin Films Samplers
Environmental science & technology 49(10), 6109 - 6116 (2015) [10.1021/acs.est.5b00134]2015 Files Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

Journal Article Leitner, D. (Corresponding Author) ; Meunier, F. ; Bodner, G. ; Javaux, M.FZJ* ; Schnepf, A.FZJ*
Impact of contrasted maize root traits at flowering on water stress tolerance â€“ A simulation study
Field crops research 165, 125 - 137 (2014) [10.1016/j.fcr.2014.05.009]2014 Files BibTeX | EndNote: XML, Text | RIS

Journal Article Leitner, D. (Corresponding author) ; Felderer, B. ; Vontobel, P. ; Schnepf, A.FZJ*
Recovering root system traits using image analysis - Exemplified by 2-dimensional neutron radiography images of lupine
Plant physiology 0, 1-49 (2013) [10.1104/pp.113.227892]2013 Files Fulltext BibTeX | EndNote: XML, Text | RIS

Journal Article Dunbabin, V. M. (Corresponding author) ; Postma, J. A.FZJ* ; Schnepf, A.FZJ* ; Pagès, L. ; Javaux, M.FZJ* ; Wu, L. ; Leitner, D. ; Chen, Y. L. ; Rengel, Z. ; Diggle, A. J.
Modelling root–soil interactions using three–dimensional models of root growth, architecture and function
Plant and soil 372(1-2), 93 - 124 (2013) [10.1007/s11104-013-1769-y]2013 Files BibTeX | EndNote: XML, Text | RIS

Letzte Änderung: 12.12.2024