Publications 2025

Publications of IBG-4 in 2025

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TopCysteineDB: A Cysteinome-wide Database Integrating Structural and Chemoproteomics Data for Cysteine Ligandability Prediction
Journal of molecular biology 437(15), 169196 - () [10.1016/j.jmb.2025.169196] OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Haplotype-resolved genomeassembly of the tetraploid potatocultivar Désirée
Advances in data science and adaptive analysis: theory and applications 12, 1044 () [10.34734/FZJ-2025-02841] OpenAccess  Download fulltext Files  Download fulltextFulltext BibTeX | EndNote: XML, Text | RIS

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Identification of non-charged 7.44 analogs interacting with the NHR2 domain of RUNX1-ETO with improved antiproliferative effect in RUNX-ETO positive cells
Scientific reports 15(1), 17720 () [10.1038/s41598-025-02422-z] OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Characterization of a C-methyltransferase from Streptomyces griseoviridis – crystal structure, mechanism, and substrate scope
Chemical science 16(10), 4519 - 4527 () [10.1039/D4SC07300B] OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Human chitinases and chitinase-like proteins as emerging drug targets – a medicinal chemistry perspective
RSC medicinal chemistry 16(6), 2388-2402 () [10.1039/D4MD01050G] OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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PyPE_RESP: A Tool to Facilitate and Standardize Derivation of RESP Charges
Journal of chemical information and modeling 65(9), 4251 - 4256 () [10.1021/acs.jcim.5c00041] Embargoed OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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A platform for the biomedical application of large language models
Nature biotechnology 43(2), 166 - 169 () [10.1038/s41587-024-02534-3] OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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CD63 as novel target for nanoemulsion-based 19 F MRI imaging and drug delivery to activated cardiac fibroblasts
Theranostics 15(1), 1 - 18 () [10.7150/thno.96990] OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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TopEC: prediction of Enzyme Commission classes by 3D graph neural networks and localized 3D protein descriptor
Nature Communications 16(1), 2737 () [10.1038/s41467-025-57324-5] OpenAccess  Download fulltext Files  Download fulltextOpenAccess BibTeX | EndNote: XML, Text | RIS

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Cyclophilin A Regulates Tripartite Motif 5 Alpha Restriction of HIV-1
International journal of molecular sciences 26(2), 495 - () [10.3390/ijms26020495] OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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The mycotoxin Beauvericin is an uncompetitive inhibitor of Cathepsin B
Protein science 34(6), e70173 () [10.1002/pro.70173] OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Plant sperm cell sequencing for genome phasing and determination of meiotic crossover points
Nature protocols 20, 690–708 () [10.1038/s41596-024-01063-2]  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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Molecular mechanisms underlying the early steps of floral initiation in seasonal flowering genotypes of cultivated strawberry
Frontiers in plant science 16, NA () [10.3389/fpls.2025.1563658] OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

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A full genome assembly reveals drought stress effects on gene expression and metabolite profiles in blackcurrant ( Ribes nigrum L.)
Horticulture research 12(2), uhae313 () [10.1093/hr/uhae313] OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS

Last Modified: 11.03.2025