http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Bonus, M. ; Greb, J. ; Majmudar, J. D. ; Boehm, M. ; Korczynska, M. ; Nazemi, A. ; Mathiowetz, A. M. ; Gohlke, H. (Corresponding author)FZJ*
TopCysteineDB: A Cysteinome-wide Database Integrating Structural and Chemoproteomics Data for Cysteine Ligandability Prediction
Journal of molecular biology 437(15), 169196 - (2025) [10.1016/j.jmb.2025.169196]2025   Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Godec, T. (Corresponding author) ; Beier, S.FZJ* ; Rodriguez-Granados, N. ; Sasidharan, R. ; Abdelhakim, L. ; Teige, M. ; Usadel, B.FZJ* ; Gruden, K. ; Petek, M.
Haplotype-resolved genomeassembly of the tetraploid potatocultivar Désirée
Advances in data science and adaptive analysis: theory and applications 12, 1044 (2025) [10.34734/FZJ-2025-02841]2025   Files  Fulltext BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Gopalswamy, M.FZJ* ; Bickel, D. ; Dienstbier, N. ; Tu, J.-W. ; Vogt, M. ; Schott-Verdugo, S.FZJ* ; Bhatia, S. ; Etzkorn, M.FZJ* ; Gohlke, H. (Corresponding author)FZJ*
Identification of non-charged 7.44 analogs interacting with the NHR2 domain of RUNX1-ETO with improved antiproliferative effect in RUNX-ETO positive cells
Scientific reports 15(1), 17720 (2025) [10.1038/s41598-025-02422-z]2025   Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Haase, M.FZJ* ; Weiergräber, O. H.FZJ* ; David, B.FZJ* ; Pfirmann, E. L.FZJ* ; Paschold, B.FZJ* ; Gohlke, H. (Corresponding author)FZJ* ; Pietruszka, J. (Corresponding author)
Characterization of a C-methyltransferase from Streptomyces griseoviridis – crystal structure, mechanism, and substrate scope
Chemical science 16(10), 4519 - 4527 (2025) [10.1039/D4SC07300B]2025   Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Kurç, Ö. ; Rähse, N. ; Gohlke, H. (Corresponding author)FZJ* ; Cramer, J. (Corresponding author)
Human chitinases and chitinase-like proteins as emerging drug targets – a medicinal chemistry perspective
RSC medicinal chemistry 16(6), 2388-2402 (2025) [10.1039/D4MD01050G]2025   Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Lapsien, M. ; Bonus, M. ; Gahan, L. ; Raguin, A. ; Gohlke, H. (Corresponding author)FZJ*
PyPE_RESP: A Tool to Facilitate and Standardize Derivation of RESP Charges
Journal of chemical information and modeling 65(9), 4251 - 4256 (2025) [10.1021/acs.jcim.5c00041]2025   Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Lobentanzer, S. (Corresponding author) ; Feng, S. ; Bruderer, N. ; Maier, A. ; Díaz, A. G. ; Strange, A. ; Ismail, A. ; Kulaga, A. ; Dugourd, A. ; Zdrazil, B. ; Chassagnol, B. ; Pommier, C. ; Lucarelli, D. ; McDonagh, E. M. ; Verkinderen, E. ; Delgado-Chaves, F. M. ; Fuellen, G. ; Sonntag, H. ; Menger, J. ; Christiaen, L. ; Geistlinger, L. ; Zetsche, L. Z. ; Engelke, M. ; McNutt, M. ; Harrison, M. ; Hizli, M. ; Usanov, N. ; Baracho, P. ; Beier, S.FZJ* ; Boeing, S. ; Muranen, T. A. ; Le, T. T. ; Dragan, V. ; Zhou, X.-R.FZJ* ; Nielsen-Tehranchian, Y. ; Song, Y. ; Wang, C. ; Baumbach, J. ; Abreu-Vicente, J. ; Krehl, N. ; Ma, Q. ; Lemberger, T. ; Saez-Rodriguez, J. (Corresponding author)
A platform for the biomedical application of large language models
Nature biotechnology 43(2), 166 - 169 (2025) [10.1038/s41587-024-02534-3]2025   Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Martínez, A. A. E. ; Bergmann, A. K. ; Tellkamp, F. ; Schott-Verdugo, S.FZJ* ; Bouvain, P. ; Steinhausen, J. ; Bahr, J. ; Kmietczyk, V. ; Bencun, M. ; Flögel, U. ; Distler, J. H. W. ; Krueger, M. ; Völkers, M. ; Czekelius, C. ; Gohlke, H.FZJ* ; Temme, S. ; Hesse, J. ; Schrader, J.
CD63 as novel target for nanoemulsion-based 19 F MRI imaging and drug delivery to activated cardiac fibroblasts
Theranostics 15(1), 1 - 18 (2025) [10.7150/thno.96990]2025   Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Schwacke, R.FZJ* ; Bolger, M.FZJ* ; Usadel, B.FZJ*
PubPlant -a continuously updated online resource for sequenced and published plant genomes
Frontiers in plant science 16, NA (2025) [10.3389/fpls.2025.1603547]2025   Files  Fulltext BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article van der Weg, K.FZJ* ; Merdivan, E. ; Piraud, M. ; Gohlke, H. (Corresponding author)FZJ*
TopEC: prediction of Enzyme Commission classes by 3D graph neural networks and localized 3D protein descriptor
Nature Communications 16(1), 2737 (2025) [10.1038/s41467-025-57324-5]2025   Files  OpenAccess BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Wang, T. ; Becker, D.FZJ* ; Twizerimana, A. P. ; Luedde, T. ; Gohlke, H. (Corresponding author)FZJ* ; Münk, C. (Corresponding author)
Cyclophilin A Regulates Tripartite Motif 5 Alpha Restriction of HIV-1
International journal of molecular sciences 26(2), 495 - (2025) [10.3390/ijms26020495]2025   Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Yang, X. ; Cea-Medina, P. ; Gopalswamy, M.FZJ* ; Vaidya, A. ; Schavier, S. ; Oltzen, S. ; Moßner, S. ; Huang, A. ; Qi, J. ; Hölken, J. M. ; Teusch, N. ; Floss, D. M. ; Uhrberg, M. ; Gohlke, H. (Corresponding author)FZJ* ; Scheu, S. (Corresponding author)
The mycotoxin Beauvericin is an uncompetitive inhibitor of Cathepsin B
Protein science 34(6), e70173 (2025) [10.1002/pro.70173]2025   Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Zhang, W. ; Tariq, A. ; Jia, X. ; Yan, J. ; Fernie, A. R. (Corresponding author) ; Usadel, B. (Corresponding author)FZJ* ; Wen, W. (Corresponding author)
Plant sperm cell sequencing for genome phasing and determination of meiotic crossover points
Nature protocols 20, 690–708 (2025) [10.1038/s41596-024-01063-2]2025   Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Ziegler, F. (Corresponding author)FZJ* ; Gaston, A. ; Guy, K. ; Devers, M. ; Krüger, E. ; Brauksiepe, B. ; Eimert, K. ; Osorio, S. ; Denoyes, B. (Corresponding author) ; Usadel, B. (Corresponding author)FZJ*
Molecular mechanisms underlying the early steps of floral initiation in seasonal flowering genotypes of cultivated strawberry
Frontiers in plant science 16, NA (2025) [10.3389/fpls.2025.1563658]2025   Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Ziegler, F. M. R. (Corresponding author)FZJ* ; Rosenthal, V. ; Vallarino, J. G. ; Genzel, F.FZJ* ; Spettmann, S.FZJ* ; Seliga, Ł. ; Keller-Przybyłkowicz, S. ; Munnes, L. ; Sønsteby, A. ; Osorio, S. ; Usadel, B. (Corresponding author)FZJ*
A full genome assembly reveals drought stress effects on gene expression and metabolite profiles in blackcurrant ( Ribes nigrum L.)
Horticulture research 12(2), uhae313 (2025) [10.1093/hr/uhae313]2025   Files BibTeX | EndNote: XML, Text | RIS